Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 109 results

6CGN
DownloadVisualize
BU of 6cgn by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit dAMP-bound (pH 7)
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, PHOSPHATE ION, ...
Authors:Maggiolo, A.O, Boal, A.K.
Deposit date:2018-02-20
Release date:2018-05-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:An endogenous dAMP ligand inBacillus subtilisclass Ib RNR promotes assembly of a noncanonical dimer for regulation by dATP.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CWO
DownloadVisualize
BU of 6cwo by Molmil
X-ray crystal structure of Flavobacterium johnsoniae dimanganese(II) ribonucleotide reductase beta subunit (aerobic)
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, Ribonucleotide reductase
Authors:Maggiolo, A.O, Rose, H.R, Boal, A.K.
Deposit date:2018-03-30
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural Basis for Superoxide Activation of Flavobacterium johnsoniae Class I Ribonucleotide Reductase and for Radical Initiation by Its Dimanganese Cofactor.
Biochemistry, 57, 2018
6CWP
DownloadVisualize
BU of 6cwp by Molmil
X-ray crystal structure of Flavobacterium johnsoniae dimanganese(II) ribonucleotide reductase beta subunit (anaerobic)
Descriptor: MANGANESE (II) ION, Ribonucleotide reductase, VAL-GLU-TYR-THR-LYS-HIS
Authors:Maggiolo, A.O, Rose, H.R, Boal, A.K.
Deposit date:2018-03-30
Release date:2018-04-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural Basis for Superoxide Activation of Flavobacterium johnsoniae Class I Ribonucleotide Reductase and for Radical Initiation by Its Dimanganese Cofactor.
Biochemistry, 57, 2018
6DAW
DownloadVisualize
BU of 6daw by Molmil
X-ray crystal structure of NapI L-arginine desaturase bound to Fe(II), L-arginine, and acetate
Descriptor: ACETATE ION, ARGININE, FE (II) ION, ...
Authors:Mitchell, A.J, Dunham, N.P, Boal, A.K.
Deposit date:2018-05-02
Release date:2018-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018
6DQX
DownloadVisualize
BU of 6dqx by Molmil
Actinobacillus ureae class Id ribonucleotide reductase alpha subunit
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:McBride, M.J, Palowitch, G.M, Boal, A.K.
Deposit date:2018-06-11
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structures of Class Id Ribonucleotide Reductase Catalytic Subunits Reveal a Minimal Architecture for Deoxynucleotide Biosynthesis.
Biochemistry, 58, 2019
6DB2
DownloadVisualize
BU of 6db2 by Molmil
X-ray crystal structure of VioC bound to vanadyl ion, L-homoarginine, and succinate
Descriptor: 1,2-ETHANEDIOL, Alpha-ketoglutarate-dependent L-arginine hydroxylase, L-HOMOARGININE, ...
Authors:Dunham, N.P, Mitchell, A.J, Boal, A.K.
Deposit date:2018-05-02
Release date:2018-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018
6DAZ
DownloadVisualize
BU of 6daz by Molmil
X-ray crystal structure of VioC bound to Fe(II), 3S-hydroxy-L-homoarginine, and succinate
Descriptor: (3S)-N~6~-carbamimidoyl-3-hydroxy-L-lysine, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
Authors:Dunham, N.P, Mitchell, A.J, Boal, A.K.
Deposit date:2018-05-02
Release date:2018-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018
6DQW
DownloadVisualize
BU of 6dqw by Molmil
Flavobacterium johnsoniae class Id ribonucleotide reductase alpha subuint
Descriptor: Ribonucleoside-diphosphate reductase, alpha chain
Authors:Maggiolo, A.O, Boal, A.K.
Deposit date:2018-06-11
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of Class Id Ribonucleotide Reductase Catalytic Subunits Reveal a Minimal Architecture for Deoxynucleotide Biosynthesis.
Biochemistry, 58, 2019
6DAX
DownloadVisualize
BU of 6dax by Molmil
X-ray crystal structure of VioC bound to Fe(II), L-homoarginine, and 2-oxoglutarate
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
Authors:Dunham, N.P, Mitchell, A.J, Boal, A.K.
Deposit date:2018-05-02
Release date:2018-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018

220760

PDB entries from 2024-06-05

PDB statisticsPDBj update infoContact PDBjnumon