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PDB: 1279 results

5HPI
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BU of 5hpi by Molmil
Crystal Structure of the Double Mutant of PobR Transcription Factor Inducer Binding Domain-3-Hydroxy Benzoic Acid complex from Acinetobacter
Descriptor: 1,2-ETHANEDIOL, 3-HYDROXYBENZOIC ACID, SULFATE ION, ...
Authors:Kim, Y, Tesar, C, Jedrejczak, R, Jha, R, Strauss, C.E.M, Joachimiak, A.
Deposit date:2016-01-20
Release date:2016-09-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.963 Å)
Cite:A microbial sensor for organophosphate hydrolysis exploiting an engineered specificity switch in a transcription factor.
Nucleic Acids Res., 44, 2016
5IC0
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BU of 5ic0 by Molmil
Structural analysis of a talin triple domain module
Descriptor: 1,2-ETHANEDIOL, Talin-1
Authors:Wu, J, Chang, Y.-C.E, Zhang, H, Brennan, M.L.
Deposit date:2016-02-22
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural and Functional Analysis of a Talin Triple-Domain Module Suggests an Alternative Talin Autoinhibitory Configuration.
Structure, 24, 2016
5IC1
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BU of 5ic1 by Molmil
Structural analysis of a talin triple domain module, E1794Y, E1797Y, Q1801Y mutant
Descriptor: 1,2-ETHANEDIOL, Talin-1
Authors:Wu, J, Chang, Y.-C.E, Zhang, H, Huang, Q.-Q.
Deposit date:2016-02-22
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Functional Analysis of a Talin Triple-Domain Module Suggests an Alternative Talin Autoinhibitory Configuration.
Structure, 24, 2016
5HPF
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BU of 5hpf by Molmil
Crystal Structure of the Double Mutant of PobR Transcription Factor Inducer Binding Domain from Acinetobacter
Descriptor: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Kim, Y, Tesar, C, Jedrejczak, R, Jha, R, Strauss, C.E.M, Joachimiak, A.
Deposit date:2016-01-20
Release date:2016-09-07
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.309 Å)
Cite:A microbial sensor for organophosphate hydrolysis exploiting an engineered specificity switch in a transcription factor.
Nucleic Acids Res., 44, 2016
5JPR
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BU of 5jpr by Molmil
Neutron Structure of Compound II of Ascorbate Peroxidase
Descriptor: Ascorbate peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kwon, H, Blakeley, M.P, Raven, E.L, Moody, P.C.E.
Deposit date:2016-05-04
Release date:2016-12-21
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.806 Å), X-RAY DIFFRACTION
Cite:Direct visualization of a Fe(IV)-OH intermediate in a heme enzyme.
Nat Commun, 7, 2016
5H83
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HETEROYOHIMBINE SYNTHASE HYS FROM CATHARANTHUS ROSEUS - APO FORM
Descriptor: ZINC ION, heteroyohimbine synthase HYS
Authors:Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
Deposit date:2015-12-23
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
5JQR
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BU of 5jqr by Molmil
The Structure of Ascorbate Peroxidase Compound II formed by reaction with m-CPBA
Descriptor: Ascorbate peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kwon, H, Raven, E.L, Moody, P.C.E.
Deposit date:2016-05-05
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Direct visualization of a Fe(IV)-OH intermediate in a heme enzyme.
Nat Commun, 7, 2016
2Y6B
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BU of 2y6b by Molmil
Ascorbate Peroxidase R38K mutant
Descriptor: ASCORBATE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Metcalfe, C.L, Efimov, I, Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2011-01-20
Release date:2011-10-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Proton Delivery to Ferryl Heme in a Heme Peroxidase: Enzymatic Use of the Grotthuss Mechanism.
J.Am.Chem.Soc., 133, 2011
8PFD
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BU of 8pfd by Molmil
Crystal structure of binary complex between Aster yellows witches'-broom phytoplasma effector SAP05 and the von Willebrand Factor Type A domain of the proteasomal ubiquitin receptor Rpn10 from Arabidopsis thaliana
Descriptor: 26S proteasome non-ATPase regulatory subunit 4 homolog, Sequence-variable mosaic (SVM) signal sequence domain-containing protein
Authors:Huang, W, Liu, Q, Maqbool, A, Stevenson, C.E.M, Lawson, D.M, Kamoun, S, Hogenhout, S.A.
