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PDB: 1028 results

5XO9
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BU of 5xo9 by Molmil
Thanatin in presence of LPS
Descriptor: Thanatin
Authors:Sinha, S, Bhattacharjya, S.
Deposit date:2017-05-27
Release date:2018-06-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Thanatin in presence of LPS
To Be Published
5XOL
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BU of 5xol by Molmil
Thanatin R13R14AA in complex with LPS
Descriptor: Thanatin
Authors:Sinha, S, Bhattacharjya, S.
Deposit date:2017-05-29
Release date:2018-07-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Thanatin R13R14AA in complex with LPS
To Be Published
7SN7
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BU of 7sn7 by Molmil
Cryo-EM structure of the enteropathogenic E. coli O127:H6 flagellar filament
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Chatterjee, S, Frankel, G, Egelman, E.H.
Deposit date:2021-10-27
Release date:2022-03-16
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022
6LUF
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BU of 6luf by Molmil
Trans-acting mutant Y290A of the central AAA+ domain of the flagellar regulatory protein FlrC
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Flagellar regulatory protein C
Authors:Dasgupta, J, Chakraborty, S.
Deposit date:2020-01-27
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Oligomerization of flagellar regulatory protein FlrC is essential for cis-mediated ATP binding while c-di-GMP prefers its monomeric state
To Be Published
6LUA
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BU of 6lua by Molmil
Cis-mutant R349A of the central AAA+ domain of the flagellar regulatory protein FlrC
Descriptor: 1,2-ETHANEDIOL, Flagellar regulatory protein C
Authors:Dasgupta, J, Chakraborty, S.
Deposit date:2020-01-27
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Oligomerization of flagellar regulatory protein FlrC is essential for cis-mediated ATP binding while c-di-GMP prefers its monomeric state
To Be Published
3CYM
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BU of 3cym by Molmil
Crystal structure of protein BAD_0989 from Bifidobacterium adolescentis
Descriptor: GLYCEROL, SODIUM ION, Uncharacterized protein BAD_0989
Authors:Patskovsky, Y, Ozyurt, S, Freeman, J, Chang, S, Bain, K, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-04-25
Release date:2008-05-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of protein BAD_0989 from Bifidobacterium adolescentis.
To be Published
5DBK
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BU of 5dbk by Molmil
apo form of the quorum sensor NprR from B. thuringiensis
Descriptor: Transcriptional regulator/TPR domain protein
Authors:Talagas, A, Perchat, S, Lereclus, D, Nessler, S.
Deposit date:2015-08-21
Release date:2016-07-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.241 Å)
Cite:How Quorum Sensing Connects Sporulation to Necrotrophism in Bacillus thuringiensis.
Plos Pathog., 12, 2016
3CLW
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BU of 3clw by Molmil
Crystal structure of conserved exported protein from Bacteroides fragilis
Descriptor: Conserved exported protein
Authors:Bonanno, J.B, Rutter, M, Bain, K.T, Chang, S, Ozyurt, K, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-03-20
Release date:2008-04-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Crystal structure of conserved exported protein from Bacteroides fragilis.
To be Published
6NRE
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BU of 6nre by Molmil
Monomeric Lipocalin Can F 6
Descriptor: Lipocalin-Can f 6 allergen
Authors:Clayton G, M, Kappler J, W, Chan, S.
Deposit date:2019-01-23
Release date:2019-09-25
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural characteristics of lipocalin allergens: Crystal structure of the immunogenic dog allergen Can f 6.
Plos One, 14, 2019
3D19
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BU of 3d19 by Molmil
Crystal structure of a conserved metalloprotein from Bacillus cereus
Descriptor: Conserved metalloprotein, FE (III) ION, MAGNESIUM ION
Authors:Bonanno, J.B, Patskovsky, Y, Freeman, J, Bain, K.T, Chang, S, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-05-05
Release date:2008-07-08
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a conserved metalloprotein from Bacillus cereus.
To be Published
5XO3
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BU of 5xo3 by Molmil
Thanatin M21F Free
Descriptor: Thanatin
Authors:Sinha, S, Bhattacharjya, S.
Deposit date:2017-05-26
Release date:2018-06-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Thanatin M21F Free
To Be Published
7TVI
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BU of 7tvi by Molmil
Alpha1/BetaB Heteromeric Glycine Receptor in Glycine-Bound State
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCINE, Glycine receptor beta subunit 2, ...
Authors:Gibbs, E, Chakrapani, S, Kumar, A.
