Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22297 results

2OTN
DownloadVisualize
BU of 2otn by Molmil
Crystal structure of the catalytically active form of diaminopimelate epimerase from Bacillus anthracis
Descriptor: Diaminopimelate epimerase
Authors:Matho, M.H, Fukuda, K, Santelli, E, Jaroszewski, L, Liddington, R.C, Roper, D.
Deposit date:2007-02-08
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure and inhibition of a catalytically active form of diaminopimelate epimerase (DapF)from Bacillus anthracis
To be Published
2Q00
DownloadVisualize
BU of 2q00 by Molmil
Crystal structure of the P95883_SULSO protein from Sulfolobus solfataricus. NESG target SsR10.
Descriptor: Orf c02003 protein
Authors:Vorobiev, S.M, Chen, Y, Seetharaman, J, Wang, D, Owens, L, Ma, L.-C, Cunningham, K, Fang, Y, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-05-18
Release date:2007-05-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the P95883_SULSO protein from Sulfolobus solfataricus.
To be Published
7NWN
DownloadVisualize
BU of 7nwn by Molmil
A carbohydrate binding module family 9 (CBM9) from Caldicellulsiruptor kristjanssonii
Descriptor: 1,2-ETHANEDIOL, Beta-xylanase, CALCIUM ION, ...
Authors:Krska, D, Mazurkewich, S, Navarro Poulsen, J, Larsbrink, J, Lo Leggio, L.
Deposit date:2021-03-17
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural and Functional Analysis of a Multimodular Hyperthermostable Xylanase-Glucuronoyl Esterase from Caldicellulosiruptor kristjansonii .
Biochemistry, 60, 2021
7NWQ
DownloadVisualize
BU of 7nwq by Molmil
A carbohydrate binding module family 9 (CBM9) from Caldicellulosiruptor kristjanssonii in complex with cellotriose
Descriptor: 1,2-ETHANEDIOL, Beta-xylanase, CALCIUM ION, ...
Authors:Krska, D, Mazurkewich, S, Navarro Poulsen, J, Larsbrink, J, Lo Leggio, L.
Deposit date:2021-03-17
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.231 Å)
Cite:Structural and Functional Analysis of a Multimodular Hyperthermostable Xylanase-Glucuronoyl Esterase from Caldicellulosiruptor kristjansonii .
Biochemistry, 60, 2021
7OGL
DownloadVisualize
BU of 7ogl by Molmil
A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation. apo-PNPase
Descriptor: Polyribonucleotide nucleotidyltransferase
Authors:Dendooven, T, Sinha, D, Roesoleva, A, Cameron, T.A, De Lay, N, Luisi, B.F, Bandyra, K.
Deposit date:2021-05-06
Release date:2021-07-07
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation.
Mol.Cell, 81, 2021
7OGM
DownloadVisualize
BU of 7ogm by Molmil
A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation. PNPase-3'ETS(leuZ)-Hfq
Descriptor: 3'ETS(LeuZ), Polyribonucleotide nucleotidyltransferase, RNA-binding protein Hfq
Authors:Dendooven, T, Sinha, D, Roesoleva, A, Cameron, T.A, De Lay, N, Luisi, B.F, Bandyra, K.
Deposit date:2021-05-06
Release date:2021-07-07
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation.
Mol.Cell, 81, 2021
7OGK
DownloadVisualize
BU of 7ogk by Molmil
A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation. PNPase-3'ETS(leuZ)
Descriptor: 3'ETS(LeuZ), Polyribonucleotide nucleotidyltransferase
Authors:Dendooven, T, Sinha, D, Roesoleva, A, Cameron, T.A, De Lay, N, Luisi, B.F, Bandyra, K.
Deposit date:2021-05-06
Release date:2021-07-07
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation.
Mol.Cell, 81, 2021
1B6K
DownloadVisualize
BU of 1b6k by Molmil
HIV-1 PROTEASE COMPLEXED WITH MACROCYCLIC PEPTIDOMIMETIC INHIBITOR 5
Descriptor: N-[3-(8-SEC-BUTYL-7,10-DIOXO-2-OXA-6,9-DIAZA-BICYCLO[11.2.2]HEPTADECA-1(16),13(17),14- TRIEN-11-YLAMINO)-2-HYDROXY-1-(4-HYDROXY-BENZYL)-PROPYL]-3-METHYL-2- (2-OXO-PYRROLIDIN-1-YL)-BUTYRAMIDE, RETROPEPSIN, SULFATE ION
Authors:Martin, J.L, Begun, J, Schindeler, A, Wickramasinghe, W.A, Alewood, D, Alewood, P.F, Bergman, D.A, Brinkworth, R.I, Abbenante, G, March, D.R, Reid, R.C, Fairlie, D.P.
