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PDB: 257 件
4WL1
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Structure of WzzE Polysaccharide Co-polymerase
分子名称: Lipopolysaccharide biosynthesis protein WzzE
著者Kalynych, S, Cherney, M, Cygler, M.
登録日2014-10-05
公開日2014-10-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (5.989 Å)
主引用文献Quaternary structure of WzzB and WzzE polysaccharide copolymerases.
Protein Sci., 24, 2015
8EP4
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BU of 8ep4 by Molmil
Structure of Bacple_01703
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, CALCIUM ION, ...
著者Ulaganathan, T, Cygler, M.
登録日2022-10-05
公開日2022-11-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献The porphyran degradation system of the human gut microbiota is complete, phylogenetically diverse and geographically structured across Asian populations
Biorxiv, 2023
8EW1
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BU of 8ew1 by Molmil
Structure of Bacple_01703-E145L
分子名称: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Ulaganathan, T, Cygler, M.
登録日2022-10-21
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The porphyran degradation system of the human gut microbiota is complete, phylogenetically diverse and geographically structured across Asian populations
Biorxiv, 2023
7UPS
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BU of 7ups by Molmil
Structural study of Legionella pneumophila effector DotY (Lpg0294)
分子名称: 1,2-ETHANEDIOL, DotY (Lpg0294)
著者Chung, I.Y.W, Cygler, M.
登録日2022-04-16
公開日2022-08-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural study of Legionella pneumophila effector DotY (Lpg0294), a component of the Dot/Icm type IV secretion system.
Acta Crystallogr.,Sect.F, 78, 2022
8SWI
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BU of 8swi by Molmil
Crystal structure of legAS4 from Legionella pneumophila subsp. pneumophila with histone H3 (1-12)peptide
分子名称: Eukaryotic huntingtin interacting protein B, Histone H3 peptided, S-ADENOSYL-L-HOMOCYSTEINE
著者Xu, C, Chung, I.Y.W, Cygler, M.
登録日2023-05-18
公開日2023-12-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The SET and ankyrin domains of the secreted Legionella pneumophila histone methyltransferase work together to modify host chromatin.
Mbio, 14, 2023
7PCK
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BU of 7pck by Molmil
CRYSTAL STRUCTURE OF WILD TYPE HUMAN PROCATHEPSIN K
分子名称: PROTEIN (PROCATHEPSIN K)
著者Sivaraman, J, Lalumiere, M, Menard, R, Cygler, M.
登録日1998-10-21
公開日1999-10-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of wild-type human procathepsin K.
Protein Sci., 8, 1999
8SR6
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BU of 8sr6 by Molmil
Crystal structure of legAS4 from Legionella pneumophila subsp. pneumophila with histone H3 (3-17)peptide
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Eukaryotic huntingtin interacting protein B, ...
著者Xu, C, Chung, I.Y.W, Cygler, M.
登録日2023-05-05
公開日2024-03-13
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Histone methyltransferase activity of the secreted Legionella pneumophila SET-domain effector RomA/LegAS4 depends on its ankyrin domain
To Be Published
7LSV
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BU of 7lsv by Molmil
Non-kinase domain of Legionella effector protein kinase LegK2
分子名称: Calmodulin-dependent protein kinase, MALONATE ION, SODIUM ION
著者Beyrakhova, K.A, van Straaten, K, Cygler, M.
登録日2021-02-18
公開日2022-01-26
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Non-kinase domain of Legionella effector protein kinase LegK2
To Be Published
1DBG
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BU of 1dbg by Molmil
CRYSTAL STRUCTURE OF CHONDROITINASE B
分子名称: 4-deoxy-alpha-D-glucopyranose-(1-3)-[beta-D-glucopyranose-(1-4)]2-O-methyl-beta-L-fucopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose, CHONDROITINASE B
著者Huang, W, Matte, A, Li, Y, Kim, Y.S, Linhardt, R.J, Su, H, Cygler, M.
登録日1999-11-02
公開日2000-01-12
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of chondroitinase B from Flavobacterium heparinum and its complex with a disaccharide product at 1.7 A resolution.
J.Mol.Biol., 294, 1999
1EOJ
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BU of 1eoj by Molmil
Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures
分子名称: ALPHA THROMBIN, THROMBIN INHIBITOR P798
著者Slon-Usakiewicz, J.J, Sivaraman, J, Li, Y, Cygler, M, Konishi, Y.
登録日2000-03-23
公開日2000-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures.
Biochemistry, 39, 2000
1EOL
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BU of 1eol by Molmil
Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures
分子名称: ALPHA THROMBIN, THROMBIN INHIBITOR P628
著者Slon-Usakiewicz, J.J, Sivaraman, J, Li, Y, Cygler, M, Konishi, Y.
登録日2000-03-23
公開日2000-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures.
Biochemistry, 39, 2000
7SNO
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BU of 7sno by Molmil
Structure of Bacple_01701(H214N), a 6-O-galactose porphyran sulfatase
分子名称: 1,2-ETHANEDIOL, 6-O-sulfo-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-6-O-sulfo-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose, Arylsulfatase, ...
著者Ulaganathan, T, Cygler, M.
登録日2021-10-28
公開日2022-10-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The porphyran degradation system of the human gut microbiota is complete, phylogenetically diverse and geographically structured across Asian populations
Biorxiv, 2023
7SNK
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Structure of Bacple_01702, a GH29 family glycoside hydrolase
分子名称: Alpha-L-fucosidase, PHOSPHATE ION, POTASSIUM ION
著者Ulaganathan, T, Cygler, M.
