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PDB: 87 results
3D0U
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BU of 3d0u by Molmil
Crystal Structure of Lysine Riboswitch Bound to Lysine
Descriptor: IRIDIUM HEXAMMINE ION, LYSINE, Lysine Riboswitch RNA
Authors:Garst, A.D, Heroux, A, Rambo, R.P, Batey, R.T.
Deposit date:2008-05-02
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the lysine riboswitch regulatory mRNA element.
J.Biol.Chem., 283, 2008
3DS7
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BU of 3ds7 by Molmil
Structure of an RNA-2'-deoxyguanosine complex
Descriptor: 2'-DEOXY-GUANOSINE, 67-MER, ACETATE ION, ...
Authors:Edwards, A.L, Batey, R.T.
Deposit date:2008-07-11
Release date:2009-02-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A structural basis for the recognition of 2'-deoxyguanosine by the purine riboswitch.
J.Mol.Biol., 385, 2009
3FO4
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BU of 3fo4 by Molmil
Crystal structure of guanine riboswitch C74U mutant bound to 6-chloroguanine
Descriptor: 6-chloroguanine, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Gilbert, S.D, Batey, R.T.
Deposit date:2008-12-27
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs.
Structure, 17, 2009
3G4M
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BU of 3g4m by Molmil
Crystal structure of guanine riboswitch bound to 2-aminopurine
Descriptor: 9H-purin-2-amine, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Gilbert, S.D, Batey, R.T.
Deposit date:2009-02-04
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs.
Structure, 17, 2009
4ERL
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BU of 4erl by Molmil
Crystal structure of the lysine riboswitch bound to a lysine-glycine dipeptide
Descriptor: GLYCINE, LYSINE, Lysine riboswitch RNA
Authors:Garst, A.D, Porter, E, Batey, R.T.
Deposit date:2012-04-20
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Insights into the regulatory landscape of the lysine riboswitch.
J.Mol.Biol., 423, 2012
4ERJ
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BU of 4erj by Molmil
Crystal structure of the lysine riboswitch bound to a 6-aminocaproic acid
Descriptor: 6-AMINOHEXANOIC ACID, Lysine riboswitch RNA
Authors:Garst, A.D, Porter, E, Batey, R.T.
Deposit date:2012-04-20
Release date:2012-07-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Insights into the regulatory landscape of the lysine riboswitch.
J.Mol.Biol., 423, 2012
4FE5
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BU of 4fe5 by Molmil
Crystal structure of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), HYPOXANTHINE, ...
Authors:Stoddard, C.D, Trausch, J.J, Widmann, J, Marcano, J, Knight, R, Batey, R.T.
Deposit date:2012-05-29
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structure of a natural guanine-responsive riboswitch complexed with the metabolite hypoxanthine.
Nature, 432, 2004
4FEJ
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BU of 4fej by Molmil
Crystal structure of the A24U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthine
Descriptor: A24U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domain, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Stoddard, C.D, Trausch, J.J, Widmann, J, Marcano, J, Knight, R, Batey, R.T.
Deposit date:2012-05-30
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch.
J.Mol.Biol., 425, 2013
4FEN
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BU of 4fen by Molmil
Crystal structure of the A24U/U25A/A46G mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthine
Descriptor: A24U/U25A/A46G mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domain, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Stoddard, C.D, Trausch, J.J, Widmann, J, Marcano, J, Knight, R, Batey, R.T.
Deposit date:2012-05-30
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch.
J.Mol.Biol., 425, 2013
4FRN
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BU of 4frn by Molmil
Crystal structure of the cobalamin riboswitch regulatory element
Descriptor: BARIUM ION, Cobalamin riboswitch aptamer domain, Hydroxocobalamin
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-06-26
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
4FEP
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BU of 4fep by Molmil
Crystal structure of the A24U/U25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurine
Descriptor: 9H-PURINE-2,6-DIAMINE, A24U/U25A/A46G/C74U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domain, COBALT HEXAMMINE(III)
Authors:Stoddard, C.D, Trausch, J.J, Widmann, J, Marcano, J, Knight, R, Batey, R.T.
Deposit date:2012-05-30
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch.