Deposit date:1999-01-17
Release date:2000-01-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular recognition of macrocyclic peptidomimetic inhibitors by HIV-1 protease.
Biochemistry, 38, 1999
1AW2
DownloadVisualize
BU of 1aw2 by Molmil
TRIOSEPHOSPHATE ISOMERASE OF VIBRIO MARINUS
Descriptor: SULFATE ION, TRIOSEPHOSPHATE ISOMERASE
Authors:Maes, D, Zeelen, J.P, Wierenga, R.K.
Deposit date:1997-10-09
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Triose-phosphate isomerase (TIM) of the psychrophilic bacterium Vibrio marinus. Kinetic and structural properties.
J.Biol.Chem., 273, 1998
1AZV
DownloadVisualize
BU of 1azv by Molmil
FAMILIAL ALS MUTANT G37R CUZNSOD (HUMAN)
Descriptor: COPPER (II) ION, COPPER/ZINC SUPEROXIDE DISMUTASE, ZINC ION
Authors:Hart, P.J, Liu, H, Pellegrini, M, Nersissian, A.M, Gralla, E.B, Valentine, J.S, Eisenberg, D.
Deposit date:1997-11-21
Release date:1998-02-25
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Subunit asymmetry in the three-dimensional structure of a human CuZnSOD mutant found in familial amyotrophic lateral sclerosis.
Protein Sci., 7, 1998
7NTN
DownloadVisualize
BU of 7ntn by Molmil
The structure of RRM domain of human TRMT2A at 2 A resolution
Descriptor: CHLORIDE ION, SODIUM ION, SULFATE ION, ...
Authors:Davydova, E, Janowski, R, Witzenberger, M, Niessing, D.
Deposit date:2021-03-10
Release date:2022-01-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.016 Å)
Cite:Small-molecule modulators of TRMT2A decrease PolyQ aggregation and PolyQ-induced cell death.
Comput Struct Biotechnol J, 20, 2022
2PSB
DownloadVisualize
BU of 2psb by Molmil
Crystal structure of YerB protein from Bacillus subtilis. NorthEast Structural Genomics target SR586
Descriptor: YerB protein
Authors:Seetharaman, J, Chen, Y, Forouhar, F, Wang, D, Fang, Y, Cunningham, K, Ma, L.-C, Xia, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-05-04
Release date:2007-05-15
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of YerB protein from Bacillus subtilis.
To be Published
7NWW
DownloadVisualize
BU of 7nww by Molmil
CspA-27 cotranslational folding intermediate 1
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Samatova, E, Macher, M, Liutkute, M, Gil-Carton, D, Novacek, J, Valle, M, Rodnina, M.V.
Deposit date:2021-03-17
Release date:2022-01-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:A switch from alpha-helical to beta-strand conformation during co-translational protein folding.
Embo J., 41, 2022
7LNM
DownloadVisualize
BU of 7lnm by Molmil
Ornithine Aminotransferase (OAT) cocrystallized with its inactivator - (1S,3S)-3-amino-4-(difluoromethylene)cyclopentene-1-carboxylic acid
Descriptor: (1~{R},3~{S},4~{R})-3-methyl-4-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]cyclopentane-1-carboxylic acid, Ornithine aminotransferase, mitochondrial
Authors:Butrin, A, Catlin, D, Zhu, W, Liu, D, Silverman, R.
Deposit date:2021-02-07
Release date:2021-08-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Remarkable and Unexpected Mechanism for ( S )-3-Amino-4-(difluoromethylenyl)cyclohex-1-ene-1-carboxylic Acid as a Selective Inactivator of Human Ornithine Aminotransferase.
J.Am.Chem.Soc., 143, 2021
7OIF
DownloadVisualize
BU of 7oif by Molmil
CspA-27 cotranslational folding intermediate 2
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Samatova, E, Macher, M, Liutkute, M, Gil-Carton, D, Novacek, J, Valle, M, Rodnina, M.V.
Deposit date:2021-05-11
Release date:2022-01-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A switch from alpha-helical to beta-strand conformation during co-translational protein folding.
Embo J., 41, 2022
7OIG
DownloadVisualize
BU of 7oig by Molmil
CspA-27 cotranslational folding intermediate 3
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Samatova, E, Macher, M, Liutkute, M, Gil-Carton, D, Novacek, J, Valle, M, Rodnina, M.V.
Deposit date:2021-05-11
Release date:2022-01-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A switch from alpha-helical to beta-strand conformation during co-translational protein folding.
