Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 58 件

3RZ2
DownloadVisualize
BU of 3rz2 by Molmil
Crystal of Prl-1 complexed with peptide
分子名称: Prl-1 (PTP4A1), Protein tyrosine phosphatase type IVA 1
著者Zhang, Z.-Y, Liu, D, Bai, Y.
登録日2011-05-11
公開日2011-10-26
最終更新日2014-10-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献PRL-1 protein promotes ERK1/2 and RhoA protein activation through a non-canonical interaction with the Src homology 3 domain of p115 Rho GTPase-activating protein.
J.Biol.Chem., 286, 2011
8SYP
DownloadVisualize
BU of 8syp by Molmil
Genomic CX3CR1 nucleosome
分子名称: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2023-05-25
公開日2023-11-01
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural mechanism of synergistic targeting of the CX3CR1 nucleosome by PU.1 and C/EBP alpha.
Nat.Struct.Mol.Biol., 31, 2024
5J6F
DownloadVisualize
BU of 5j6f by Molmil
Crystal structure of DAH7PS-CM complex from Geobacillus sp. with prephenate
分子名称: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, chorismate mutase-isozyme 3, MANGANESE (II) ION, ...
著者Nazmi, A.R, Othman, M, Lang, E.J.M, Bai, Y, Allison, T.M, Panjkar, S, Arcus, V.L, Parker, E.J.
登録日2016-04-04
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Interdomain Conformational Changes Provide Allosteric Regulation en Route to Chorismate.
J. Biol. Chem., 291, 2016
1YYX
DownloadVisualize
BU of 1yyx by Molmil
The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) at 2.8M urea
分子名称: Redesigned apo-cytochrome b562
著者Feng, H, Vu, N, Bai, Y, Berkeley Structural Genomics Center (BSGC)
登録日2005-02-25
公開日2005-08-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Detection and structure determination of an equilibrium unfolding intermediates of Rd-apocytochrome b562: native fold with non-native hydrophobic interactions
J.Mol.Biol., 343, 2004
1YZA
DownloadVisualize
BU of 1yza by Molmil
The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N-terminal helix unfolded
分子名称: Redesigned apo-cytochrome b562
著者Feng, H, Takei, T, Lipsitz, R, Tjandra, N, Bai, Y, Berkeley Structural Genomics Center (BSGC)
登録日2005-02-28
公開日2005-08-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Specific non-native hydrophobic interactions in a hidden folding intermediate: implication for protein folding
Biochemistry, 42, 2003
1YYJ
DownloadVisualize
BU of 1yyj by Molmil
The NMR solution structure of a redesigned apocytochrome b562:Rd-apocyt b562
分子名称: redesigned apocytochrome B562
著者Feng, H, Takei, J, Lipsitz, R, Tjandra, N, Bai, Y, Berkeley Structural Genomics Center (BSGC)
登録日2005-02-25
公開日2005-08-25
最終更新日2023-09-27
実験手法SOLUTION NMR
主引用文献Specific non-native hydrophobic interactions in a hidden folding intermediate: implications for protein folding
Biochemistry, 42, 2003
1YZC
DownloadVisualize
BU of 1yzc by Molmil
The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N- and a part of the C-terminal helices unfolded
分子名称: edesigned apo-cytochrome b562
著者Feng, H, Zhou, Z, Bai, Y, Berkeley Structural Genomics Center (BSGC)
登録日2005-02-28
公開日2006-03-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A protein folding pathway with multiple folding intermediates at atomic resolution
Proc.Natl.Acad.Sci.Usa, 102, 2005
2MZD
DownloadVisualize
BU of 2mzd by Molmil
Characterization of the p300 Taz2-p53 TAD2 Complex and Comparison with the p300 Taz2-p53 TAD1 Complex
分子名称: Cellular tumor antigen p53, Histone acetyltransferase p300
著者Miller Jenkins, L.M, Feng, H, Durell, S.R, Tagad, H.D, Mazur, S.J, Tropea, J.E, Bai, Y, Appella, E.
登録日2015-02-11
公開日2015-03-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Characterization of the p300 Taz2-p53 TAD2 Complex and Comparison with the p300 Taz2-p53 TAD1 Complex.
