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PDB: 64 results

4B9T
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BU of 4b9t by Molmil
Structure of the high fidelity DNA polymerase I with an oxidative formamidopyrimidine-dG DNA lesion -dC basepair in the post-insertion site.
Descriptor: 5'-D(*AP*CP*CP*TP*GP*AP*CP*TP*CP*TP)-3', 5'-D(*CP*AP*TP*FOXP*AP*GP*AP*GP*TP*CP*AP*GP*GP*TP*TP)-3', DNA POLYMERASE, ...
Authors:Gehrke, T.H, Lischke, U, Arnold, S, Schneider, S, Carell, T.
Deposit date:2012-09-06
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Unexpected Non-Hoogsteen-Based Mutagenicity Mechanism of Fapy-DNA Lesions.
Nat.Chem.Biol., 9, 2013
4B9M
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BU of 4b9m by Molmil
Structure of the high fidelity DNA polymerase I with an oxidative formamidopyrimidine-dA DNA lesion -thymine basepair in the post- insertion site.
Descriptor: 5'-D(*DC*DA*DA*FAX*AP*GP*AP*GP*TP*CP*AP*GP*GP*CP*TP)-3', 5'-D(*GP*CP*CP*TP*GP*AP*CP*TP*CP*TP*TP)-3', DNA POLYMERASE I, ...
Authors:Gehrke, T.H, Lischke, U, Arnold, S, Schneider, S, Carell, T.
Deposit date:2012-09-05
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Unexpected Non-Hoogsteen-Based Mutagenicity Mechanism of Fapy-DNA Lesions.
Nat.Chem.Biol., 9, 2013
2WQ7
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BU of 2wq7 by Molmil
Structure of the 6-4 photolyase of D. melanogaster in complex with the non-natural N4-methyl T(6-4)C lesion
Descriptor: 5'-D(*AP*CP*AP*GP*CP*GP*GP*TDYP*ZP*GP* CP*AP*AP*GP*T)-3', 5'-D(*TP*AP*CP*CP*TP*GP*CP*GP*AP*CP* CP*GP*CP*TP*G)-3', FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Glas, A.F, Kaya, E, Schneider, S, Maul, M.J, Carell, T.
Deposit date:2009-08-14
Release date:2010-02-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:DNA (6-4) Photolyases Reduce Dewar Isomers for Isomerization Into (6-4) Lesions.
J.Am.Chem.Soc., 132, 2010
2XY7
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BU of 2xy7 by Molmil
Crystal structure of a salicylic aldehyde base in the pre-insertion site of fragment DNA polymerase I from Bacillus stearothermophilus
Descriptor: 5'-D(*GP*CP*CP*TP*GP*AP*CP*TP*CP*GP)-3', 5'-D(*SAYP*CP*GP*AP*GP*TP*CP*AP*GP*GP*CP)-3', DNA POLYMERASE I, ...
Authors:Kaul, C, Mueller, M, Wagner, M, Schneider, S, Carell, T.
Deposit date:2010-11-15
Release date:2011-07-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Reversible Bond Formation Enables the Replication and Amplification of a Crosslinking Salen Complex as an Orthogonal Base Pair.
Nature Chem., 3, 2011
2Y1I
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Crystal structure of a S-diastereomer analogue of the spore photoproduct in complex with fragment DNA polymerase I from Bacillus stearothermophilus
Descriptor: 5'-D(*AP*GP*GP*GP*PBTP*THM*GP*GP*TP*CP)-3', 5'-D(*GP*AP*CP*CP*AP*AP*CP*CP*CP*TP)-3', DNA POLYMERASE I, ...
Authors:Heil, K, Schneider, S, Mueller, M, Kneuttinger, A.C, Carell, T.
Deposit date:2010-12-08
Release date:2011-07-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Crystal Structures and Repair Studies Reveal the Identity and the Base-Pairing Properties of the Uv-Induced Spore Photoproduct DNA Lesion.
Chemistry, 17, 2011
2XY5
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Crystal structure of an artificial salen-copper basepair in complex with fragment DNA polymerase I from Bacillus stearothermophilus
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 5'-D(*AP*GP*GP*GP*AP*SAYP*GP*GP*TP*CP)-3', 5'-D(*GP*AP*CP*CP*SAYP*TP*CP*CP*CP*TP)-3', ...
Authors:Kaul, C, Mueller, M, Wagner, M, Schneider, S, Carell, T.
Deposit date:2010-11-15
Release date:2011-07-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Reversible Bond Formation Enables the Replication and Amplification of a Crosslinking Salen Complex as an Orthogonal Base Pair.
Nature Chem., 3, 2011
2XY6
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Crystal structure of a salicylic aldehyde basepair in complex with fragment DNA polymerase I from Bacillus stearothermophilus
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(*AP*GP*GP*GP*AP*SAYP*GP*GP*TP*CP)-3', ...
Authors:Kaul, C, Mueller, M, Wagner, M, Schneider, S, Carell, T.