Embo J., 41, 2022
1B79
DownloadVisualize
BU of 1b79 by Molmil
N-TERMINAL DOMAIN OF DNA REPLICATION PROTEIN DNAB
Descriptor: DnaB Helicase
Authors:Fass, D, Bogden, C.E, Berger, J.M.
Deposit date:1999-01-28
Release date:1999-06-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the N-terminal domain of the DnaB hexameric helicase.
Structure Fold.Des., 7, 1999
7NXH
DownloadVisualize
BU of 7nxh by Molmil
Structure of SARS-CoV2 NSP5 (3C-like proteinase) determined in-house
Descriptor: 3C-like proteinase
Authors:Calderone, V, Grifagni, D, Cantini, F, Fragai, M, Banci, L.
Deposit date:2021-03-18
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:SARS-CoV-2 M pro inhibition by a zinc ion: structural features and hints for drug design.
Chem.Commun.(Camb.), 57, 2021
1B8A
DownloadVisualize
BU of 1b8a by Molmil
ASPARTYL-TRNA SYNTHETASE
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, PROTEIN (ASPARTYL-TRNA SYNTHETASE)
Authors:Schmitt, E, Moulinier, L, Thierry, J.-C, Moras, D.
Deposit date:1999-01-27
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of aspartyl-tRNA synthetase from Pyrococcus kodakaraensis KOD: archaeon specificity and catalytic mechanism of adenylate formation.
EMBO J., 17, 1998
7OII
DownloadVisualize
BU of 7oii by Molmil
CspA-70 cotranslational folding intermediate 2
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Samatova, E, Macher, M, Liutkute, M, Gil-Carton, D, Novacek, J, Valle, M, Rodnina, M.V.
Deposit date:2021-05-11
Release date:2022-01-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A switch from alpha-helical to beta-strand conformation during co-translational protein folding.
Embo J., 41, 2022
7NTO
DownloadVisualize
BU of 7nto by Molmil
The structure of RRM domain of human TRMT2A at 1.23 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ...
Authors:Witzenberger, M, Janowski, R, Davydova, E, Niessing, D.
Deposit date:2021-03-10
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Small-molecule modulators of TRMT2A decrease PolyQ aggregation and PolyQ-induced cell death.
Comput Struct Biotechnol J, 20, 2022
1AOE
DownloadVisualize
BU of 1aoe by Molmil
CANDIDA ALBICANS DIHYDROFOLATE REDUCTASE COMPLEXED WITH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE (NADPH) AND 1,3-DIAMINO-7-(1-ETHYEPROPYE)-7H-PYRRALO-[3,2-F]QUINAZOLINE (GW345)
Descriptor: 7-(1-ETHYL-PROPYL)-7H-PYRROLO-[3,2-F]QUINAZOLINE-1,3-DIAMINE, DIHYDROFOLATE REDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Whitlow, M, Howard, A.J, Stewart, D.
Deposit date:1997-07-02
Release date:1998-01-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray crystallographic studies of Candida albicans dihydrofolate reductase. High resolution structures of the holoenzyme and an inhibited ternary complex.
J.Biol.Chem., 272, 1997
1AOL
DownloadVisualize
BU of 1aol by Molmil
FRIEND MURINE LEUKEMIA VIRUS RECEPTOR-BINDING DOMAIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GP70, ZINC ION
Authors:Fass, D, Davey, R.A, Hamson, C.A, Kim, P.S, Cunningham, J.M, Berger, J.M.
Deposit date:1997-07-08
Release date:1997-10-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a murine leukemia virus receptor-binding glycoprotein at 2.0 angstrom resolution.
Science, 277, 1997
1B6X
DownloadVisualize
BU of 1b6x by Molmil
3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE GUANINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS, 4 STRUCTURES
Descriptor: 5'-D(*CP*GP*TP*AP*CP*(EDC)P*CP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3'
Authors:Cullinan, D, Johnson, F, Grollman, A.P, Eisenberg, M, De Los Santos, C.
Deposit date:1999-01-19
Release date:1999-01-27
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Solution structure of a DNA duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite 2'-deoxyguanosine.
Biochemistry, 36, 1997
2PL2
DownloadVisualize
BU of 2pl2 by Molmil
Crystal structure of TTC0263: a thermophilic TPR protein in Thermus thermophilus HB27
Descriptor: Hypothetical conserved protein TTC0263
Authors:Lim, H, Kim, K, Han, D, Oh, J.
Deposit date:2007-04-18
Release date:2008-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of TTC0263, a thermophilic TPR protein from Thermus thermophilus HB27.
Mol.Cell, 24, 2007

223790

数据于2024-08-14公开中

PDB statisticsPDBj update infoContact PDBjnumon