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PDB: 2226 results

6DS8
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BU of 6ds8 by Molmil
Crystal structure of MhuD R26S mutant with two Manganese protoporphyrin IX bound per active site
Descriptor: CHLORIDE ION, Heme-degrading monooxygenase HmoB, MANGANESE PROTOPORPHYRIN IX
Authors:Chao, A, Goulding, C.W.
Deposit date:2018-06-13
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of MhuD R26S mutant with two Manganese protoporphyrin IX bound per active site
To Be Published
6SPV
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BU of 6spv by Molmil
Crystal structure of PDZ1-2 from PSD-95
Descriptor: Disks large homolog 4, GLUTATHIONE
Authors:Rodzli, N, Levy, C.W, Prince, S.M.
Deposit date:2019-09-02
Release date:2019-10-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The Dual PDZ Domain from Postsynaptic Density Protein 95 Forms a Scaffold with Peptide Ligand.
Biophys.J., 119, 2020
6XL0
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BU of 6xl0 by Molmil
Caulobacter crescentus FljK filament
Descriptor: Flagellin
Authors:Montemayor, E.J, Ploscariu, N.T, Sanchez, J.C, Parrell, D, Dillard, R.S, Shebelut, C.W, Ke, Z, Guerrero-Ferreira, R.C, Wright, E.R.
Deposit date:2020-06-27
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Flagellar Structures from the Bacterium Caulobacter crescentus and Implications for Phage phi CbK Predation of Multiflagellin Bacteria
J.Bacteriol., 203, 2021
3D10
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BU of 3d10 by Molmil
Crystal Structure of S100B in the Calcium and Zinc Loaded State at pH 10.0
Descriptor: CALCIUM ION, Protein S100-B, TRIETHYLENE GLYCOL, ...
Authors:Ostendorp, T, Diez, J, Heizmann, C.W, Fritz, G.
Deposit date:2008-05-02
Release date:2009-04-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structures of human S100B in the zinc- and calcium-loaded state at three pH values reveal zinc ligand swapping.
Biochim.Biophys.Acta, 1813, 2011
7W5R
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BU of 7w5r by Molmil
KRAS G12V and peptide complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, LEU-TYR-ASP-VAL-ALA, ...
Authors:Kim, H.J, Han, C.W, Jang, S.B.
Deposit date:2021-11-30
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.87 Å)
Cite:Structural basis of the oncogenic KRAS mutant and GJ101 complex.
Biochem.Biophys.Res.Commun., 641, 2023
7W5Q
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BU of 7w5q by Molmil
The Kruppel-associated box (KRAB) domain of human zinc finger protein 568
Descriptor: Zinc finger protein 568
Authors:Han, C.W, Jang, S.B.
Deposit date:2021-11-30
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structure of the kruppel-associated box (KRAB) domain
To Be Published
6XKY
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BU of 6xky by Molmil
Caulobacter crescentus FljK filament, straightened
Descriptor: Flagellin
Authors:Montemayor, E.J, Ploscariu, N.T, Sanchez, J.C, Parrell, D, Dillard, R.S, Shebelut, C.W, Ke, Z, Guerrero-Ferreira, R.C, Wright, E.R.
Deposit date:2020-06-27
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Flagellar Structures from the Bacterium Caulobacter crescentus and Implications for Phage phi CbK Predation of Multiflagellin Bacteria
J.Bacteriol., 203, 2021
7UBZ
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BU of 7ubz by Molmil
Chymotrypsin digested toxin/immunity complex for a T6SS lipase effector from E. cloacae
Descriptor: Ankyrin repeat domain-containing protein, CITRATE ANION, GLYCEROL, ...
Authors:Cuthbert, B.J, Jensen, S.J, Goulding, C.W, Hayes, C.S.
Deposit date:2022-03-15
Release date:2022-08-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Toxin/immunity complex for a T6SS lipase effector from E. cloacae
To Be Published
6XD1
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BU of 6xd1 by Molmil
Dengue serotype 3 RNA-dependent RNA polymerase bound to NITD-640
Descriptor: (2R)-4-(butyl{[2'-(1H-tetrazol-5-yl)[1,1'-biphenyl]-4-yl]methyl}carbamoyl)-1-(2,2-diphenylpropanoyl)piperazine-2-carboxylic acid, RNA-dependent RNA polymerase, ZINC ION
Authors:Arora, R, Benson, T.E, Liew, C.W, Lescar, J.
Deposit date:2020-06-09
Release date:2020-09-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Two RNA Tunnel Inhibitors Bind in Highly Conserved Sites in Dengue Virus NS5 Polymerase: Structural and Functional Studies.
