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PDB: 52974 results

6PCH
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BU of 6pch by Molmil
E. coli 50S ribosome bound to compound 21
Descriptor: (3R,4R,5E,10E,12E,14S,26aR)-14-hydroxy-12-methyl-3-(propan-2-yl)-4-(prop-2-en-1-yl)-8,9,14,15,24,25,26,26a-octahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosine-1,7,16,22(4H,17H)-tetrone, 23S ribosomal RNA, 50S ribosomal protein L13, ...
Authors:Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
Deposit date:2019-06-17
Release date:2020-06-17
Last modified:2020-10-07
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Synthetic group A streptogramin antibiotics that overcome Vat resistance.
Nature, 586, 2020
8PUZ
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BU of 8puz by Molmil
Crystal structure of tropomyosin (Cdc8) cables, Conformer 1
Descriptor: Tropomyosin
Authors:Reinke, P.Y.A, Zahn, M, Fedorov, R, Manstein, D.J.
Deposit date:2023-07-17
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Atomic structure of cdc8 tropomyosin cables
To Be Published
4V4Y
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BU of 4v4y by Molmil
Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Jenner, L, Yusupova, G, Rees, B, Moras, D, Yusupov, M.
Deposit date:2006-06-27
Release date:2014-07-09
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Structural basis for messenger RNA movement on the ribosome.
Nature, 444, 2006
8PRD
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BU of 8prd by Molmil
The structure of nvBagel2
Descriptor: Cell surface protein
Authors:Vandebroek, L, Voet, A.R.D, Lee, X.Y.
Deposit date:2023-07-12
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:The structure of v13Bagel2
To Be Published
1TGX
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BU of 1tgx by Molmil
X-RAY STRUCTURE AT 1.55 A OF TOXIN GAMMA, A CARDIOTOXIN FROM NAJA NIGRICOLLIS VENOM. CRYSTAL PACKING REVEALS A MODEL FOR INSERTION INTO MEMBRANES
Descriptor: CHLORIDE ION, GAMMA-CARDIOTOXIN
Authors:Bilwes, A, Rees, B, Moras, D.
Deposit date:1993-11-24
Release date:1994-04-30
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:X-ray structure at 1.55 A of toxin gamma, a cardiotoxin from Naja nigricollis venom. Crystal packing reveals a model for insertion into membranes.
J.Mol.Biol., 239, 1994
8PRO
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BU of 8pro by Molmil
The structure of nvBagel2 binding the P8W48O184 polyoxometalate
Descriptor: Cell surface protein, P8W48O184 polyoxometalate
Authors:Vandebroek, L, Voet, A.R.D, Lee, X.Y.
Deposit date:2023-07-12
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of v13Bagel2
To Be Published
1JXN
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BU of 1jxn by Molmil
Crystal Structure of the Lectin I from Ulex europaeus in complex with the methyl glycoside of alpha-L-fucose
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, CALCIUM ION, MANGANESE (II) ION, ...
Authors:Audette, G.F, Olson, D.J.H, Ross, A.R.S, Quail, J.W, Delbaere, L.T.J.
Deposit date:2001-09-07
Release date:2002-12-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Examination of the Structural Basis for O(H) Blood Group Specificity by Ulex europaeus Lectin I
Can.J.Chem., 80, 2002
6VRM
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BU of 6vrm by Molmil
T cell receptor-p53-HLA-A2 complex
Descriptor: Beta-2-microglobulin, Cellular tumor antigen p53 peptide, MHC class I antigen, ...
Authors:Wu, D, Gallagher, D.T, Gowthaman, R, Pierce, B.G, Mariuzza, R.A.