Deposit date:2022-02-04
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Conformational transitions and allosteric modulation in a heteromeric glycine receptor
Nat Commun, 14, 2023
7TU9
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BU of 7tu9 by Molmil
Alpha1/BetaB Heteromeric Glycine Receptor in Strychnine-Bound State
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycine receptor beta subunit 2, ...
Authors:Gibbs, E, Kumar, A, Chakrapani, S.
Deposit date:2022-02-02
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Conformational transitions and allosteric modulation in a heteromeric glycine receptor
Nat Commun, 14, 2023
3ED4
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BU of 3ed4 by Molmil
Crystal structure of putative arylsulfatase from escherichia coli
Descriptor: ARYLSULFATASE, GLYCEROL, SODIUM ION, ...
Authors:Patskovsky, Y, Ozyurt, S, Gilmore, M, Chang, S, Bain, K, Wasserman, S, Koss, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-02
Release date:2008-09-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Arylsulfatase from Escherichia Coli
To be Published
7SQJ
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BU of 7sqj by Molmil
Cryo-EM structure of the seam subunits of the enteropathogenic E. coli O127:H6 flagellar filament
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Chatterjee, S, Frankel, G, Egelman, E.H.
Deposit date:2021-11-05
Release date:2022-03-16
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022
5WYR
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BU of 5wyr by Molmil
Crystal structure and catalytic mechanism of the essential m1G37 tRNA methyltransferase TrmD from Pseudomonas aeruginosa
Descriptor: SINEFUNGIN, tRNA (guanine-N(1)-)-methyltransferase
Authors:Jaroensuk, J, Liew, C.W, Atichartpongkul, S, Chionh, Y.H, Wong, Y.H, Zhong, W.H, McBee, M.E, Thongdee, N, Prestwich, E.G, DeMott, M.S, Mongkolsuk, S, Dedon, P.C, Lescar, J, Fuangthong, M.
Deposit date:2017-01-15
Release date:2017-12-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure and catalytic mechanism of the essential m1G37 tRNA methyltransferase TrmD fromPseudomonas aeruginosa.
Rna, 2019
6GQJ
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BU of 6gqj by Molmil
Crystal structure of human c-KIT kinase domain in complex with AZD3229-analogue (compound 18)
Descriptor: 2-[4-(6,7-dimethoxyquinazolin-4-yl)oxy-2-methoxy-phenyl]-~{N}-(1-propan-2-ylpyrazol-4-yl)ethanamide, Mast/stem cell growth factor receptor Kit
Authors:Schimpl, M, Hardy, C.J, Ogg, D.J, Overman, R.C, Packer, M.J, Kettle, J.G, Anjum, R, Barry, E, Bhavsar, D, Brown, C, Campbell, A, Goldberg, K, Grondine, M, Guichard, S, Hunt, T, Jones, O, Li, X, Moleva, O, Pearson, S, Shao, W, Smith, A, Smith, J, Stead, D, Stokes, S, Tucker, M, Ye, Y.
Deposit date:2018-06-07
Release date:2018-09-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Discovery of N-(4-{[5-Fluoro-7-(2-methoxyethoxy)quinazolin-4-yl]amino}phenyl)-2-[4-(propan-2-yl)-1 H-1,2,3-triazol-1-yl]acetamide (AZD3229), a Potent Pan-KIT Mutant Inhibitor for the Treatment of Gastrointestinal Stromal Tumors.
J. Med. Chem., 61, 2018
3N3D
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BU of 3n3d by Molmil
Crystal structure of geranylgeranyl pyrophosphate synthase from lactobacillus brevis atcc 367
Descriptor: Geranylgeranyl pyrophosphate synthase, SULFATE ION
Authors:Patskovsky, Y, Toro, R, Rutter, M, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-19
Release date:2010-06-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Geranylgeranyl Pyrophosphate Synthase from Lactobacillus Brevis
To be Published
3G12
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BU of 3g12 by Molmil
Crystal structure of a putative lactoylglutathione lyase from Bdellovibrio bacteriovorus
Descriptor: Putative lactoylglutathione lyase, SULFATE ION
Authors:Patskovsky, Y, Madegowda, M, Gilmore, M, Chang, S, Maletic, M, Smith, D, Sauder, J.M, Burley, S.K, Swaminathan, S, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-01-29
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of a putative lactoylglutathione lyase from Bdellovibrio bacteriovorus
To be Published
5XOA
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BU of 5xoa by Molmil
Thanatin M21F in complex with LPS
Descriptor: Thanatin
Authors:Sinha, S, Bhattacharyya, S.