登録日2021-10-28
公開日2022-10-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The porphyran degradation system of the human gut microbiota is complete, phylogenetically diverse and geographically structured across Asian populations
Biorxiv, 2023
7SNJ
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BU of 7snj by Molmil
Structure of Bacple_01701, a 6-O-galactose porphyran sulfatase
分子名称: 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Arylsulfatase, ...
著者Ulaganathan, T, Cygler, M.
登録日2021-10-28
公開日2022-10-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献The porphyran degradation system of the human gut microbiota is complete, phylogenetically diverse and geographically structured across Asian populations
Biorxiv, 2023
6P0X
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BU of 6p0x by Molmil
Structure of the N-terminal domain of effector protein SpvB from Salmonella typhimurium strain LT2
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACRYLIC ACID, GLYCEROL, ...
著者Xu, C, Boniecki, M, Cygler, M.
登録日2019-05-17
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the N-terminal domain of effector protein SpvB from Salmonella typhimurium strain LT2
To Be Published
7TZK
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BU of 7tzk by Molmil
EPS8 SH3 Domain with NleH1 PxxDY Motif
分子名称: Epidermal growth factor receptor kinase substrate 8, T3SS secreted effector NleH homolog
著者Grishin, A.M, Cygler, M.
登録日2022-02-15
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Targeting of microvillus protein Eps8 by the NleH effector kinases from enteropathogenic E. coli
Proc.Natl.Acad.Sci.USA, 119, 2022
6UXE
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BU of 6uxe by Molmil
Structure of the human mitochondrial desulfurase complex Nfs1-ISCU2(M140I)-ISD11 with E.coli ACP1 at 1.57 A resolution showing flexibility of N terminal end of ISCU2
分子名称: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, ...
著者Boniecki, M.T, Cygler, M.
登録日2019-11-07
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献The essential function of ISCU2 and its conserved N-terminus in Fe/S cluster biogenesis
To Be Published
6W1D
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BU of 6w1d by Molmil
Structure of human mitochondrial complex Nfs1-ISCU2 (WT)-ISD11 with E.coli ACP1 at 1.8 A resolution (NIAU)2
分子名称: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, ...
著者Boniecki, M.T, Cygler, M.
登録日2020-03-04
公開日2020-03-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.795 Å)
主引用文献The essential function of ISCU2 and its conserved N-terminus in Fe/S cluster biogenesis
To Be Published
6BYX
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Complex structure of LOR107 mutant (R259N) with tetrasaccharide substrate
分子名称: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-3-O-sulfo-alpha-L-rhamnopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-3-O-sulfo-alpha-L-rhamnopyranose, CALCIUM ION, GLYCEROL, ...
著者Ulaganathan, T, Cygler, M.
登録日2017-12-21
公開日2018-02-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.208 Å)
主引用文献Structure-function analyses of a PL24 family ulvan lyase reveal key features and suggest its catalytic mechanism.
J. Biol. Chem., 293, 2018
6BYT
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BU of 6byt by Molmil
Complex structure of LOR107 mutant (R320) with tetrasaccharide substrate
分子名称: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-3-O-sulfo-alpha-L-rhamnopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-3-O-sulfo-alpha-L-rhamnopyranose, CALCIUM ION, GLYCEROL, ...
著者Ulaganathan, T.S, Cygler, M.
登録日2017-12-21
公開日2018-02-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-function analyses of a PL24 family ulvan lyase reveal key features and suggest its catalytic mechanism.
J. Biol. Chem., 293, 2018
6BYP
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BU of 6byp by Molmil
Structure of PL24 family Polysaccharide lyase-LOR107
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Ulaganathan, T.S, Cygler, M.
登録日2017-12-21
公開日2018-02-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-function analyses of a PL24 family ulvan lyase reveal key features and suggest its catalytic mechanism.
J. Biol. Chem., 293, 2018
4FZW
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BU of 4fzw by Molmil
Crystal Structure of the PaaF-PaaG Hydratase-Isomerase Complex from E.coli
分子名称: 1,2-epoxyphenylacetyl-CoA isomerase, 2,3-dehydroadipyl-CoA hydratase, GLYCEROL
著者Grishin, A.M, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2012-07-08
公開日2012-09-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Protein-Protein Interactions in the beta-Oxidation Part of the Phenylacetate Utilization Pathway. Crystal Structure of the PaaF-PaaG Hydratase-Isomerase Complex
J.Biol.Chem., 287, 2012
5CPC
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BU of 5cpc by Molmil
Crystal structure of SopD, a type III secreted virulence effector from Salmonella enterica
分子名称: Secreted effector protein SopD
著者Shi, R, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2015-07-21
公開日2015-09-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Salmonella Disrupts Host Endocytic Trafficking by SopD2-Mediated Inhibition of Rab7.
Cell Rep, 12, 2015
5CQ9
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BU of 5cq9 by Molmil
Crystal structure of SopD2, a type III secreted virulence effector from Salmonella enterica
分子名称: 11-mer peptide, Secreted effector protein sopD2
著者Shi, R, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2015-07-21
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Salmonella Disrupts Host Endocytic Trafficking by SopD2-Mediated Inhibition of Rab7.
Cell Rep, 12, 2015
5JMF
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BU of 5jmf by Molmil
Heparinase III-BT4657 gene product
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Heparinase III protein, ...
著者Ulaganathan, T.S, Shi, R, Yao, D, Garron, M.-L, Cherney, M, Cygler, M.
登録日2016-04-28
公開日2016-05-25
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (1.854 Å)
主引用文献Conformational flexibility of PL12 family heparinases: structure and substrate specificity of heparinase III from Bacteroides thetaiotaomicron (BT4657).
Glycobiology, 27, 2017

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