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PDB: 321 results

1I8U
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BU of 1i8u by Molmil
FAMILY 9 CARBOHYDRATE-BINDING MODULE FROM THERMOTOGA MARITIMA XYLANASE 10A
Descriptor: CALCIUM ION, ENDO-1,4-BETA-XYLANASE A
Authors:Notenboom, V, Boraston, A.B, Warren, R.A.J, Kilburn, D.G, Rose, D.R.
Deposit date:2001-03-16
Release date:2001-06-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of the family 9 carbohydrate-binding module from Thermotoga maritima xylanase 10A in native and ligand-bound forms.
Biochemistry, 40, 2001
6DRR
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BU of 6drr by Molmil
Crystal structure of Cj0485 dehydrogenase
Descriptor: 1,2-ETHANEDIOL, Short-chain dehydrogenase
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2018-06-12
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus.
Commun Biol, 3, 2020
6DS1
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BU of 6ds1 by Molmil
Crystal structure of Cj0485 dehydrogenase in complex with NADP+
Descriptor: GLYCEROL, MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2018-06-13
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.119 Å)
Cite:The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus.
Commun Biol, 3, 2020
5KD8
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BU of 5kd8 by Molmil
BT_4244 metallopeptidase in complex with Tn antigen.
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Metallopeptidase, NICKEL (II) ION, ...
Authors:Noach, I, Boraston, A.B.
Deposit date:2016-06-07
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Recognition of protein-linked glycans as a determinant of peptidase activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1I8A
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BU of 1i8a by Molmil
FAMILY 9 CARBOHYDRATE-BINDING MODULE FROM THERMOTOGA MARITIMA XYLANASE 10A WITH GLUCOSE
Descriptor: CALCIUM ION, ENDO-1,4-BETA-XYLANASE A, beta-D-glucopyranose
Authors:Notenboom, V, Boraston, A.B, Warren, R.A.J, Kilburn, D.G, Rose, D.R.
Deposit date:2001-03-12
Release date:2001-06-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of the family 9 carbohydrate-binding module from Thermotoga maritima xylanase 10A in native and ligand-bound forms.
Biochemistry, 40, 2001
1I82
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BU of 1i82 by Molmil
FAMILY 9 CARBOHYDRATE-BINDING MODULE FROM THERMOTOGA MARITIMA XYLANASE 10A WITH CELLOBIOSE
Descriptor: CALCIUM ION, ENDO-1,4-BETA-XYLANASE A, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Notenboom, V, Boraston, A.B, Warren, R.A.J, Kilburn, D.G, Rose, D.R.
Deposit date:2001-03-12
Release date:2001-06-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of the family 9 carbohydrate-binding module from Thermotoga maritima xylanase 10A in native and ligand-bound forms.
Biochemistry, 40, 2001
6DMS
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BU of 6dms by Molmil
Endo-fucoidan hydrolase MfFcnA4_H294Q from glycoside hydrolase family 107
Descriptor: 1,2-ETHANEDIOL, Alpha-1,4-endofucoidanase, CALCIUM ION
Authors:Vickers, C, Abe, K, Salama-Alber, O, Boraston, A.B.
Deposit date:2018-06-05
Release date:2018-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
J. Biol. Chem., 293, 2018
3QT3
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Analysis of a New Family of Widely Distributed Metal-independent alpha-Mannosidases Provides Unique Insight into the Processing of N-linked Glycans, Clostridium perfringens CPE0426 apo-structure
Descriptor: 1,2-ETHANEDIOL, Putative uncharacterized protein CPE0426
Authors:Gregg, K.J, Zandberg, W.F, Hehemann, J.-H, Whitworth, G.E, Deng, L.E, Vocadlo, D.J, Boraston, A.B.
Deposit date:2011-02-22
Release date:2011-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Analysis of a New Family of Widely Distributed Metal-independent {alpha}-Mannosidases Provides Unique Insight into the Processing of N-Linked Glycans.
J.Biol.Chem., 286, 2011
3REN
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BU of 3ren by Molmil
CPF_2247, a novel alpha-amylase from Clostridium perfringens
Descriptor: 1,2-ETHANEDIOL, Glycosyl hydrolase, family 8, ...