Biochemistry, 54, 2015
2RPI
DownloadVisualize
BU of 2rpi by Molmil
The NMR structure of the submillisecond folding intermediate of the Thermus thermophilus ribonuclease H
分子名称: Ribonuclease H
著者Zhou, Z, Feng, H, Bai, Y.
登録日2008-05-16
公開日2009-03-31
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The high-resolution NMR structure of the early folding intermediate of the Thermus thermophilus ribonuclease H
J.Mol.Biol., 384, 2008
8SPS
DownloadVisualize
BU of 8sps by Molmil
High resolution structure of ESRRB nucleosome bound OCT4 at site a and site b
分子名称: DNA (168-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2023-05-03
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
8SPU
DownloadVisualize
BU of 8spu by Molmil
Structure of ESRRB nucleosome bound OCT4 at site c
分子名称: DNA (168-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2023-05-03
公開日2023-06-28
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
5BX1
DownloadVisualize
BU of 5bx1 by Molmil
Crystal Structure of PRL-1 complex with compound analogy 3
分子名称: 3-(5,6-dimethyl-2H-isoindol-2-yl)-N'-[(E)-furan-2-ylmethylidene]benzohydrazide, Protein tyrosine phosphatase type IVA 1, SULFATE ION
著者Liu, S, Bai, Y, Zhang, Z.
登録日2015-06-08
公開日2016-12-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of PRL-1 complex with compound analogy 3
To Be Published
7K63
DownloadVisualize
BU of 7k63 by Molmil
Cryo-EM structure of a chromatosome containing chimeric linker histone gH1.10-ncH1.4
分子名称: DNA (197-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Zhou, B.-R, Bai, Y.
登録日2020-09-18
公開日2020-11-25
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms.
Mol.Cell, 81, 2021
7K61
DownloadVisualize
BU of 7k61 by Molmil
Cryo-EM structure of 197bp nucleosome aided by scFv
分子名称: DNA (197-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Zhou, B.-R, Bai, Y.
登録日2020-09-17
公開日2020-11-25
最終更新日2021-01-20
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms.
Mol.Cell, 81, 2021
7K5X
DownloadVisualize
BU of 7k5x by Molmil
Cryo-EM structure of a chromatosome containing human linker histone H1.0
分子名称: DNA (197-MER), Histone H1.0, Histone H2A type 1-B/E, ...
著者Zhou, B.-R, Bai, Y.
登録日2020-09-17
公開日2020-11-25
最終更新日2021-01-20
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms.
Mol.Cell, 81, 2021
7K5Y
DownloadVisualize
BU of 7k5y by Molmil
Cryo-EM structure of a chromatosome containing human linker histone H1.4
分子名称: DNA (197-MER), Histone H1.4, Histone H2A type 1-B/E, ...
著者Zhou, B.-R, Bai, Y.
登録日2020-09-17
公開日2020-11-25
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms.
Mol.Cell, 81, 2021
7K60
DownloadVisualize
BU of 7k60 by Molmil
Cryo-EM structure of a chromatosome containing human linker histone H1.10
分子名称: DNA (197-MER), Histone H1.10, Histone H2A type 1-B/E, ...
著者Zhou, B.-R, Bai, Y.
登録日2020-09-17
公開日2020-11-25
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms.
Mol.Cell, 81, 2021
3HNS
DownloadVisualize
BU of 3hns by Molmil
CS-35 Fab Complex with Oligoarabinofuranosyl Hexasaccharide
分子名称: CS-35 Fab Heavy Chain, CS-35 Fab Light Chain, beta-D-arabinofuranose-(1-2)-alpha-D-arabinofuranose-(1-3)-[beta-D-arabinofuranose-(1-2)-alpha-D-arabinofuranose-(1-5)]alpha-D-arabinofuranose-(1-5)-methyl alpha-D-arabinofuranoside
著者Murase, T, Zheng, R.B, Joe, M, Bai, Y, Marcus, S.L, Lowary, T.L, Ng, K.K.S.
登録日2009-06-01
公開日2009-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into antibody recognition of mycobacterial polysaccharides.
