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PDB: 36 results

8CGD
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BU of 8cgd by Molmil
Clindamycin bound to the 50S subunit
Descriptor: 23S rRNA, 50S ribosomal protein L15, 50S ribosomal protein L25, ...
Authors:Paternoga, H, Koller, T.O, Beckert, B, Wilson, D.N.
Deposit date:2023-02-03
Release date:2023-07-26
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (1.98 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CEU
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BU of 8ceu by Molmil
Retapamulin and Capreomycin bound to the 50S subunit
Descriptor: 23S rRNA, 50S ribosomal protein L15, 50S ribosomal protein L25, ...
Authors:Paternoga, H, Beckert, B, Wilson, D.N.
Deposit date:2023-02-02
Release date:2023-07-26
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (1.83 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8AQW
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BU of 8aqw by Molmil
BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (local)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2,Ig gamma-2A chain C region, ...
Authors:Lau, K, Ni, D, Beckert, B, Nazarov, S, Myasnikov, A, Pojer, F, Stahlberg, H, Uchikawa, E.
Deposit date:2022-08-13
Release date:2023-03-15
Last modified:2023-04-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures and binding of mouse and human ACE2 to SARS-CoV-2 variants of concern indicate that mutations enabling immune escape could expand host range.
Plos Pathog., 19, 2023
8CGK
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BU of 8cgk by Molmil
Lincomycin and Avilamycin bound to the 50S subunit
Descriptor: (2R,3S,4R,6S)-4-hydroxy-6-{[(2R,3aR,4R,4'R,5'S,6S,6'R,7aR)-4'-hydroxy-6-{[(2S,3R,4R,5S,6R)-3-hydroxy-2-{[(2R,3S,4S,5S,6S)-4-hydroxy-6-({(2R,3aS,3a'R,6S,6'R,7R,7'R,7aR,7a'R)-7'-hydroxy-7'-[(1S)-1-hydroxyethyl]-6'-methyl-7-[(2-methylpropanoyl)oxy]octahydro-4H-2,4'-spirobi[[1,3]dioxolo[4,5-c]pyran]-6-yl}oxy)-5-methoxy-2-(methoxymethyl)tetrahydro-2H-pyran-3-yl]oxy}-5-methoxy-6-methyltetrahydro-2H-pyran-4-yl]oxy}-4,6',7a-trimethyloctahydro-4H-spiro[1,3-dioxolo[4,5-c]pyran-2,2'-pyran]-5'-yl]oxy}-2-methyltetrahydro-2H-pyran-3-yl 3,5-dichloro-4-hydroxy-2-methoxy-6-methylbenzoate (non-preferred name), 23S rRNA, 50S ribosomal protein L15, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Beckert, B, Wilson, D.N.
Deposit date:2023-02-05
Release date:2023-07-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (1.64 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CEP
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BU of 8cep by Molmil
Kasugamycin bound to the 30S body
Descriptor: (1S,2R,3S,4R,5S,6S)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL 2-AMINO-4-{[CARBOXY(IMINO)METHYL]AMINO}-2,3,4,6-TETRADEOXY-ALPHA-D-ARABINO-HEXOPYRANOSIDE, 16S rRNA, 23S rRNA, ...
Authors:Paternoga, H, Beckert, B, Wilson, D.N.
Deposit date:2023-02-02
Release date:2023-07-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.04 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CGR
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BU of 8cgr by Molmil
Apramycin bound to the 30S body
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S16, ...
Authors:Paternoga, H, Koller, T.O, Beckert, B, Wilson, D.N.
Deposit date:2023-02-06
Release date:2023-07-26
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.12 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CAZ
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BU of 8caz by Molmil
empty 30S head
Descriptor: 16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S7, ...
Authors:Paternoga, H, Beckert, B, Wilson, D.N.
Deposit date:2023-01-24
Release date:2023-07-26
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CF1
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BU of 8cf1 by Molmil
Tetracycline bound to the 30S head
Descriptor: 16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S7, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Beckert, B, Wilson, D.N.
Deposit date:2023-02-02
Release date:2023-07-26
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (1.82 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CGJ
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BU of 8cgj by Molmil
Streptomycin bound to the 30S body
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S16, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Beckert, B, Wilson, D.N.
Deposit date:2023-02-05
Release date:2023-07-26
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (1.79 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CF8
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BU of 8cf8 by Molmil
Eravacycline bound to the 30S head
Descriptor: 16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S7, ...
Authors:Paternoga, H, Koller, T.O, Beckert, B, Wilson, D.N.
Deposit date:2023-02-03
Release date:2023-08-02
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8BFN
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BU of 8bfn by Molmil
E. coli Wadjet JetABC dimer of dimers
Descriptor: ADENOSINE-5'-DIPHOSPHATE, JetA, JetB, ...
Authors:Roisne-Hamelin, F, Beckert, B, Myasnikov, A, Li, Y, Gruber, S.
Deposit date:2022-10-26
Release date:2022-12-14
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:DNA-measuring Wadjet SMC ATPases restrict smaller circular plasmids by DNA cleavage.
Mol.Cell, 82, 2022
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PDB entries from 2024-07-03

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