Authors:Ficko-Blean, E, Stuart, C.P, Boraston, A.B.
Deposit date:2011-04-04
Release date:2011-05-18
Last modified:2013-09-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of CPF_2247, a novel alpha-amylase from Clostridium perfringens.
Proteins, 79, 2011
3QRY
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BU of 3qry by Molmil
Analysis of a new family of widely distributed metal-independent alpha mannosidases provides unique insight into the processing of N-linked glycans, Streptococcus pneumoniae SP_2144 1-deoxymannojirimycin complex
Descriptor: 1,2-ETHANEDIOL, 1-DEOXYMANNOJIRIMYCIN, Putative uncharacterized protein
Authors:Gregg, K.J, Zandberg, W.F, Hehemann, J.-H, Whitworth, G.E, Deng, L.E, Vocadlo, D.J, Boraston, A.B.
Deposit date:2011-02-18
Release date:2011-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Analysis of a New Family of Widely Distributed Metal-independent {alpha}-Mannosidases Provides Unique Insight into the Processing of N-Linked Glycans.
J.Biol.Chem., 286, 2011
3QSP
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BU of 3qsp by Molmil
Analysis of a new family of widely distributed metal-independent alpha mannosidases provides unique insight into the processing of N-linked glycans, Streptococcus pneumoniae SP_2144 non-productive substrate complex with alpha-1,6-mannobiose
Descriptor: 1,2-ETHANEDIOL, Putative uncharacterized protein, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose
Authors:Gregg, K.J, Zandberg, W.F, Hehemann, J.-H, Whitworth, G.E, Deng, L.E, Vocadlo, D.J, Boraston, A.B.
Deposit date:2011-02-21
Release date:2011-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Analysis of a New Family of Widely Distributed Metal-independent {alpha}-Mannosidases Provides Unique Insight into the Processing of N-Linked Glycans.
J.Biol.Chem., 286, 2011
7JW4
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BU of 7jw4 by Molmil
Crystal structure of PdGH110B in complex with D-galactose
Descriptor: CHLORIDE ION, Glycoside hydrolase family 110, NICKEL (II) ION, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2020-08-24
Release date:2020-11-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.342 Å)
Cite:The structure of a family 110 glycoside hydrolase provides insight into the hydrolysis of alpha-1,3-galactosidic linkages in lambda-carrageenan and blood group antigens.
J.Biol.Chem., 295, 2020
3QT9
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BU of 3qt9 by Molmil
Analysis of a new family of widely distributed metal-independent alpha mannosidases provides unique insight into the processing of N-linked glycans, Clostridium perfringens CPE0426 complexed with alpha-1,6-linked 1-thio-alpha-mannobiose
Descriptor: 1,2-ETHANEDIOL, Putative uncharacterized protein CPE0426, alpha-D-mannopyranose-(1-6)-6-thio-alpha-D-mannopyranose
Authors:Gregg, K.J, Zandberg, W.F, Hehemann, J.-H, Whitworth, G.E, Deng, L.E, Vocadlo, D.J, Boraston, A.B.
Deposit date:2011-02-22
Release date:2011-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Analysis of a New Family of Widely Distributed Metal-independent {alpha}-Mannosidases Provides Unique Insight into the Processing of N-Linked Glycans.
J.Biol.Chem., 286, 2011
5T99
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BU of 5t99 by Molmil
Crystal structure of BuGH2Awt in complex with Galactoisofagomine
Descriptor: 1,2-ETHANEDIOL, D-galacto-isofagomine, Glycoside Hydrolase
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2016-09-09
Release date:2017-09-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.
Nat Commun, 9, 2018
7JWF
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BU of 7jwf by Molmil
Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2020-08-25
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.187 Å)
Cite:The structure of a family 110 glycoside hydrolase provides insight into the hydrolysis of alpha-1,3-galactosidic linkages in lambda-carrageenan and blood group antigens.
J.Biol.Chem., 295, 2020
5T7A
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BU of 5t7a by Molmil
Crystal structure of Br derivative BhCBM56
Descriptor: 1,2-ETHANEDIOL, BH0236 protein, BROMIDE ION
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2016-09-02
Release date:2017-08-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Properties of a family 56 carbohydrate-binding module and its role in the recognition and hydrolysis of beta-1,3-glucan.
