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PDB: 321 件

2J22
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Structure of a Streptococcus pneumoniae fucose binding module, SpX-3
分子名称: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN, GLYCEROL
著者Boraston, A.B, Wang, D, Burke, R.D.
登録日2006-08-15
公開日2006-09-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor
J.Biol.Chem., 281, 2006
2V73
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BU of 2v73 by Molmil
The structure of the family 40 CBM from C. perfringens NanJ in complex with a sialic acid containing molecule
分子名称: CALCIUM ION, N-acetyl-alpha-neuraminic acid, PUTATIVE EXO-ALPHA-SIALIDASE
著者Boraston, A.B, Ficko-Blean, E, Healey, M.
登録日2007-07-25
公開日2007-08-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Carbohydrate Recognition by a Large Sialidase Toxin from Clostridium Perfringens.
Biochemistry, 46, 2007
2V72
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BU of 2v72 by Molmil
The structure of the family 32 CBM from C. perfringens NanJ in complex with galactose
分子名称: CALCIUM ION, EXO-ALPHA-SIALIDASE, beta-D-galactopyranose
著者Boraston, A.B, Ficko-Blean, E, Healey, M.
登録日2007-07-25
公開日2007-08-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Carbohydrate Recognition by a Large Sialidase Toxin from Clostridium Perfringens.
Biochemistry, 46, 2007
4UTF
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BU of 4utf by Molmil
Structure of the GH99 endo-alpha-mannosidase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-isofagomine and alpha- 1,2-mannobiose
分子名称: 1,2-ETHANEDIOL, 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, GLYCOSYL HYDROLASE FAMILY 71, ...
著者Cuskin, F, Lowe, E.C, Temple, M.J, Zhu, Y, Pudlo, N.A, Cameron, E.A, Urs, K, Thompson, A.J, Cartmell, A, Rogowski, A, Tolbert, T, Piens, K, Bracke, D, Vervecken, W, Hakki, Z, Speciale, G, Munoz-Munoz, J.L, Pena, M.J, McLean, R, Suits, M.D, Boraston, A.B, Atherly, T, Ziemer, C.J, Williams, S.J, Davies, G.J, Abbott, D.W, Martens, E.C, Gilbert, H.J.
登録日2014-07-21
公開日2014-12-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Human Gut Bacteroidetes Can Utilize Yeast Mannan Through a Selfish Mechanism.
Nature, 517, 2015
4UAP
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BU of 4uap by Molmil
X-ray structure of GH31 CBM32-2 bound to GalNAc
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, GLYCEROL, ...
著者Grondin, J.M, Abe, K, Boraston, A.B, Smith, S.P.
登録日2014-08-11
公開日2015-10-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
PLoS ONE, 12, 2017
8DF2
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BU of 8df2 by Molmil
The structure of the 'ALT' construct of the Amuc_1438 glycopeptidase
分子名称: CALCIUM ION, NPCBM/NEW2 domain-containing protein, SODIUM ION, ...
著者Medley, B.J, Boraston, A.B.
登録日2022-06-21
公開日2022-08-31
最終更新日2022-10-12
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
J.Biol.Chem., 298, 2022
8DEK
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BU of 8dek by Molmil
The structure of the glycopeptidase catalytic domain including the linker of Amuc_1438
分子名称: 1,2-ETHANEDIOL, NPCBM/NEW2 domain-containing protein, SODIUM ION, ...
著者Medley, B.J, Boraston, A.B.
登録日2022-06-20
公開日2022-08-31
最終更新日2022-10-12
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
J.Biol.Chem., 298, 2022
4P5Y
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BU of 4p5y by Molmil
Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with N-acetylgalactosamine
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, Glycosyl hydrolase, ...
著者Grondin, J.M, Allingham, J.S, Boraston, A.B, Smith, S.P.
登録日2014-03-04
公開日2015-10-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
PLoS ONE, 12, 2017
1OIM
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BU of 1oim by Molmil
Family 1 b-glucosidase from Thermotoga maritima
分子名称: 1-DEOXYNOJIRIMYCIN, BETA-GLUCOSIDASE A
著者Gloster, T, Zechel, D.L, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
登録日2003-06-19
公開日2003-11-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003
1OIF
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BU of 1oif by Molmil
Family 1 b-glucosidase from Thermotoga maritima
分子名称: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, BETA-GLUCOSIDASE
著者Gloster, T, Zechel, D, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
登録日2003-06-16
公開日2003-11-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003
6BIA
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BU of 6bia by Molmil
Crystal structure of Ps i-CgsB
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CITRIC ACID, ...
著者Hettle, A.G, Boraston, A.B.
登録日2017-11-01
公開日2018-03-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Molecular Basis of Polysaccharide Sulfatase Activity and a Nomenclature for Catalytic Subsites in this Class of Enzyme.
Structure, 26, 2018
4TXW
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BU of 4txw by Molmil
Crystal structure of CBM32-4 from the Clostridium perfringens NagH
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Hyaluronoglucosaminidase
著者Grondin, J.M, Ficko-Blean, E, Boraston, A.B, Smith, S.P.
登録日2014-07-07
公開日2015-12-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Solution Structure and Dynamics of Full-length GH84A, a multimodular B-N-acetylglucosaminidase from Clostridium perfringens
To Be Published
6XT1
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BU of 6xt1 by Molmil
The structure of the M60 catalytic domain from Clostridium perfringens ZmpC in complex the sialyl T antigen