Deposit date:2023-06-15
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Bimodular architecture of bacterial effector SAP05 that drives ubiquitin-independent targeted protein degradation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PPZ
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BU of 8ppz by Molmil
Co-crystal structure of FKBP12, compound 7 and the FRB fragment of mTOR
Descriptor: (1~{S},5~{S},6~{R})-10-[3,5-bis(chloranyl)phenyl]sulfonyl-5-[(~{E})-2-(2-chlorophenyl)ethenyl]-3-(pyridin-2-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-2-one, ACETATE ION, CALCIUM ION, ...
Authors:Meyners, C, Deutscher, R.C.E, Hausch, F.
Deposit date:2023-07-10
Release date:2023-08-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Co-crystal structure of FKBP12, compound 7 and the FRB fragment of mTOR
Chemrxiv, 2023
2YCG
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BU of 2ycg by Molmil
Structure of unreduced ferric cytochrome c peroxidase obtained by multicrystal method
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTOCHROME C PEROXIDASE, MITOCHONDRIAL, ...
Authors:Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2011-03-14
Release date:2011-03-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Hydrogen Bonds in Ferric Cytochrome C Peroxidase: A Combined X-Ray and Neutron Study
To be Published
8PFC
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BU of 8pfc by Molmil
Crystal structure of binary complex between Aster yellows witches'-broom phytoplasma effector SAP05 and the zinc finger domain of SPL5 from Arabidopsis thaliana
Descriptor: Sequence-variable mosaic (SVM) signal sequence domain-containing protein, Squamosa promoter-binding-like protein 5, ZINC ION
Authors:Huang, W, Liu, Q, Maqbool, A, Stevenson, C.E.M, Lawson, D.M, Kamoun, S, Hogenhout, S.A.
Deposit date:2023-06-15
Release date:2023-07-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bimodular architecture of bacterial effector SAP05 that drives ubiquitin-independent targeted protein degradation.
Proc.Natl.Acad.Sci.USA, 120, 2023
2Y6A
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BU of 2y6a by Molmil
Ascorbate Peroxidase R38A mutant
Descriptor: ASCORBATE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Metcalfe, C.L, Efimov, I, Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2011-01-20
Release date:2011-10-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Proton Delivery to Ferryl Heme in a Heme Peroxidase: Enzymatic Use of the Grotthuss Mechanism.
J.Am.Chem.Soc., 133, 2011
2XJ8
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BU of 2xj8 by Molmil
The structure of ferrous cytochrome c peroxidase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTOCHROME C PEROXIDASE, MITOCHONDRIAL, ...
Authors:Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2010-07-02
Release date:2010-07-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Nature of the ferryl heme in compounds I and II.
J. Biol. Chem., 286, 2011
2XM5
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BU of 2xm5 by Molmil
Structural and Mechanistic Analysis of the Magnesium-Independent Aromatic Prenyltransferase CloQ from the Clorobiocin Biosynthetic Pathway
Descriptor: 1,2-ETHANEDIOL, CLOQ, FORMIC ACID
Authors:Metzger, U, Keller, S, Stevenson, C.E.M, Heide, L, Lawson, D.M.
Deposit date:2010-07-23
Release date:2010-10-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and Mechanism of the Magnesium-Independent Aromatic Prenyltransferase Cloq from the Clorobiocin Biosynthetic Pathway.
J.Mol.Biol., 404, 2010
4BQE
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BU of 4bqe by Molmil
Arabidopsis thaliana Cytosolic Alpha-1,4-glucan Phosphorylase (PHS2)
Descriptor: ALPHA-GLUCAN PHOSPHORYLASE 2,4-GLUCAN PHOSPHORYLASE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:O'Neill, E.C, Rashid, A.M, Stevenson, C.E.M, Hetru, A.C, Gunning, A.P, Rejzek, M, Nepogodiev, S.A, Bornemann, S, Lawson, D.M, Field, R.A.
