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PDB: 39 results

5SXP
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BU of 5sxp by Molmil
STRUCTURAL BASIS FOR THE INTERACTION BETWEEN ITCH PRR AND BETA-PIX
Descriptor: E3 ubiquitin-protein ligase Itchy homolog, Rho guanine nucleotide exchange factor 7
Authors:Cappadocia, L, Desrochers, G, Lussier-Price, M, Angers, A, Omichinski, J.G.
Deposit date:2016-08-09
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular basis of interactions between SH3 domain-containing proteins and the proline-rich region of the ubiquitin ligase Itch.
J. Biol. Chem., 292, 2017
4WJQ
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BU of 4wjq by Molmil
Crystal Structure of SUMO1 in complex with Daxx
Descriptor: Daxx, Small ubiquitin-related modifier 1
Authors:Cappadocia, L, Mascle, X.H, Bourdeau, V, Tremblay-Belzile, S, Chaker-Margot, M, Lussier-Price, M, Wada, J, Sakaguchi, K, Aubry, M, Ferbeyre, G, Omichinski, J.G.
Deposit date:2014-10-01
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and Functional Characterization of the Phosphorylation-Dependent Interaction between PML and SUMO1.
Structure, 23, 2015
4WJN
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BU of 4wjn by Molmil
Crystal structure of SUMO1 in complex with phosphorylated PML
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Cappadocia, L, Mascle, X.H, Bourdeau, V, Tremblay-Belzile, S, Chaker-Margot, M, Lussier-Price, M, Wada, J, Sakaguchi, K, Aubry, M, Ferbeyre, G, Omichinski, J.G.
Deposit date:2014-10-01
Release date:2014-12-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Functional Characterization of the Phosphorylation-Dependent Interaction between PML and SUMO1.
Structure, 23, 2015
4WJP
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BU of 4wjp by Molmil
Crystal Structure of SUMO1 in complex with phosphorylated Daxx
Descriptor: Daxx, Small ubiquitin-related modifier 1
Authors:Cappadocia, L, Mascle, X.H, Bourdeau, V, Tremblay-Belzile, S, Chaker-Margot, M, Lussier-Price, M, Wada, J, Sakaguchi, K, Aubry, M, Ferbeyre, G, Omichinski, J.G.
Deposit date:2014-10-01
Release date:2014-12-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Characterization of the Phosphorylation-Dependent Interaction between PML and SUMO1.
Structure, 23, 2015
4WJO
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BU of 4wjo by Molmil
Crystal Structure of SUMO1 in complex with PML
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Cappadocia, L, Mascle, X.H, Bourdeau, V, Tremblay-Belzile, S, Chaker-Margot, M, Lussier-Price, M, Wada, J, Sakaguchi, K, Aubry, M, Ferbeyre, G, Omichinski, J.G.
Deposit date:2014-10-01
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural and Functional Characterization of the Phosphorylation-Dependent Interaction between PML and SUMO1.
Structure, 23, 2015
4KOQ
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BU of 4koq by Molmil
Crystal Structure of WHY3 from Arabidopsis thaliana
Descriptor: PHOSPHATE ION, Single-stranded DNA-binding protein WHY3, chloroplastic
Authors:Cappadocia, L, Parent, J.S, Brisson, N, Sygusch, J.
Deposit date:2013-05-12
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A family portrait: structural comparison of the Whirly proteins from Arabidopsis thaliana and Solanum tuberosum.
Acta Crystallogr.,Sect.F, 69, 2013
4KOO
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BU of 4koo by Molmil
Crystal Structure of WHY1 from Arabidopsis thaliana
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, NICKEL (II) ION, PHOSPHATE ION, ...
Authors:Cappadocia, L, Parent, J.S, Brisson, N, Sygusch, J.
Deposit date:2013-05-12
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A family portrait: structural comparison of the Whirly proteins from Arabidopsis thaliana and Solanum tuberosum.
Acta Crystallogr.,Sect.F, 69, 2013
3RA0
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BU of 3ra0 by Molmil
Crystal Structure of a StWhy2 K67A-dT32 complex
Descriptor: DNA 32-mer dT32, Why2 protein
Authors:Cappadocia, L, Brisson, N, Sygusch, J.
Deposit date:2011-03-26
Release date:2011-09-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.451 Å)
Cite:A conserved lysine residue of plant Whirly proteins is necessary for higher order protein assembly and protection against DNA damage.
