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PDB: 43 件

2RSX
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Solution structure of IseA, an inhibitor protein of DL-endopeptidases from Bacillus subtilis
分子名称: Uncharacterized protein yoeB
著者Arai, R, Li, H, Tochio, N, Fukui, S, Kobayashi, N, Kitaura, C, Watanabe, S, Kigawa, T, Sekiguchi, J.
登録日2012-08-09
公開日2012-10-31
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution Structure of IseA, an Inhibitor Protein of DL-Endopeptidases from Bacillus subtilis, Reveals a Novel Fold with a Characteristic Inhibitory Loop
J.Biol.Chem., 287, 2012
1WZ7
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Crystal structure of enhancer of rudimentary homologue (ERH)
分子名称: Enhancer of rudimentary homolog
著者Arai, R, Kukimoto-Niino, M, Uda-Tochio, H, Morita, S, Uchikubo-Kamo, T, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-26
公開日2005-05-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of an enhancer of rudimentary homolog (ERH) at 2.1 Angstroms resolution.
Protein Sci., 14, 2005
1X42
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Crystal structure of a haloacid dehalogenase family protein (PH0459) from Pyrococcus horikoshii OT3
分子名称: hypothetical protein PH0459
著者Arai, R, Kukimoto-Niino, M, Sugahara, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-12
公開日2005-11-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the probable haloacid dehalogenase PH0459 from Pyrococcus horikoshii OT3
Protein Sci., 15, 2006
3VJF
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Crystal structure of de novo 4-helix bundle protein WA20
分子名称: POTASSIUM ION, WA20
著者Arai, R, Kimura, A, Kobayashi, N, Matsuo, K, Sato, T, Wang, A.F, Platt, J.M, Bradley, L.H, Hecht, M.H.
登録日2011-10-18
公開日2012-03-28
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Domain-swapped dimeric structure of a stable and functional de novo four-helix bundle protein, WA20
J.Phys.Chem.B, 116, 2012
2CZK
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Crystal structure of human myo-inositol monophosphatase 2 (IMPA2) (trigonal form)
分子名称: Inositol monophosphatase 2
著者Arai, R, Ito, K, Hanawa-Suetsugu, K, Ohnishi, T, Ohba, H, Yoshikawa, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-13
公開日2006-07-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of human myo-inositol monophosphatase 2, the product of the putative susceptibility gene for bipolar disorder, schizophrenia, and febrile seizures
Proteins, 67, 2007
2CZI
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Crystal structure of human myo-inositol monophosphatase 2 (IMPA2) with calcium and phosphate ions
分子名称: CALCIUM ION, Inositol monophosphatase 2, PHOSPHATE ION
著者Arai, R, Ito, K, Ohnishi, T, Ohba, H, Yoshikawa, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-13
公開日2006-07-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of human myo-inositol monophosphatase 2, the product of the putative susceptibility gene for bipolar disorder, schizophrenia, and febrile seizures
Proteins, 67, 2007
2DDK
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Crystal structure of human myo-inositol monophosphatase 2 (IMPA2) (orthorhombic form)
分子名称: Inositol monophosphatase 2
著者Arai, R, Ito, K, Kamo-Uchikubo, T, Bessho, Y, Ohba, H, Ohnishi, T, Yoshikawa, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-01-30
公開日2007-02-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of human myo-inositol monophosphatase 2, the product of the putative susceptibility gene for bipolar disorder, schizophrenia, and febrile seizures
Proteins, 67, 2007
3A3U
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Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, L(+)-TARTARIC ACID, Menaquinone biosynthetic enzyme, ...
著者Arai, R, Nishino, A, Nagano, K, Uchikubo-Kamo, T, Katsura, K, Nishimoto, M, Toyama, M, Terada, T, Kuramitsu, S, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-06-20
公開日2009-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8.
