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PDB: 77 件

3QF8
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X-ray crystal structure of the ruthenium complex [Ru(tap)2(dppz)]2+ bound to d(TCGGCGCCGA) at medium resolution
分子名称: 5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3', BARIUM ION, Ru(tap)2(dppz) complex
著者Cardin, C.J, Hall, J.P.
登録日2011-01-21
公開日2011-10-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structure determination of an intercalating ruthenium dipyridophenazine complex which kinks DNA by semiintercalation of a tetraazaphenanthrene ligand.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QRN
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X-ray crystal structure of the ruthenium complex [Ru(tap)2(dppz)]2+ bound to d(TCGGCGCCGA)at high resolution
分子名称: 5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3', BARIUM ION, Ru(tap)2(dppz) complex
著者Cardin, C.J, Hall, J.P.
登録日2011-02-18
公開日2011-10-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structure determination of an intercalating ruthenium dipyridophenazine complex which kinks DNA by semiintercalation of a tetraazaphenanthrene ligand.
Proc.Natl.Acad.Sci.USA, 108, 2011
1EG6
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CRYSTAL STRUCTURE ANALYSIS OF D(CG(5-BRU)ACG) COMPLEXES TO A PHENAZINE
分子名称: 5'-D(*CP*GP*(BRO)UP*AP*CP*G)-3', 9-BROMO-PHENAZINE-1-CARBOXYLIC ACID (2-DIMETHYLAMINO-ETHYL)-AMIDE, BROMIDE ION, ...
著者Cardin, C.J, Denny, W.A, Hobbs, J.R, Thorpe, J.H.
登録日2000-02-14
公開日2001-01-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Guanine specific binding at a DNA junction formed by d[CG(5-BrU)ACG](2) with a topoisomerase poison in the presence of Co(2+) ions.
Biochemistry, 39, 2000
3T86
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d(GCATGCT) + calcium
分子名称: CALCIUM ION, DNA (5'-D(*GP*CP*AP*TP*GP*CP*T)-3'), POTASSIUM ION
著者Cardin, C.J, Gan, Y.
登録日2011-08-01
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A novel structure for the d(GCATGCT) quadruplex in the presence of nickel and cobalt aqueous cations : comparison with the vanadium, barium and calcium-bound structural motif.
To be Published
3U38
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BU of 3u38 by Molmil
Intercalation of lambda-[Ru(phen)2(dppz)]2+ into d(CCGGTACCGG)2
分子名称: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', BARIUM ION, Lambda-Ru(phen)2(dppz) complex
著者Cardin, C.J, Hall, J.P, Niyazi, H.
登録日2011-10-05
公開日2012-07-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structures of lambda-[Ru(phen)2dppz]2+ with oligonucleotides containing TA/TA and AT/AT steps show two intercalation modes
Nat Chem, 4, 2012
1NT8
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Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 2.00 A
分子名称: 5'-d(CpCpGpGpTpApCpCpGpG)-3', CALCIUM ION
著者Cardin, C.J, Gale, B.C, Thorpe, J.H, Texieira, S.C.M, Gan, Y, Moraes, M.I.A.A, Brogden, A.L.
登録日2003-01-29
公開日2003-02-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Analysis of two Holliday Junctions formed by the sequences TCGGTACCGA and CCGGTACCGG
To be Published
1NVN
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Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 1.8 A
分子名称: 5'-D(CpCpGpGpTpApCpCpGpG)-3', CALCIUM ION
著者Cardin, C.J, Gale, B.C, Thorpe, J.H, Teixeira, S.C.M, Gan, Y, Moraes, M.I.A.A, Brogden, A.L.
登録日2003-02-04
公開日2003-02-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural analysis of two Holliday junctions formed by the sequences TCGGTACCGA and CCGGTACCGG
To be Published
1QYK
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GCATGCT + Barium
分子名称: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', BARIUM ION
著者Cardin, C.J, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A.
登録日2003-09-11
公開日2003-10-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Metal Ion Distribution and Stabilization of the DNA Quadruplex Structure Formed by d(GCATGCT)
To be published
1NQS
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Structural Characterisation of the Holliday Junction formed by the sequence d(TCGGTACCGA) at 1.97 A
分子名称: 5'-d(TpCpGpGpTpApCpCpGpA)-3', CALCIUM ION
著者Cardin, C.J, Gale, B.C, Thorpe, J.H, Texieira, S.C.M, Gan, Y, Moraes, M.I.A.A, Brogden, A.L.