Deposit date:2017-05-27
Release date:2018-06-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Thanatin M21F in complex with LPS
To Be Published
5XO4
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BU of 5xo4 by Molmil
Free Thanatin at 298K
Descriptor: Thanatin
Authors:Sinha, S, Bhattacharjya, S.
Deposit date:2017-05-26
Release date:2018-06-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Free Thanatin at 298K
To Be Published
5N2M
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BU of 5n2m by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with a tetrahydroquinoline analogue
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, propan-2-yl ~{N}-[(2~{S},4~{R})-6-(3-acetamidophenyl)-1-ethanoyl-2-methyl-3,4-dihydro-2~{H}-quinolin-4-yl]carbamate
Authors:Tallant, C, Slavish, P.J, Siejka, P, Bharatham, N, Shadrick, W.R, Chai, S, Young, B.M, Boyd, V.A, Heroven, C, Wiggers, H.J, Picaud, S, Fedorov, O, Krojer, T, Chen, T, Lee, R.E, Guy, R.K, Shelat, A.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2017-02-07
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structure of the first bromodomain of human BRD4 in complex with a tetrahydroquinoline analogue
To Be Published
6GQO
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BU of 6gqo by Molmil
Crystal structure of human KDR (VEGFR2) kinase domain in complex with AZD3229-analogue (compound 18)
Descriptor: 2-[4-(6,7-dimethoxyquinazolin-4-yl)oxy-2-methoxy-phenyl]-~{N}-(1-propan-2-ylpyrazol-4-yl)ethanamide, Vascular endothelial growth factor receptor 2
Authors:Ogg, D.J, Schimpl, M, Hardy, C.J, Overman, R.C, Packer, M.J, Kettle, J.G, Anjum, R, Barry, E, Bhavsar, D, Brown, C, Campbell, A, Goldberg, K, Grondine, M, Guichard, S, Hunt, T, Jones, O, Li, X, Moleva, O, Pearson, S, Shao, W, Smith, A, Smith, J, Stead, D, Stokes, S, Tucker, M, Ye, Y.
Deposit date:2018-06-07
Release date:2018-09-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Discovery of N-(4-{[5-Fluoro-7-(2-methoxyethoxy)quinazolin-4-yl]amino}phenyl)-2-[4-(propan-2-yl)-1 H-1,2,3-triazol-1-yl]acetamide (AZD3229), a Potent Pan-KIT Mutant Inhibitor for the Treatment of Gastrointestinal Stromal Tumors.
J. Med. Chem., 61, 2018
3FYF
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BU of 3fyf by Molmil
Crystal structure of uncharacterized protein bvu_3222 from bacteroides vulgatus
Descriptor: PROTEIN BVU-3222
Authors:Patskovsky, Y, Bonanno, J.B, Ozyurt, S, Rutter, M, Chang, S, Groshong, C, Koss, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-01-22
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Protein Bvu-3222 from Bacteroides Vulgatus
To be Published
6GQK
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BU of 6gqk by Molmil
Crystal structure of human c-KIT kinase domain in complex with AZD3229-analogue (compound 23)
Descriptor: Mast/stem cell growth factor receptor Kit, ~{N}-[4-(6,7-dimethoxyquinazolin-4-yl)oxyphenyl]-2-(1-ethylpyrazol-4-yl)ethanamide
Authors:Schimpl, M, Hardy, C.J, Ogg, D.J, Overman, R.C, Packer, M.J, Kettle, J.G, Anjum, R, Barry, E, Bhavsar, D, Brown, C, Campbell, A, Goldberg, K, Grondine, M, Guichard, S, Hunt, T, Jones, O, Li, X, Moleva, O, Pearson, S, Shao, W, Smith, A, Smith, J, Stead, D, Stokes, S, Tucker, M, Ye, Y.
Deposit date:2018-06-07
Release date:2018-09-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Discovery of N-(4-{[5-Fluoro-7-(2-methoxyethoxy)quinazolin-4-yl]amino}phenyl)-2-[4-(propan-2-yl)-1 H-1,2,3-triazol-1-yl]acetamide (AZD3229), a Potent Pan-KIT Mutant Inhibitor for the Treatment of Gastrointestinal Stromal Tumors.
J. Med. Chem., 61, 2018

224004

PDB entries from 2024-08-21

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