Nucleic Acids Res., 40, 2012
3R9Y
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BU of 3r9y by Molmil
Crystal Structure of StWhy2 K67A (form I)
Descriptor: PHOSPHATE ION, Why2 protein
Authors:Cappadocia, L, Brisson, N, Sygusch, J.
Deposit date:2011-03-26
Release date:2011-09-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A conserved lysine residue of plant Whirly proteins is necessary for higher order protein assembly and protection against DNA damage.
Nucleic Acids Res., 40, 2012
4KOP
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BU of 4kop by Molmil
Crystal Structure of WHY2 from Arabidopsis thaliana
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Single-stranded DNA-binding protein WHY2, mitochondrial
Authors:Cappadocia, L, Parent, J.S, Brisson, N, Sygusch, J.
Deposit date:2013-05-12
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A family portrait: structural comparison of the Whirly proteins from Arabidopsis thaliana and Solanum tuberosum.
Acta Crystallogr.,Sect.F, 69, 2013
3R9Z
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BU of 3r9z by Molmil
Crystal Structure of StWhy2 K67A (form II)
Descriptor: PHOSPHATE ION, Why2 protein
Authors:Cappadocia, L, Brisson, N, Sygusch, J.
Deposit date:2011-03-26
Release date:2011-09-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.755 Å)
Cite:A conserved lysine residue of plant Whirly proteins is necessary for higher order protein assembly and protection against DNA damage.
Nucleic Acids Res., 40, 2012
5D2M
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BU of 5d2m by Molmil
Complex between human SUMO2-RANGAP1, UBC9 and ZNF451
Descriptor: 1,2-ETHANEDIOL, Ran GTPase-activating protein 1, SUMO-conjugating enzyme UBC9, ...
Authors:Cappadocia, L, Lima, C.D.
Deposit date:2015-08-05
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for catalytic activation by the human ZNF451 SUMO E3 ligase.
Nat.Struct.Mol.Biol., 22, 2015
3N1J
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BU of 3n1j by Molmil
Crystal structure of a StWhy2-dT32 complex
Descriptor: DNA 32-mer dT32, Protein StWhy2
Authors:Cappadocia, L, Brisson, N, Sygusch, J.
Deposit date:2010-05-15
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structures of DNA-Whirly Complexes and Their Role in Arabidopsis Organelle Genome Repair.
Plant Cell, 22, 2010
3N1I
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BU of 3n1i by Molmil
Crystal Structure of a StWhy2-ERE32 complex
Descriptor: DNA 32-mer ERE32, protein StWhy2
Authors:Cappadocia, L, Brisson, N, Sygusch, J.
Deposit date:2010-05-15
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of DNA-Whirly Complexes and Their Role in Arabidopsis Organelle Genome Repair.
Plant Cell, 22, 2010
3N1L
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BU of 3n1l by Molmil
Crystal Structure of a StWhy2-rcERE32 complex
Descriptor: DNA 32-mer rcERE32, protein StWhy2
Authors:Cappadocia, L, Brisson, N, Sygusch, J.
Deposit date:2010-05-15
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structures of DNA-Whirly Complexes and Their Role in Arabidopsis Organelle Genome Repair.
Plant Cell, 22, 2010
3N1H
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BU of 3n1h by Molmil
Crystal Structure of StWhy2
Descriptor: PHOSPHATE ION, StWhy2
Authors:Cappadocia, L, Brisson, N, Sygusch, J.
Deposit date:2010-05-15
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Crystal Structures of DNA-Whirly Complexes and Their Role in Arabidopsis Organelle Genome Repair.
Plant Cell, 22, 2010
3N1K
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BU of 3n1k by Molmil
Crystal Structure of a StWhy2-cERE32 complex
Descriptor: DNA 32-mer cERE32, protein StWhy2
Authors:Cappadocia, L, Brisson, N, Sygusch, J.
Deposit date:2010-05-15
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Crystal Structures of DNA-Whirly Complexes and Their Role in Arabidopsis Organelle Genome Repair.
Plant Cell, 22, 2010
5C17
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BU of 5c17 by Molmil
Crystal structure of the mercury-bound form of MerB2
Descriptor: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, GLYCEROL, MERCURY (II) ION, ...
Authors:Wahba, H.M, Lecoq, L, Stevenson, M, Mansour, A, Cappadocia, L, Lafrance-Vanasse, J, Wilkinson, K.J, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2015-06-13
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Structural and Biochemical Characterization of a Copper-Binding Mutant of the Organomercurial Lyase MerB: Insight into the Key Role of the Active Site Aspartic Acid in Hg-Carbon Bond Cleavage and Metal Binding Specificity.