Deposit date:2020-02-08
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
2I5G
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BU of 2i5g by Molmil
Crystal strcuture of amidohydrolase from Pseudomonas aeruginosa
Descriptor: amidohydrolase
Authors:Min, T, Sauder, J.M, Wasserman, S.R, Smith, D, Burley, S.K, Shapiro, L, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-08-24
Release date:2006-09-05
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of amidohydrolase from Pseudomonas aeruginosa
To be Published
5DDO
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BU of 5ddo by Molmil
Structural and Dynamic Basis for Low Affinity-High Selectivity Binding of L-glutamine by the Gln-riboswitch
Descriptor: L-glutamine riboswitch (58-MER), U1 small nuclear ribonucleoprotein A
Authors:Ren, A, Patel, D.
Deposit date:2015-08-25
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
Cell Rep, 13, 2015
1TLL
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BU of 1tll by Molmil
CRYSTAL STRUCTURE OF RAT NEURONAL NITRIC-OXIDE SYNTHASE REDUCTASE MODULE AT 2.3 A RESOLUTION.
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Garcin, E.D, Bruns, C.M, Lloyd, S.J, Hosfield, D.J, Tiso, M, Gachhui, R, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2004-06-09
Release date:2004-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for isozyme-specific regulation of electron transfer in nitric-oxide synthase
J.Biol.Chem., 279, 2004
7B03
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BU of 7b03 by Molmil
Cryo-EM structure of the green-light absorbing proteorhodopsin
Descriptor: Proteorhodopsin, RETINAL
Authors:Hirschi, S, Kalbermatter, D, Fotiadis, D.
Deposit date:2020-11-18
Release date:2021-06-16
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Cryo-EM structure and dynamics of the green-light absorbing proteorhodopsin
Nature Communications, 12, 2021
2HY5
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BU of 2hy5 by Molmil
Crystal structure of DsrEFH
Descriptor: DsrH, Intracellular sulfur oxidation protein dsrF, Putative sulfurtransferase dsrE
Authors:Shin, D.H, Schulte, A, Dahl, C, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2006-08-04
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of DsrEFH
To be Published
8TJH
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BU of 8tjh by Molmil
TGP-E, extreme thermostable green fluorescent protein (TGP) with Q66E mutation
Descriptor: 4-[(4Z)-1-(CARBOXYMETHYL)-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-2-YL]-4-IMINOBUTANOIC ACID, extreme thermostable green fluorescent protein (TGP-E)
Authors:Anderson, M.R, DeVore, N.D.
Deposit date:2023-07-21
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:TGP-E, extreme thermostable green fluorescent protein (TGP) with Q66E mutation
To Be Published
6W47
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BU of 6w47 by Molmil
Peptoid-Containing Collagen Peptide
Descriptor: 1,2-ETHANEDIOL, Collagen-like peptide
Authors:Chenoweth, D.M, Melton, S.D.
Deposit date:2020-03-10
Release date:2020-08-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Rules for the design of aza-glycine stabilized triple-helical collagen peptides.
Chem Sci, 11, 2020
8ILR
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BU of 8ilr by Molmil
Cryo-EM structure of PI3Kalpha in complex with compound 16
Descriptor: N-[(2S)-1-(ethylamino)-1-oxidanylidene-3-[4-(2-quinoxalin-6-ylethynyl)phenyl]propan-2-yl]-2,3-dimethyl-quinoxaline-6-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Zhou, Q, Liu, X, Neri, D, Li, W, Favalli, N, Bassi, G, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
Deposit date:2023-03-04
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural insights into the interaction of three Y-shaped ligands with PI3K alpha.
Proc.Natl.Acad.Sci.USA, 120, 2023
5JZK
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BU of 5jzk by Molmil
The Structure of Ultra Stable Green Fluorescent Protein
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Yong, K.J, Gunn, N.J, Scott, D.J, Griffin, M.D.W.
Deposit date:2016-05-17
Release date:2017-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Novel Ultra-Stable, Monomeric Green Fluorescent Protein For Direct Volumetric Imaging of Whole Organs Using CLARITY.
Sci Rep, 8, 2018
7SOB
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BU of 7sob by Molmil
SARS-CoV-2 S B.1.617.1 kappa variant + S309 + S2L20 Global Refinement
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, S2L20 Fab heavy chain, S2L20 Fab light chain, ...