分子名称: 1,2-ETHANEDIOL, SERINE, ZINC ION, ...
著者Pluvinage, B, Boraston, A.B.
登録日2020-07-16
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Molecular insights into architecturally complex glycopeptidases
Proc.Natl.Acad.Sci.USA, 2021
6XSX
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BU of 6xsx by Molmil
The structure of the catalytic module of the metalloprotease ZmpA from Clostridium perfringens
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ZmpA Glycopeptidase
著者Pluvinage, B, Boraston, A.B.
登録日2020-07-16
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular insights into architecturally complex glycopeptidases
Proc.Natl.Acad.Sci.USA, 2021
6XJ9
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BU of 6xj9 by Molmil
Structure of PfGH50B
分子名称: 1,2-ETHANEDIOL, Agarase
著者Pluvinage, B, Boraston, A.B.
登録日2020-06-23
公開日2020-09-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structure of PfGH50B, an agarase from the marine bacterium Pseudoalteromonas fuliginea PS47
Acta Crystallogr.,Sect.F, 76, 2020
1I8U
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BU of 1i8u by Molmil
FAMILY 9 CARBOHYDRATE-BINDING MODULE FROM THERMOTOGA MARITIMA XYLANASE 10A
分子名称: CALCIUM ION, ENDO-1,4-BETA-XYLANASE A
著者Notenboom, V, Boraston, A.B, Warren, R.A.J, Kilburn, D.G, Rose, D.R.
登録日2001-03-16
公開日2001-06-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of the family 9 carbohydrate-binding module from Thermotoga maritima xylanase 10A in native and ligand-bound forms.
Biochemistry, 40, 2001
6XSZ
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BU of 6xsz by Molmil
The structure of the M60 catalytic domain from Clostridium perfringens ZmpC
分子名称: 1,2-ETHANEDIOL, ZINC ION, ZmpC Glycopeptidase
著者Pluvinage, B, Boraston, A.B.
登録日2020-07-16
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Molecular insights into architecturally complex glycopeptidases
Proc.Natl.Acad.Sci.USA, 2021
6DRR
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BU of 6drr by Molmil
Crystal structure of Cj0485 dehydrogenase
分子名称: 1,2-ETHANEDIOL, Short-chain dehydrogenase
著者Pluvinage, B, Boraston, A.B.
登録日2018-06-12
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus.
Commun Biol, 3, 2020
6DS1
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BU of 6ds1 by Molmil
Crystal structure of Cj0485 dehydrogenase in complex with NADP+
分子名称: GLYCEROL, MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Pluvinage, B, Boraston, A.B.
登録日2018-06-13
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.119 Å)
主引用文献The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus.
Commun Biol, 3, 2020
6DLH
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BU of 6dlh by Molmil
Endo-fucoidan hydrolase MfFcnA4 from glycoside hydrolase family 107
分子名称: 1,2-ETHANEDIOL, Alpha-1,4-endofucoidanase, CALCIUM ION, ...
著者Vickers, C, Abe, K, Salama-Alber, O, Boraston, A.B.
登録日2018-06-01
公開日2018-10-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
J. Biol. Chem., 293, 2018
1I82
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BU of 1i82 by Molmil
FAMILY 9 CARBOHYDRATE-BINDING MODULE FROM THERMOTOGA MARITIMA XYLANASE 10A WITH CELLOBIOSE
分子名称: CALCIUM ION, ENDO-1,4-BETA-XYLANASE A, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Notenboom, V, Boraston, A.B, Warren, R.A.J, Kilburn, D.G, Rose, D.R.
登録日2001-03-12
公開日2001-06-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of the family 9 carbohydrate-binding module from Thermotoga maritima xylanase 10A in native and ligand-bound forms.
Biochemistry, 40, 2001
1I8A
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BU of 1i8a by Molmil
FAMILY 9 CARBOHYDRATE-BINDING MODULE FROM THERMOTOGA MARITIMA XYLANASE 10A WITH GLUCOSE
分子名称: CALCIUM ION, ENDO-1,4-BETA-XYLANASE A, beta-D-glucopyranose
著者Notenboom, V, Boraston, A.B, Warren, R.A.J, Kilburn, D.G, Rose, D.R.
登録日2001-03-12
公開日2001-06-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of the family 9 carbohydrate-binding module from Thermotoga maritima xylanase 10A in native and ligand-bound forms.
Biochemistry, 40, 2001
6ORH
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BU of 6orh by Molmil
Crystal structure of SpGH29
分子名称: 1,2-ETHANEDIOL, Glycoside hydrolase, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Pluvinage, B, Boraston, A.B.
登録日2019-04-30
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Two complementary alpha-fucosidases fromStreptococcus pneumoniaepromote complete degradation of host-derived carbohydrate antigens.
J.Biol.Chem., 294, 2019
6ORG
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BU of 6org by Molmil
Crystal structure of SpGH29
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Pluvinage, B, Boraston, A.B.
登録日2019-04-30
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Two complementary alpha-fucosidases fromStreptococcus pneumoniaepromote complete degradation of host-derived carbohydrate antigens.
J.Biol.Chem., 294, 2019
6ORF
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BU of 6orf by Molmil
Crystal structure of SpGH29
分子名称: 1,2-ETHANEDIOL, SpGH29, alpha-L-fucopyranose-(1-3)-[beta-D-galactopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Pluvinage, B, Boraston, A.B.
登録日2019-04-30
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Two complementary alpha-fucosidases fromStreptococcus pneumoniaepromote complete degradation of host-derived carbohydrate antigens.
J.Biol.Chem., 294, 2019

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件を2024-05-15に公開中

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