Deposit date:2013-05-30
Release date:2014-02-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Sugar-Coated Sensor Chip and Nanoparticle Surfaces for the in Vitro Enzymatic Synthesis of Starch-Like Materials
Chem.Sci., 5, 2014
2XIL
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BU of 2xil by Molmil
The structure of cytochrome c peroxidase Compound I
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CYTOCHROME C PEROXIDASE, ...
Authors:Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2010-06-30
Release date:2010-07-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Nature of the ferryl heme in compounds I and II.
J. Biol. Chem., 286, 2011
2XI6
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BU of 2xi6 by Molmil
The structure of ascorbate peroxidase Compound I
Descriptor: ASCORBATE PEROXIDASE, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2010-06-29
Release date:2010-07-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Nature of the ferryl heme in compounds I and II.
J. Biol. Chem., 286, 2011
2XIH
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BU of 2xih by Molmil
The structure of ascorbate peroxidase Compound III
Descriptor: ASCORBATE PEROXIDASE, OXYGEN MOLECULE, POTASSIUM ION, ...
Authors:Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2010-06-29
Release date:2010-07-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Nature of the ferryl heme in compounds I and II.
J. Biol. Chem., 286, 2011
2XJ5
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BU of 2xj5 by Molmil
The structure of cytochrome c peroxidase Compound II
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTOCHROME C PEROXIDASE, MITOCHONDRIAL, ...
Authors:Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2010-07-02
Release date:2010-07-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Nature of the ferryl heme in compounds I and II.
J. Biol. Chem., 286, 2011
2XLY
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BU of 2xly by Molmil
Structural and Mechanistic Analysis of the Magnesium-Independent Aromatic Prenyltransferase CloQ from the Clorobiocin Biosynthetic Pathway
Descriptor: CLOQ
Authors:Metzger, U, Keller, S, Stevenson, C.E.M, Heide, L, Lawson, D.M.
Deposit date:2010-07-22
Release date:2010-10-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure and Mechanism of the Magnesium-Independent Aromatic Prenyltransferase Cloq from the Clorobiocin Biosynthetic Pathway.
J.Mol.Biol., 404, 2010
2XM7
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BU of 2xm7 by Molmil
Structural and Mechanistic Analysis of the Magnesium-Independent Aromatic Prenyltransferase CloQ from the Clorobiocin Biosynthetic Pathway
Descriptor: (2R)-2-HYDROXY-3-(4-HYDROXYPHENYL)PROPANOIC ACID, 1,2-ETHANEDIOL, CLOQ, ...
Authors:Metzger, U, Keller, S, Stevenson, C.E.M, Heide, L, Lawson, D.M.
Deposit date:2010-07-25
Release date:2010-10-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure and Mechanism of the Magnesium-Independent Aromatic Prenyltransferase Cloq from the Clorobiocin Biosynthetic Pathway.
J.Mol.Biol., 404, 2010
4WUB
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BU of 4wub by Molmil
N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM KCl condition
Descriptor: CHLORIDE ION, DNA gyrase subunit B, MAGNESIUM ION, ...
Authors:Hearnshaw, S.J, Chung, T.T, Stevenson, C.E.M, Maxwell, A, Lawson, D.M.
Deposit date:2014-10-31
Release date:2015-04-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The role of monovalent cations in the ATPase reaction of DNA gyrase
Acta Crystallogr.,Sect.D, 71, 2015
2XJ6
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BU of 2xj6 by Molmil
The structure of ferrous ascorbate peroxidase
Descriptor: ASCORBATE PEROXIDASE, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2010-07-02
Release date:2010-07-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Nature of the ferryl heme in compounds I and II.
J. Biol. Chem., 286, 2011
2Y31
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BU of 2y31 by Molmil
Simocyclinone C4 bound form of TetR-like repressor SimR
Descriptor: CALCIUM ION, CHLORIDE ION, PENTAETHYLENE GLYCOL, ...
Authors:Le, T.B.K, Stevenson, C.E.M, Fiedler, H.-P, Maxwell, A, Lawson, D.M, Buttner, M.J.
Deposit date:2010-12-17
Release date:2011-03-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the Tetr-Like Simocyclinone Efflux Pump Repressor, Simr, and the Mechanism of Ligand-Mediated Derepression.
J.Mol.Biol., 408, 2011

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