Deposit date:2010-11-15
Release date:2011-07-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Reversible Bond Formation Enables the Replication and Amplification of a Crosslinking Salen Complex as an Orthogonal Base Pair.
Nature Chem., 3, 2011
2Y1J
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CRYSTAL STRUCTURE OF A R-DIASTEREOMER ANALOGUE OF THE SPORE PHOTOPRODUCT IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS
Descriptor: 5'-D(*AP*GP*GP*GP*QBTP*THM*GP*GP*TP*CP)-3', 5'-D(*GP*AP*CP*CP*AP*AP*CP*CP*CP*TP)-3', DNA POLYMERASE I, ...
Authors:Heil, K, Schneider, S, Mueller, M, Kneuttinger, A.C, Carell, T.
Deposit date:2010-12-08
Release date:2011-07-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structures and Repair Studies Reveal the Identity and the Base-Pairing Properties of the Uv-Induced Spore Photoproduct DNA Lesion.
Chemistry, 17, 2011
2XGP
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BU of 2xgp by Molmil
Yeast DNA polymerase eta in complex with C8-2-acetylaminofluorene containing DNA
Descriptor: 5'-D(*CP*8FG*CP*TP*CP*AP*TP*CP*CP*AP*C)-3', 5'-D(*GP*TP*GP*GP*AP*TP*GP*AP*G)-3', CALCIUM ION, ...
Authors:Scheider, S, Lammens, K, Schorr, S, Hopfner, K.P, Carell, T.
Deposit date:2010-06-07
Release date:2010-11-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanism of Replication Blocking and Bypass of Y-Family Polymerase Eta by Bulky Acetylaminofluorene DNA Adducts.
Proc.Natl.Acad.Sci.USA, 107, 2010
2XGQ
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BU of 2xgq by Molmil
Structure of yeast DNA polymerase eta in complex with C8-N-acetyl-2- aminoanthracene containing DNA
Descriptor: 5'-D(*CP*8AG*CP*TP*CP*AP*TP*CP*CP*AP*C)-3', 5'-D(*GP*TP*GP*GP*AP*TP*GP*AP*G)-3', CALCIUM ION, ...
Authors:Schneider, S, Schorr, S, Carell, T.
Deposit date:2010-06-07
Release date:2010-11-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanism of Replication Blocking and Bypass of Y-Family Polymerase Eta by Bulky Acetylaminofluorene DNA Adducts.
Proc.Natl.Acad.Sci.USA, 107, 2010
2XO7
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BU of 2xo7 by Molmil
Crystal structure of a dA:O-allylhydroxylamine-dC basepair in complex with fragment DNA polymerase I from Bacillus stearothermophilus
Descriptor: 5'-D(*AP*GP*GP*AP*AP*TP*GP*GP*TP*CP*A)-3', 5'-D(*GP*AP*CP*CP*AP*TP*47C*CP*CP*T)-3', DNA POLYMERASE I, ...
Authors:Muenzel, M, Lercher, L, Mueller, M, Carell, T.
Deposit date:2010-08-10
Release date:2010-09-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Chemical Discrimination between Dc and 5Medc Via Their Hydroxylamine Adducts
Nucleic Acids Res., 38, 2010
2WQ6
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BU of 2wq6 by Molmil
Structure of the 6-4 photolyase of D. melanogaster in complex with the non-natural N4-methyl T(Dewar)C lesion
Descriptor: 5'-D(*AP*CP*AP*GP*CP*GP*GP*TDYP*CDWP*GP* CP*AP*AP*GP*T)-3', 5'-D(*TP*AP*CP*CP*TP*GP*CP*GP*AP*CP* CP*GP*CP*TP*G)-3', FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Glas, A.F, Kaya, E, Schneider, S, Maul, M.J, Carell, T.
Deposit date:2009-08-14
Release date:2010-02-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DNA (6-4) Photolyases Reduce Dewar Isomers for Isomerization Into (6-4) Lesions
J.Am.Chem.Soc., 132, 2010
2XRY
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BU of 2xry by Molmil
X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei
Descriptor: DEOXYRIBODIPYRIMIDINE PHOTOLYASE, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Kiontke, S, Geisselbrecht, Y, Pokorny, R, Carell, T, Batschauer, A, Essen, L.O.
Deposit date:2010-09-24
Release date:2011-09-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structures of an Archaeal Class II DNA Photolyase and its Complex with Uv-Damaged Duplex DNA.
Embo J., 30, 2011
2XRZ
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X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei in complex with intact CPD-lesion
Descriptor: ACETATE ION, COUNTERSTRAND-OLIGONUCLEOTIDE, CPD-COMPRISING OLIGONUCLEOTIDE, ...
Authors:Kiontke, S, Geisselbrecht, Y, Pokorny, R, Carell, T, Batschauer, A, Essen, L.O.
Deposit date:2010-09-24
Release date:2011-09-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of an Archaeal Class II DNA Photolyase and its Complex with Uv-Damaged Duplex DNA.
Embo J., 30, 2011
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