Biochemistry, 55, 2016
8DJH
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BU of 8djh by Molmil
Ternary complex of SUMO1 with a phosphomimetic SIM of PML and zinc
Descriptor: PML 4SD, Small ubiquitin-related modifier 1, ZINC ION
Authors:Lussier-Price, M, Wahba, H.M, Mascle, X.H, Cappadocia, L, Bourdeau, V, Gagnon, C, Igelmann, S, Sakaguchi, K, Ferbeyre, G, Omichinski, J.G.
Deposit date:2022-06-30
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Zinc controls PML nuclear body formation through regulation of a paralog specific auto-inhibition in SUMO1.
Nucleic Acids Res., 50, 2022
8DJI
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BU of 8dji by Molmil
Ternary complex of SUMO1 with the SIM of PML and zinc
Descriptor: Protein PML, Small ubiquitin-related modifier 1, ZINC ION
Authors:Lussier-Price, M, Wahba, H.M, Mascle, X.H, Cappadocia, L, Bourdeau, V, Gagnon, C, Igelmann, S, Sakaguchi, K, Ferbeyre, G, Omichinski, J.G.
Deposit date:2022-06-30
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Zinc controls PML nuclear body formation through regulation of a paralog specific auto-inhibition in SUMO1.
Nucleic Acids Res., 50, 2022
2M14
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BU of 2m14 by Molmil
NMR structure of the complex between the PH domain of the Tfb1 subunit from TFIIH and Rad4
Descriptor: DNA repair protein RAD4, RNA polymerase II transcription factor B subunit 1
Authors:Lafrance-Vanasse, J, Arseneault, G, Cappadocia, L, Legault, P, Omichinski, J.G.
Deposit date:2012-11-16
Release date:2013-01-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and functional evidence that Rad4 competes with Rad2 for binding to the Tfb1 subunit of TFIIH in NER.
Nucleic Acids Res., 41, 2013
5C0U
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BU of 5c0u by Molmil
Crystal structure of the copper-bound form of MerB mutant D99S
Descriptor: Alkylmercury lyase, BROMIDE ION, COPPER (II) ION
Authors:Wahba, H.M, Lecoq, L, Stevenson, M, Mansour, A, Cappadocia, L, Lafrance-Vanasse, J, Wilkinson, K.J, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2015-06-12
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural and Biochemical Characterization of a Copper-Binding Mutant of the Organomercurial Lyase MerB: Insight into the Key Role of the Active Site Aspartic Acid in Hg-Carbon Bond Cleavage and Metal Binding Specificity.
Biochemistry, 55, 2016
5C0T
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BU of 5c0t by Molmil
Crystal structure of the mercury-bound form of MerB mutant D99S
Descriptor: Alkylmercury lyase, BROMIDE ION, MERCURY (II) ION
Authors:Wahba, H.M, Lecoq, L, Stevenson, M, Mansour, A, Cappadocia, L, Lafrance-Vanasse, J, Wilkinson, K.J, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2015-06-12
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural and Biochemical Characterization of a Copper-Binding Mutant of the Organomercurial Lyase MerB: Insight into the Key Role of the Active Site Aspartic Acid in Hg-Carbon Bond Cleavage and Metal Binding Specificity.
Biochemistry, 55, 2016
5DSF
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BU of 5dsf by Molmil
Crystal structure of the mercury-bound form of MerB mutant D99S
Descriptor: Alkylmercury lyase, BROMIDE ION, MERCURY (II) ION
Authors:Wahba, H.M, Lecoq, L, Stevenson, M, Mansour, A, Cappadocia, L, Lafrance-Vanasse, J, Wilkinson, K.J, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2015-09-17
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Structural and Biochemical Characterization of a Copper-Binding Mutant of the Organomercurial Lyase MerB: Insight into the Key Role of the Active Site Aspartic Acid in Hg-Carbon Bond Cleavage and Metal Binding Specificity.
Biochemistry, 55, 2016
6U75
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BU of 6u75 by Molmil
Crystal Structure of S. Cerevisiae SUMO E3 Ligase SIZ2
Descriptor: E3 SUMO-protein ligase SIZ2, ZINC ION
Authors:Lima, C.D, Cappadocia, L.
Deposit date:2019-08-31
Release date:2020-10-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:DNA asymmetry promotes SUMO modification of the single-stranded DNA-binding protein RPA.
Embo J., 40, 2021

 

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数据于2024-11-06公开中

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