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PDB: 154 results

2AHO
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BU of 2aho by Molmil
Structure of the archaeal initiation factor eIF2 alpha-gamma heterodimer from Sulfolobus solfataricus complexed with GDPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Translation initiation factor 2 alpha subunit, ...
Authors:Yatime, L, Mechulam, Y, Blanquet, S, Schmitt, E.
Deposit date:2005-07-28
Release date:2006-01-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Switch of the gamma Subunit in an Archaeal aIF2alphagamma Heterodimer
Structure, 14, 2006
3FRH
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BU of 3frh by Molmil
Structure of the 16S rRNA methylase RmtB, P21
Descriptor: 16S rRNA methylase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schmitt, E, Galimand, M, Panvert, M, Dupechez, M, Courvalin, P, Mechulam, Y.
Deposit date:2009-01-08
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural bases for 16 S rRNA methylation catalyzed by ArmA and RmtB methyltransferases
J.Mol.Biol., 388, 2009
6Y3G
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BU of 6y3g by Molmil
Crystal structure of phenylalanine tRNA from Escherichia coli
Descriptor: CALCIUM ION, GLYCEROL, GUANIDINE, ...
Authors:Bourgeois, G, Mechulam, Y, Schmitt, E.
Deposit date:2020-02-18
Release date:2020-12-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis of the interaction between cyclodipeptide synthases and aminoacylated tRNA substrates.
Rna, 26, 2020
1ZQ1
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BU of 1zq1 by Molmil
Structure of GatDE tRNA-Dependent Amidotransferase from Pyrococcus abyssi
Descriptor: ASPARTIC ACID, Glutamyl-tRNA(Gln) amidotransferase subunit D, Glutamyl-tRNA(Gln) amidotransferase subunit E
Authors:Schmitt, E, Panvert, M, Blanquet, S, Mechulam, Y.
Deposit date:2005-05-18
Release date:2005-10-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for tRNA-Dependent Amidotransferase Function
Structure, 13, 2005
6Y4B
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BU of 6y4b by Molmil
Structure of cyclodipeptide synthase from Candidatus Glomeribacter gigasporarum bound to Phe-tRNAPhe
Descriptor: Cyclodipeptide synthase, PHENYLALANINE, RNA (77-MER)
Authors:Bourgeois, G, Mechulam, Y, Schmitt, E.
Deposit date:2020-02-20
Release date:2020-12-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (5 Å)
Cite:Structural basis of the interaction between cyclodipeptide synthases and aminoacylated tRNA substrates.
Rna, 26, 2020
3FZG
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BU of 3fzg by Molmil
Structure of the 16S rRNA methylase ArmA
Descriptor: 16S rRNA methylase, S-ADENOSYLMETHIONINE
Authors:Schmitt, E, Galimand, M, Panvert, M, Courvalin, P, Mechulam, Y.
Deposit date:2009-01-26
Release date:2009-08-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural bases for 16 S rRNA methylation catalyzed by ArmA and RmtB methyltransferases
J.Mol.Biol., 388, 2009
3FRI
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BU of 3fri by Molmil
Structure of the 16S rRNA methylase RmtB, I222
Descriptor: 16S rRNA methylase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schmitt, E, Galimand, M, Panvert, M, Dupechez, M, Courvalin, P, Mechulam, Y.
Deposit date:2009-01-08
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural bases for 16 S rRNA methylation catalyzed by ArmA and RmtB methyltransferases
J.Mol.Biol., 388, 2009
3H9B
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BU of 3h9b by Molmil
Structure of a mutant methionyl-tRNA synthetase with modified specificity complexed with azidonorleucine
Descriptor: 6-azido-L-norleucine, CITRIC ACID, Methionyl-tRNA synthetase, ...
Authors:Schmitt, E, Tanrikulu, I.C, Yoo, T.H, Panvert, M, Tirrell, D.A, Mechulam, Y.
Deposit date:2009-04-30
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity.
J.Mol.Biol., 394, 2009
1YZ6
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BU of 1yz6 by Molmil
Crystal structure of intact alpha subunit of aIF2 from Pyrococcus abyssi
Descriptor: Probable translation initiation factor 2 alpha subunit
Authors:Yatime, L, Schmitt, E, Blanquet, S, Mechulam, Y.
Deposit date:2005-02-28
Release date:2005-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:Structure-Function Relationships of the Intact aIF2alpha Subunit from the Archaeon Pyrococcus abyssi
Biochemistry, 44, 2005
3H99
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BU of 3h99 by Molmil
Structure of a mutant methionyl-tRNA synthetase with modified specificity complexed with methionine
Descriptor: CITRIC ACID, METHIONINE, Methionyl-tRNA synthetase, ...
Authors:Schmitt, E, Tanrikulu, I.C, Yoo, T.H, Panvert, M, Tirrell, D.A, Mechulam, Y.
Deposit date:2009-04-30
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity.
J.Mol.Biol., 394, 2009
3H97
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BU of 3h97 by Molmil
Structure of a mutant methionyl-tRNA synthetase with modified specificity
Descriptor: CITRIC ACID, Methionyl-tRNA synthetase, ZINC ION
Authors:Schmitt, E, Tanrikulu, I.C, Yoo, T.H, Panvert, M, Tirrell, D.A, Mechulam, Y.
Deposit date:2009-04-30
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity.
J.Mol.Biol., 394, 2009
3H9C
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BU of 3h9c by Molmil
Structure of methionyl-tRNA synthetase: crystal form 2
Descriptor: CITRIC ACID, Methionyl-tRNA synthetase, ZINC ION
Authors:Schmitt, E, Tanrikulu, I.C, Yoo, T.H, Panvert, M, Tirrell, D.A, Mechulam, Y.
Deposit date:2009-04-30