J.Virol., 94, 2020
7UQ0
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BU of 7uq0 by Molmil
Putative periplasmic iron siderophore binding protein FecB (Rv3044) from Mycobacterium tuberculosis
Descriptor: CITRIC ACID, GLYCEROL, PENTAETHYLENE GLYCOL, ...
Authors:Chao, A, Cuthbert, B.J, Goulding, C.W.
Deposit date:2022-04-18
Release date:2022-10-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Differentiating the roles of Mycobacterium tuberculosis substrate binding proteins, FecB and FecB2, in iron uptake.
Plos Pathog., 19, 2023
6DS7
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BU of 6ds7 by Molmil
Crystal structure of MhuD R26S mutant with two hemes bound per active site
Descriptor: CHLORIDE ION, Heme-degrading monooxygenase HmoB, PROTOPORPHYRIN IX CONTAINING FE
Authors:Chao, A, Goulding, C.W.
Deposit date:2018-06-13
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of MhuD R26S mutant with two hemes bound per active site
To Be Published
7X7G
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BU of 7x7g by Molmil
Crystal structure of a dimeric interlocked parallel G-quadruplex
Descriptor: DNA (5'-D(*GP*GP*GP*GP*TP*GP*GP*GP*AP*GP*GP*TP*GP*GP*GP*T)-3'), POTASSIUM ION
Authors:Ngo, K.H, Liew, C.W, Lattmann, S, Winnerdy, F.R, Phan, A.T.
Deposit date:2022-03-09
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Crystal structures of an HIV-1 integrase aptamer: Formation of a water-mediated A.G.G.G.G pentad in an interlocked G-quadruplex.
Biochem.Biophys.Res.Commun., 613, 2022
7XDH
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BU of 7xdh by Molmil
Crystal structure of a dimeric interlocked parallel G-quadruplex
Descriptor: DNA (5'-D(*GP*GP*GP*GP*TP*GP*GP*GP*AP*GP*GP*AP*GP*GP*GP*T)-3'), POTASSIUM ION
Authors:Ngo, K.H, Liew, C.W, Lattmann, S, Winnerdy, F.R, Phan, A.T.
Deposit date:2022-03-27
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structures of an HIV-1 integrase aptamer: Formation of a water-mediated A.G.G.G.G pentad in an interlocked G-quadruplex.
Biochem.Biophys.Res.Commun., 613, 2022
6DZH
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BU of 6dzh by Molmil
HRAS G13D bound to GDP (H13GDP)
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CALCIUM ION, GLYCEROL, ...
Authors:Johnson, C.W, Mattos, C.
Deposit date:2018-07-04
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Isoform-Specific Destabilization of the Active Site Reveals a Molecular Mechanism of Intrinsic Activation of KRas G13D.
Cell Rep, 28, 2019
6EQG
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BU of 6eqg by Molmil
Crystal structure of a polyethylene terephthalate degrading hydrolase from Ideonella sakaiensis in spacegroup P21
Descriptor: CHLORIDE ION, Poly(ethylene terephthalate) hydrolase, SULFATE ION
Authors:Austin, H.P, Allen, M.D, Johnson, C.W, Beckham, G.T, McGeehan, J.E.
Deposit date:2017-10-12
Release date:2018-04-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Characterization and engineering of a plastic-degrading aromatic polyesterase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3J45
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BU of 3j45 by Molmil
Structure of a non-translocating SecY protein channel with the 70S ribosome
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L23, 50S ribosomal protein L24, ...
Authors:Menetret, J.F, Park, E, Gumbart, J.C, Ludtke, S.J, Li, W, Whynot, A, Rapoport, T.A, Akey, C.W.
Deposit date:2013-06-18
Release date:2013-10-23
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Structure of the SecY channel during initiation of protein translocation.
Nature, 506, 2013
3J46
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BU of 3j46 by Molmil
Structure of the SecY protein translocation channel in action
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L1, 50S ribosomal protein L23P, ...
Authors:Akey, C.W, Park, E, Menetret, J.F, Gumbart, J.C, Ludtke, S.J, Li, W, Whynot, A, Rapoport, T.A.
Deposit date:2013-06-18
Release date:2013-10-23
Last modified:2019-07-03
Method:ELECTRON MICROSCOPY (10.1 Å)
Cite:Structure of the SecY channel during initiation of protein translocation.
Nature, 506, 2013
4HNY
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BU of 4hny by Molmil
Apo N-terminal acetyltransferase complex A
Descriptor: GLYCEROL, N-terminal acetyltransferase A complex catalytic subunit ARD1, N-terminal acetyltransferase A complex subunit NAT1, ...