Authors:McCallum, M, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-10-29
Release date:2021-11-17
Last modified:2022-01-05
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Molecular basis of immune evasion by the Delta and Kappa SARS-CoV-2 variants.
Science, 374, 2021
4V0G
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BU of 4v0g by Molmil
JAK3 in complex with a covalent EGFR inhibitor
Descriptor: N-[3-(2-{3-amino-6-[1-(1-methylpiperidin-4-yl)-1H-pyrazol-4-yl]pyrazin-2-yl}-1H-benzimidazol-1-yl)phenyl]propanamide, TYROSINE-PROTEIN KINASE JAK3
Authors:Debreczeni, J.E, Hennessy, E.J, Chuaquini, C, Ashton, S, Coclough, N, Cross, D.A.E, Eberlein, C, Gingipalli, L, Klinowska, T.C.M, Orme, J.P, Sha, L, Wu, X.
Deposit date:2014-09-16
Release date:2016-01-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Utilisation of Structure Based Design to Identify Novel, Irreversible Inhibitors of the Epidermal Growth Factor Receptor (Egfr) Harboring the Gatekeeper T790M Mutation
To be Published
2I9U
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BU of 2i9u by Molmil
Crystal Structure of Guanine Deaminase from C. acetobutylicum with bound guanine in the active site
Descriptor: Cytosine/guanine deaminase related protein, FE (III) ION, GLYCEROL, ...
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-09-06
Release date:2006-09-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of Guanine Deaminase from C. acetobutylicum with bound guanine in the active site
To be Published
5K54
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BU of 5k54 by Molmil
Human muscle fructose-1,6-bisphosphatase E69Q mutant in active R-state
Descriptor: Fructose-1,6-bisphosphatase isozyme 2
Authors:Barciszewski, J, Wisniewski, J, Kolodziejczyk, R, Dzugaj, A, Jaskolski, M, Rakus, D.
Deposit date:2016-05-23
Release date:2017-06-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.717 Å)
Cite:Structural studies of human muscle FBPase
To Be Published
7ZPJ
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BU of 7zpj by Molmil
Mammalian Dicer in the "pre-dicing state" with pre-miR-15a substrate and TARBP2 subunit
Descriptor: 59-nt precursor of miR-15a, Endoribonuclease Dicer, RISC-loading complex subunit TARBP2 isoform 1
Authors:Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
Deposit date:2022-04-27
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.81 Å)
Cite:Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
8VM8
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BU of 8vm8 by Molmil
The crystal structure of coxsackievirus B3 RNA replication element sD-loop mutant in complex with Fab BL3-6
Descriptor: Heavy Chain of Fab BL3-6, Light Chain of Fab BL3-6, RNA (93-MER)
Authors:Das, N.K, Koirala, D.
Deposit date:2024-01-13
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:The crystal structure of coxsackievirus B3 RNA replication element sD-loop mutant in complex with Fab BL3-6
To Be Published
8VMA
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BU of 8vma by Molmil
The crystal structure of rhinovirus C15 RNA replication element sD-loop mutant in complex with Fab BL3-6
Descriptor: Heavy Chain of Fab BL3-6, Light Chain of Fab BL3-6, RNA (88-MER)
Authors:Das, N.K, Koirala, D.
Deposit date:2024-01-13
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:The crystal structure of rhinovirus C15 RNA replication element sD-loop mutant in complex with Fab BL3-6
To Be Published
8VM9
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BU of 8vm9 by Molmil
The crystal structure of rhinovirus B14 RNA replication element sD-loop mutant in complex with Fab BL3-6
Descriptor: Heavy Chain of Fab BL3-6, Light Chain of Fab BL3-6, RNA (85-MER)
Authors:Das, N.K, Koirala, D.
Deposit date:2024-01-13
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of rhinovirus B14 RNA replication element sD-loop mutant in complex with Fab BL3-6
To Be Published

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数据于2024-07-24公开中

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