J.Mol.Biol., 392, 2009
7K59
DownloadVisualize
BU of 7k59 by Molmil
Structure of apo VCP hexamer generated from bacterially recombinant VCP/p97
分子名称: Transitional endoplasmic reticulum ATPase
著者Yu, G, Bai, Y, Li, K, Jiang, W, Zhang, Z.Y.
登録日2020-09-16
公開日2021-10-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-electron microscopy structures of VCP/p97 reveal a new mechanism of oligomerization regulation.
Iscience, 24, 2021
7K57
DownloadVisualize
BU of 7k57 by Molmil
Structure of apo VCP dodecamer generated from bacterially recombinant VCP/p97
分子名称: Transitional endoplasmic reticulum ATPase
著者Yu, G, Bai, Y, Li, K, Jiang, W, Zhang, Z.Y.
登録日2020-09-16
公開日2021-10-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-electron microscopy structures of VCP/p97 reveal a new mechanism of oligomerization regulation.
Iscience, 24, 2021
7K56
DownloadVisualize
BU of 7k56 by Molmil
Structure of VCP dodecamer purified from H1299 cells
分子名称: Transitional endoplasmic reticulum ATPase
著者Yu, G, Bai, Y, Li, K, Jiang, W, Zhang, Z.Y.
登録日2020-09-16
公開日2021-10-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-electron microscopy structures of VCP/p97 reveal a new mechanism of oligomerization regulation.
Iscience, 24, 2021
3HNV
DownloadVisualize
BU of 3hnv by Molmil
CS-35 Fab Complex with Oligoarabinofuranosyl Tetrasaccharide (branch part of Hexasaccharide)
分子名称: CS-35 Fab Heavy Chain, CS-35 Fab Light Chain, beta-D-arabinofuranose-(1-2)-alpha-D-arabinofuranose-(1-3)-alpha-D-arabinofuranose-(1-5)-methyl alpha-D-arabinofuranoside
著者Murase, T, Zheng, R.B, Joe, M, Bai, Y, Marcus, S.L, Lowary, T.L, Ng, K.K.S.
登録日2009-06-01
公開日2009-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into antibody recognition of mycobacterial polysaccharides.
J.Mol.Biol., 392, 2009
3HYH
DownloadVisualize
BU of 3hyh by Molmil
Crystal structure of the protein kinase domain of yeast AMP-activated protein kinase Snf1
分子名称: Carbon catabolite-derepressing protein kinase
著者Rudolph, M.J, Amodeo, G.A, Bai, Y, Tong, L.
登録日2009-06-22
公開日2009-06-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the protein kinase domain of yeast AMP-activated protein kinase Snf1
Biochem.Biophys.Res.Commun., 337, 2005
3HNT
DownloadVisualize
BU of 3hnt by Molmil
CS-35 Fab complex with a linear, terminal oligoarabinofuranosyl tetrasaccharide from lipoarabinomannan
分子名称: CS-35 Fab Heavy Chain, CS-35 Fab Light Chain, beta-D-arabinofuranose-(1-2)-alpha-D-arabinofuranose-(1-5)-alpha-D-arabinofuranose-(1-5)-methyl alpha-D-arabinofuranoside
著者Murase, T, Zheng, R.B, Joe, M, Bai, Y, Marcus, S.L, Lowary, T.L, Ng, K.K.S.
登録日2009-06-01
公開日2009-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into antibody recognition of mycobacterial polysaccharides.
J.Mol.Biol., 392, 2009
3T4B
DownloadVisualize
BU of 3t4b by Molmil
Crystal Structure of the HCV IRES pseudoknot domain
分子名称: HCV IRES pseudoknot domain plus crystallization module, NICKEL (II) ION
著者Berry, K.E, Waghray, S, Mortimer, S.A, Bai, Y, Doudna, J.A.
登録日2011-07-25
公開日2011-10-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献Crystal structure of the HCV IRES central domain reveals strategy for start-codon positioning.
Structure, 19, 2011

220472

件を2024-05-29に公開中

PDB statisticsPDBj update infoContact PDBjnumon