Authors:Neubauer, J.L, Immormino, R.M, Dollins, D.E, Endo-Streeter, S.T, Pemble IV, C.W, York, J.D.
Deposit date:2012-10-21
Release date:2014-03-26
Method:X-RAY DIFFRACTION (2.249 Å)
Cite:The Protein Complex NatA Binds Inositol Hexakisphosphate and Exhibits Conformational Flexibility
To be Published
4EYY
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BU of 4eyy by Molmil
Crystal Structure of the IcmR-IcmQ complex from Legionella pneumophila
Descriptor: IcmQ, IcmR
Authors:Farelli, J.D, Gumbart, J, Akey, I.V, Amyot, W, Hempstead, A.D, Head, J.F, McKnight, C.J, Isberg, R.R, Akey, C.W.
Deposit date:2012-05-02
Release date:2013-05-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:IcmQ in the Type 4b secretion system contains an NAD+ binding domain.
Structure, 21, 2013
4H8Q
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BU of 4h8q by Molmil
Structure of the Q29T IsdX2-NEAT5 mutant in complex with heme
Descriptor: Iron Transport-associated domain protein, PROTOPORPHYRIN IX CONTAINING FE, ZINC ION
Authors:Owens, C.P, Goulding, C.W.
Deposit date:2012-09-23
Release date:2013-02-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Near-iron Transporter (NEAT) Domains of the Anthrax Hemophore IsdX2 Require a Critical Glutamine to Extract Heme from Methemoglobin.
J.Biol.Chem., 288, 2013
4H8P
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BU of 4h8p by Molmil
NEAT5 domain of IsdX2, a B. anthracis hemophore in complex with heme
Descriptor: Iron Transport-associated domain protein, PROTOPORPHYRIN IX CONTAINING FE, ZINC ION
Authors:Owens, C.P, Goulding, C.W.
Deposit date:2012-09-23
Release date:2013-02-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Near-iron Transporter (NEAT) Domains of the Anthrax Hemophore IsdX2 Require a Critical Glutamine to Extract Heme from Methemoglobin.
J.Biol.Chem., 288, 2013
4HCT
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BU of 4hct by Molmil
Crystal structure of ITK in complex with compound 52
Descriptor: 3-{1-[(3R)-1-acryloylpiperidin-3-yl]-4-amino-1H-pyrazolo[3,4-d]pyrimidin-3-yl}-N-(3-tert-butylphenyl)benzamide, Tyrosine-protein kinase ITK/TSK
Authors:Zapf, C.W, Gerstenberger, B.S, Xing, L, Limburg, D.C, Anderson, D.R, Caspers, N, Han, S, Aulabaugh, A, Kurumbail, R, Shakya, S, Li, X, Spaulding, V, Czerwinski, R.M, Seth, N, Medley, Q.G.
Deposit date:2012-10-01
Release date:2012-11-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Covalent inhibitors of interleukin-2 inducible T cell kinase (itk) with nanomolar potency in a whole-blood assay.
J.Med.Chem., 55, 2012
3FXE
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BU of 3fxe by Molmil
Crystal structure of interacting domains of IcmR and IcmQ (seleno-derivative)
Descriptor: Protein IcmQ, Protein IcmR
Authors:Raychaudhury, S, Akey, C.W, Head, J.F.
Deposit date:2009-01-20
Release date:2009-04-28
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Function of Interacting IcmR-IcmQ Domains from a Type IVb Secretion System in Legionella pneumophila.
Structure, 17, 2009
4HNW
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BU of 4hnw by Molmil
The NatA Acetyltransferase Complex Bound To Inositol Hexakisphosphate
Descriptor: INOSITOL HEXAKISPHOSPHATE, N-terminal acetyltransferase A complex catalytic subunit ARD1, N-terminal acetyltransferase A complex subunit NAT1, ...
Authors:Neubauer, J.L, Immormino, R.M, Dollins, D.E, Endo-Streeter, S.T, Pemble IV, C.W, York, J.D.
Deposit date:2012-10-21
Release date:2014-03-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:The Protein Complex NatA Binds Inositol Hexakisphosphate and Exhibits Conformational Flexibility
To be Published
3FXD
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BU of 3fxd by Molmil
Crystal structure of interacting domains of IcmR and IcmQ
Descriptor: Protein IcmQ, Protein IcmR
Authors:Raychaudhury, S, Akey, C.W, Head, J.F.
Deposit date:2009-01-20
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and Function of Interacting IcmR-IcmQ Domains from a Type IVb Secretion System in Legionella pneumophila.
Structure, 17, 2009

226707

数据于2024-10-30公开中

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