J.Mol.Biol., 425, 2013
4FEO
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BU of 4feo by Molmil
Crystal structure of the AU25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurine
Descriptor: 9H-PURINE-2,6-DIAMINE, COBALT HEXAMMINE(III), U25A/A46G/C74U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domain
Authors:Stoddard, C.D, Trausch, J.J, Widmann, J, Marcano, J, Knight, R, Batey, R.T.
Deposit date:2012-05-30
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch.
J.Mol.Biol., 425, 2013
4FRG
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BU of 4frg by Molmil
Crystal structure of the cobalamin riboswitch aptamer domain
Descriptor: Hydroxocobalamin, IRIDIUM (III) ION, MAGNESIUM ION, ...
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-06-26
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
4GMA
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BU of 4gma by Molmil
Crystal structure of the adenosylcobalamin riboswitch
Descriptor: Adenosylcobalamin, Adenosylcobalamin riboswitch
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-08-15
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.94 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
4FEL
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BU of 4fel by Molmil
Crystal structure of the U25A/A46G mutant of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), HYPOXANTHINE, ...
Authors:Stoddard, C.D, Trausch, J.J, Widmann, J, Marcano, J, Knight, R, Batey, R.T.
Deposit date:2012-05-30
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch.
J.Mol.Biol., 425, 2013
2EES
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BU of 2ees by Molmil
Guanine riboswitch A21U, U75A mutant bound to hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ...
Authors:Gilbert, S.D, Edwards, A.L, Batey, R.T.
Deposit date:2007-02-18
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
2EET
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BU of 2eet by Molmil
Guanine Riboswitch A21G, U75C mutant bound to hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), Guanine Riboswitch, ...
Authors:Gilbert, S.D, Edwards, A.L, Batey, R.T.
Deposit date:2007-02-18
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
2B57
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BU of 2b57 by Molmil
Guanine Riboswitch C74U mutant bound to 2,6-diaminopurine
Descriptor: 65-MER, 9H-PURINE-2,6-DIAMINE, ACETATE ION, ...
Authors:Gilbert, S.D, Stoddard, C.D, Wise, S.J, Batey, R.T.
Deposit date:2005-09-27
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Thermodynamic and kinetic characterization of ligand binding to the purine riboswitch aptamer domain.
J.Mol.Biol., 359, 2006
2EEU
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BU of 2eeu by Molmil
Guanine riboswitch U22A, A52U mutant bound to hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ...
Authors:Gilbert, S.D, Love, C.E, Batey, R.T.
Deposit date:2007-02-19
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
2EEV
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BU of 2eev by Molmil
Guanine riboswitch U22C, A52G mutant bound to hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), HYPOXANTHINE, ...
Authors:Gilbert, S.D, Love, C.E, Batey, R.T.
Deposit date:2007-02-19
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
2EEW
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BU of 2eew by Molmil
Guanine Riboswitch U47C mutant bound to hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ...
Authors:Gilbert, S.D, Love, C.E, Batey, R.T.
Deposit date:2007-02-19
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
3GES
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BU of 3ges by Molmil
Crystal structure of the guanine riboswitch C74U mutant bound to 6-O-methylguanine
Descriptor: 6-O-methylguanine, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Gilbert, S.D, Batey, R.T.
Deposit date:2009-02-26
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs
Structure, 17, 2009
3GX5
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BU of 3gx5 by Molmil
Crystal structure of T. tencongensis SAM-I riboswitch variant A94G/U34 bound with SAM
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (94-MER), ...
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-04-01
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010
3GQU
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BU of 3gqu by Molmil
Pyrococcus Horikoshii NOP5 RNA Binding Domain
Descriptor: IODIDE ION, NOP5P PROTEIN
Authors:Reyes, F.E, Hardin, J.W, Batey, R.T.
Deposit date:2009-03-24
Release date:2009-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Analysis of a Critical Interaction within the Archaeal Box C/D Small Ribonucleoprotein Complex
J.Biol.Chem., 284, 2009
3GOT
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BU of 3got by Molmil
Guanine riboswitch C74U mutant bound to 2-fluoroadenine.
Descriptor: 2-fluoroadenine, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Gilbert, S.D, Reyes, F.E, Batey, R.T.
Deposit date:2009-03-20
Release date:2009-06-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs
Structure, 17, 2009

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