登録日2003-01-22
公開日2003-02-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural Analysis of two Holliday junctions formed by the sequences TCGGTACCGA and CCGGTACCGG
To be Published
1NVY
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Strontium bound to the Holliday junction sequence d(TCGGTACCGA)4
分子名称: STRONTIUM ION, d(TCGGTACCGA)4
著者Cardin, C.J, Thorpe, J.H, Gale, B.C, Teixeira, S.C.M.
登録日2003-02-05
公開日2003-02-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Strontium, a MAD taerget for the DNA Holliday junction
To be published
1QZL
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BU of 1qzl by Molmil
GCATGCT + Cobalt
分子名称: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', COBALT (II) ION
著者Cardin, C.J, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A.
登録日2003-09-17
公開日2003-10-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Metal Ion Distribution and Stabilisation of the DNA Quadruplex Structure Formed by d(GCATGCT)
To be published
1QYL
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BU of 1qyl by Molmil
GCATGCT + Vanadium
分子名称: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', VANADIUM ION
著者Cardin, C.J, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A.
登録日2003-09-11
公開日2003-10-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Metal Ion Distribution and Stabilisation of the DNA Quadruplex Structure Formed by d(GCATGCT)
To be Published
3GOO
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BU of 3goo by Molmil
Strontium bound to the Holliday junction sequence d(TCGGCGCCGA)4
分子名称: 5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3', STRONTIUM ION
著者Naseer, A, Cardin, C.J.
登録日2009-03-19
公開日2009-04-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Strontium bound to the Holliday junction sequence d(TCGGCGCCGA)4
To be Published
2GB9
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BU of 2gb9 by Molmil
d(CGTACG)2 crosslinked bis-acridine complex
分子名称: 5'-D(*CP*GP*TP*AP*CP*G)-3', 9,9'-(HEXANE-1,6-DIYLDIIMINO)BIS{N-[2-(DIMETHYLAMINO)ETHYL]ACRIDINE-4-CARBOXAMIDE}, STRONTIUM ION
著者Hopcroft, N.H, Brogden, A.L, Searcey, M, Cardin, C.J.
登録日2006-03-10
公開日2006-04-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献X-ray crystallographic study of DNA duplex cross-linking: simultaneous binding to two d(CGTACG)2 molecules by a bis(9-aminoacridine-4-carboxamide) derivative.
Nucleic Acids Res., 34, 2006
7OTB
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BU of 7otb by Molmil
Ruthenium polypridyl complex bound to a unimolecular chair-form G-quadruplex
分子名称: BARIUM ION, DNA (5'-D(*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*TP*GP*GP*G)-3'), POTASSIUM ION, ...
著者McQuaid, K.T, Cardin, C.J, Hall, J.P, Paterson, N.G, Baumgaertner, L.
登録日2021-06-09
公開日2022-04-06
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Ruthenium Polypyridyl Complex Bound to a Unimolecular Chair-Form G-Quadruplex.
J.Am.Chem.Soc., 144, 2022
5ET2
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BU of 5et2 by Molmil
Lambda-Ru(TAP)2(dppz)]2+ bound to d(TTGGCGCCAA)
分子名称: BARIUM ION, DNA (5'-D(*(THM)P*TP*GP*GP*CP*GP*CP*CP*AP*A)-3'), Ru(tap)2(dppz) complex
著者Hall, J.P, Cardin, C.J.
登録日2015-11-17
公開日2016-11-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Inosine Can Increase DNA's Susceptibility to Photo-oxidation by a Ru(II) Complex due to Structural Change in the Minor Groove.
Chemistry, 23, 2017
6GLD
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BU of 6gld by Molmil
Intercalation of [Ru(TAP)2(11-Br-dppz)]2+ bound to d(TCGGCGCCGA)2
分子名称: BARIUM ION, Ruthenium (bis-(tetraazaphenanthrene)) (11-bromo-dipyridophenazine), d(TCGGCGCCGA)2
著者McQuaid, K.T, Hall, J.P, Cardin, C.J.
登録日2018-05-23
公開日2019-06-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.061 Å)
主引用文献X-ray Crystal Structures Show DNA Stacking Advantage of Terminal Nitrile Substitution in Ru-dppz Complexes.