J. Biol. Chem., 292, 2017
7JTV
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BU of 7jtv by Molmil
Structure of IMPa from Pseudomonas aeruginosa in complex with an O-glycopeptide
Descriptor: 1,2-ETHANEDIOL, GLU-ALA-PRO-SER-ALA, Immunomodulating metalloprotease, ...
Authors:Noach, I, Boraston, A.B.
Deposit date:2020-08-18
Release date:2020-12-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural evidence for a proline-specific glycopeptide recognition domain in an O-glycopeptidase.
Glycobiology, 31, 2021
5TA5
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BU of 5ta5 by Molmil
Crystal structure of BuGH86wt in complex with neoagarooctaose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2016-09-09
Release date:2017-09-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.
Nat Commun, 9, 2018
5T9X
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Crystal structure of BuGH16Bwt
Descriptor: Glycoside Hydrolase, IMIDAZOLE, SODIUM ION
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2016-09-09
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.
Nat Commun, 9, 2018
2CDO
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BU of 2cdo by Molmil
structure of agarase carbohydrate binding module in complex with neoagarohexaose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose, BETA-AGARASE 1, ...
Authors:Henshaw, J, Horne, A, Van Bueren, A.L, Money, V.A, Bolam, D.N, Czjzek, M, Weiner, R.M, Hutcheson, S.W, Davies, G.J, Boraston, A.B, Gilbert, H.J.
Deposit date:2006-01-25
Release date:2006-02-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Family 6 Carbohydrate Binding Modules in Beta-Agarases Display Exquisite Selectivity for the Non- Reducing Termini of Agarose Chains.
J.Biol.Chem., 281, 2006
7JNB
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BU of 7jnb by Molmil
The structure of CBM32-1 and CBM32-2 domains from Clostridium perfringens ZmpB in complex with GalNAc
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, F5/8 type C domain protein, ...
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2020-08-04
Release date:2021-02-03
Last modified:2021-08-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Architecturally complex O -glycopeptidases are customized for mucin recognition and hydrolysis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7JND
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BU of 7jnd by Molmil
The structure of CBM32-1 and CBM32-2 domains from Clostridium perfringens ZmpB
Descriptor: CALCIUM ION, F5/8 type C domain protein, GLYCEROL
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2020-08-04
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Architecturally complex O -glycopeptidases are customized for mucin recognition and hydrolysis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7JNF
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BU of 7jnf by Molmil
The structure of CBM32-1 and CBM32-2 domains from Clostridium perfringens ZmpB in complex with GalNAc
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, F5/8 type C domain protein, ...
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2020-08-04
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Architecturally complex O -glycopeptidases are customized for mucin recognition and hydrolysis.
Proc.Natl.Acad.Sci.USA, 118, 2021
1KNM
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BU of 1knm by Molmil
Streptomyces lividans Xylan Binding Domain cbm13 in Complex with Lactose
Descriptor: ENDO-1,4-BETA-XYLANASE A, GLYCEROL, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Notenboom, V, Boraston, A.B, Williams, S.J, Kilburn, D.G, Rose, D.R.
Deposit date:2001-12-19
Release date:2002-06-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution crystal structures of the lectin-like xylan binding domain from Streptomyces lividans xylanase 10A with bound substrates reveal a novel mode of xylan binding.
Biochemistry, 41, 2002
2CDP
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Structure of a CBM6 in complex with neoagarohexaose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose, BETA-AGARASE 1, ...
Authors:Henshaw, J, Horne, A, Van Bueren, A.L, Money, V.A, Bolam, D.N, Czjzek, M, Weiner, R.M, Hutcheson, S.W, Davies, G.J, Boraston, A.B, Gilbert, H.J.
Deposit date:2006-01-26
Release date:2006-02-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Family 6 Carbohydrate Binding Modules in Beta-Agarases Display Exquisite Selectivity for the Non- Reducing Termini of Agarose Chains.
J.Biol.Chem., 281, 2006

221051

數據於2024-06-12公開中

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