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity.
J.Mol.Biol., 394, 2009
1JKE
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BU of 1jke by Molmil
D-Tyr tRNATyr deacylase from Escherichia coli
Descriptor: D-Tyr-tRNATyr deacylase, ZINC ION
Authors:Ferri-Fioni, M.L, Schmitt, E, Soutourina, J, Plateau, P, Mechulam, Y, Blanquet, S.
Deposit date:2001-07-12
Release date:2002-01-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of crystalline D-Tyr-tRNA(Tyr) deacylase. A representative of a new class of tRNA-dependent hydrolases.
J.Biol.Chem., 276, 2001
2QMU
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BU of 2qmu by Molmil
Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states
Descriptor: GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, Translation initiation factor 2 alpha subunit, ...
Authors:Yatime, L, Mechulam, Y, Blanquet, S, Schmitt, E.
Deposit date:2007-07-17
Release date:2007-11-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states.
Proc.Natl.Acad.Sci.Usa, 104, 2007
7YZN
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BU of 7yzn by Molmil
Structure of C-terminally truncated aIF5B from Pyrococcus abyssi complexed with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Probable translation initiation factor IF-2, ...
Authors:Bourgeois, G, Schmitt, E, Mechulam, Y, Coureux, P.D, Kazan, R.
Deposit date:2022-02-21
Release date:2022-06-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
1P7P
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BU of 1p7p by Molmil
Methionyl-tRNA synthetase from Escherichia coli complexed with methionine phosphonate
Descriptor: (1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHONIC ACID, Methionyl-tRNA synthetase, ZINC ION
Authors:Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
Deposit date:2003-05-05
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
3GAB
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BU of 3gab by Molmil
C-terminal domain of Bacillus subtilis MutL crystal form I
Descriptor: DNA mismatch repair protein mutL
Authors:Guarne, A, Pillon, M.C, Lorenowicz, J.J, Mitchell, R.R, Chung, Y.S, Friedhoff, P.
Deposit date:2009-02-17
Release date:2010-07-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the endonuclease domain of MutL: unlicensed to cut.
Mol.Cell, 39, 2010
1MKH
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BU of 1mkh by Molmil
C-terminal domain of methionyl-tRNA synthetase from Pyrococcus abyssi
Descriptor: C-terminal domain of Methionyl-tRNA synthetase
Authors:Crepin, T, Schmitt, E, Blanquet, S, Mechulam, Y.
Deposit date:2002-08-29
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure and function of the C-terminal domain of methionyl-tRNA synthetase
Biochemistry, 41, 2002
1PFY
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BU of 1pfy by Molmil
METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONYL SULPHAMOYL ADENOSINE
Descriptor: 5'-O-[(L-METHIONYL)-SULPHAMOYL]ADENOSINE, Methionyl-tRNA synthetase, ZINC ION
Authors:Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
Deposit date:2003-05-27
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PFU
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BU of 1pfu by Molmil
METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONINE PHOSPHINATE
Descriptor: (1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHINIC ACID, Methionyl-tRNA synthetase, ZINC ION
Authors:Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
Deposit date:2003-05-27
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PG0
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BU of 1pg0 by Molmil
Methionyl-trna synthetase from escherichia coli complexed with methioninyl adenylate
Descriptor: L-METHIONYL ADENYLATE, Methionyl-tRNA synthetase
Authors:Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
Deposit date:2003-05-27
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PFW
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BU of 1pfw by Molmil
METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH TRIFLUOROMETHIONINE
Descriptor: 2-AMINO-4-TRIFLUOROMETHYLSULFANYL-BUTYRIC ACID, Methionyl-tRNA synthetase, ZINC ION
Authors:Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
Deposit date:2003-05-27
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1RQG
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BU of 1rqg by Molmil
Methionyl-tRNA synthetase from Pyrococcus abyssi
Descriptor: Methionyl-tRNA synthetase, ZINC ION
Authors:Crepin, T, Schmitt, E, Blanquet, S, Mechulam, Y.
Deposit date:2003-12-05
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Three-dimensional structure of methionyl-tRNA synthetase from Pyrococcus abyssi.
Biochemistry, 43, 2004
1PFV
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BU of 1pfv by Molmil
METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH DIFLUOROMETHIONINE
Descriptor: Methionyl-tRNA synthetase, S-(DIFLUOROMETHYL)HOMOCYSTEINE, ZINC ION
Authors:Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
Deposit date:2003-05-27
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PG2
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BU of 1pg2 by Molmil
METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONINE AND ADENOSINE
Descriptor: ADENOSINE, METHIONINE, Methionyl-tRNA synthetase
Authors:Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
Deposit date:2003-05-27
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003

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PDB entries from 2024-11-06

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