Chemistry, 24, 2018
8CMM
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BU of 8cmm by Molmil
Re-pairing DNA - binding of a ruthenium phi complex to a double mismatch
分子名称: DNA (5'-D(*CP*GP*CP*TP*AP*TP*AP*AP*TP*GP*CP*G)-3'), LITHIUM ION, POTASSIUM ION, ...
著者Prieto Otoya, T.D, Cardin, C.J, McQuaid, K.M.
登録日2023-02-20
公開日2024-03-06
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Re-pairing DNA: binding of a ruthenium phi complex to a double mismatch.
Chem Sci, 15, 2024
6HWG
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[Ru(phen)2(dppz-11-CN)]2+ bound to d(TCGGCGCCGA)2
分子名称: BARIUM ION, DNA (5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3'), Ruthenium (bis-(phenanthroline)) (11-cyano-dipyridophenazine)
著者McQuaid, K.T, Hall, J.P, Cardin, C.J.
登録日2018-10-11
公開日2019-10-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献[Ru(phen)2(dppz-11-CN)]2+ bound to d(TCGGCGCCGA)2
To Be Published
6G8S
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[Ru(TAP)2(11,12-CN2-dppz)]2+ bound to d(CCGGACCCGG/CCGGGTCCGG)2
分子名称: BARIUM ION, DNA (5'-D(*CP*CP*GP*GP*AP*CP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*GP*TP*CP*CP*GP*G)-3'), ...
著者McQuaid, K.T, Hall, J.P, Cardin, C.J.
登録日2018-04-09
公開日2019-04-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献X-ray Crystal Structures Show DNA Stacking Advantage of Terminal Nitrile Substitution in Ru-dppz Complexes.
Chemistry, 24, 2018
4X18
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[Ru(TAP)2(dppz-11-Me)]2+ bound to d(TCGGCGCCGA)
分子名称: (11-methyldipyrido[3,2-a:2',3'-c]phenazine-kappa~2~N~4~,N~5~)[bis(pyrazino[2,3-f]quinoxaline-kappa~2~N~1~,N~10~)]ruthenium, BARIUM ION, CHLORIDE ION, ...
著者Hall, J.P, Cardin, C.J.
登録日2014-11-24
公開日2015-05-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献The Structural Effect of Methyl Substitution on the Binding of Polypyridyl Ru-dppz Complexes to DNA
Organometallics, 2015
4X1A
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Lambda-[Ru(TAP)2(dppz-10,12-Me)]2+ bound to d(TCGGCGCCGA)
分子名称: (10,12-dimethyldipyrido[3,2-a:2',3'-c]phenazine-kappa~2~N~4~,N~5~)[bis(pyrazino[2,3-f]quinoxaline-kappa~2~N~1~,N~10~)]ruthenium, BARIUM ION, DNA (5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3')
著者Hall, J.P, Cardin, C.J.
登録日2014-11-24
公開日2015-05-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献The Structural Effect of Methyl Substitution on the Binding of Polypyridyl Ru-dppz Complexes to DNA
Organometallics, 2015
4III
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Lambda-[Ru(TAP)2(11-Cl-dppz)] with a DNA decamer at atomic resolution
分子名称: 5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3', BARIUM ION, Ru(TAP)2(Cl-dppz) complex
著者Hall, J.P, Cardin, C.J.
登録日2012-12-20
公開日2013-07-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Preferred orientation in an angled intercalation site of a chloro-substituted Lambda-[Ru(TAP)2(dppz)]2+ complex bound to d(TCGGCGCCGA)2.
Philos Trans A Math Phys Eng Sci, 371, 2013
3PBX
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Strontium bound to the sequence d(CCGGCGCCGG)
分子名称: DNA, SODIUM ION, STRONTIUM ION
著者Naseer, A, Cardin, C.J.
登録日2010-10-21
公開日2011-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.879 Å)
主引用文献Strontium bound to the sequence d(CCGGCGCCGG)
To be Published
6R6D
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[Ru(TAP)2(11,12-CN2-dppz)]2+ bound to d(TCGGCGCCGA)2
分子名称: BARIUM ION, DNA (5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3'), Ruthenium (bis-(tetraazaphenanthrene)) (11,12-dicyano-dipyridophenazine), ...
著者McQuaid, K.T, Hall, J.P, Cardin, C.J.
登録日2019-03-27
公開日2020-05-06
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.838 Å)
主引用文献X-ray Crystal Structures Show DNA Stacking Advantage of Terminal Nitrile Substitution in Ru-dppz Complexes.
Chemistry, 24, 2018

 

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