J.Struct.Biol., 168, 2009
2CZ5
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Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3
分子名称: CITRIC ACID, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Arai, R, Ito, K, Kamo-Uchikubo, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-11
公開日2006-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3
To be Published
2CWE
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Crystal structure of hypothetical transcriptional regulator protein, PH1932 from Pyrococcus horikoshii OT3
分子名称: hypothetical transcription regulator protein, PH1932
著者Arai, R, Kishishita, S, Kukimoto-Niino, M, Wang, H, Sugawara, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-20
公開日2005-12-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of hypothetical transcriptional regulator protein, PH1932 from Pyrococcus horikoshii OT3
To be Published
2CZ4
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Crystal structure of a putative PII-like signaling protein (TTHA0516) from Thermus thermophilus HB8
分子名称: ACETATE ION, CHLORIDE ION, hypothetical protein TTHA0516
著者Arai, R, Fusatomi, E, Kukimoto-Niino, M, Kawaguchi, S, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-10
公開日2006-01-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Crystal structure of a putative PII-like signaling protein (TTHA0516) from Thermus thermophilus HB8
To be Published
2CZE
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Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 complexed with UMP
分子名称: CITRIC ACID, GLYCEROL, Orotidine 5'-phosphate decarboxylase, ...
著者Arai, R, Ito, K, Kishishita, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-13
公開日2006-01-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 complexed with UMP
To be Published
2CZL
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Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8 (Cys11 modified with beta-mercaptoethanol)
分子名称: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, L(+)-TARTARIC ACID, POTASSIUM ION, ...
著者Arai, R, Nishino, A, Nagano, K, Kamo-Uchikubo, T, Nishimoto, M, Toyama, M, Terada, T, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-13
公開日2006-01-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8.
J.Struct.Biol., 168, 2009
2CZD
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Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 at 1.6 A resolution
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Arai, R, Ito, K, Kamo-Uchikubo, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-13
公開日2006-01-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 at 1.6 A resolution
To be Published
7CYW
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Crystal structure of a flavonoid C-glucosyltrasferase from Fagopyrum esculentum (FeCGTa) complexed with BrUTP
分子名称: 5-bromouridine 5'-(tetrahydrogen triphosphate), ACETATE ION, UDP-glycosyltransferase 708C1
著者Koyanagi, Y, Taguchi, G, Arai, R.
登録日2020-09-04
公開日2020-09-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a flavonoid C-glucosyltrasferase from Fagopyrum esculentum
To be published
4YSH
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BU of 4ysh by Molmil
Crystal structure of glycine oxidase from Geobacillus kaustophilus
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, ...
著者Shiono, T, Nomura, T, Arai, R.
登録日2015-03-17
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of glycine oxidase from Geobacillus kaustophilus
to be published
6KST
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BU of 6kst by Molmil
Crystal structure of the catalytic domain of chitinase ChiL from Chitiniphilus shinanonensis (CsChiL)
分子名称: 1,2-ETHANEDIOL, 2-METHOXYETHANOL, CHLORIDE ION, ...
著者Ueda, M, Shimosaka, M, Arai, R.
登録日2019-08-26
公開日2020-08-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of a chitinase (CsChiL) from Chitiniphilus shinanonensis
To be published
6KOS
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Crystal structure of SUWA (Super WA20), a hyper-stable de novo protein with a dimeric bisecting topology
分子名称: SUWA (Super WA20)
著者Kimura, N, Arai, R.
登録日2019-08-13
公開日2020-01-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献HyperstableDe NovoProtein with a Dimeric Bisecting Topology.
Acs Synth Biol, 9, 2020
6KXN
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Crystal structure of W50A mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Ueda, M, Shimosaka, M, Arai, R.
登録日2019-09-12
公開日2020-09-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of CsChiL, a chitinase from Chitiniphilus shinanonensis
To be published
6KXL
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Crystal structure of the catalytic domain of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose
分子名称: 1,2-ETHANEDIOL, 2-METHOXYETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ueda, M, Shimosaka, M, Arai, R.
登録日2019-09-12
公開日2020-09-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal structure of CsChiL, a chitinase from Chitiniphilus shinanonensis
To be published
6KXM
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Crystal structure of D157N mutant of Chitiniphilus shinanonensis chitinase ChiL (CsChiL) complexed with N,N'-diacetylchitobiose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Family 18 chitinase
著者Ueda, M, Shimosaka, M, Arai, R.
登録日2019-09-12
公開日2020-09-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of CsChiL, a chitinase from Chitiniphilus shinanonensis
To be published
7XM1
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BU of 7xm1 by Molmil
Cryo-EM structure of mTIP60-Ba (metal-ion induced TIP60 (K67E) complex with barium ions
分子名称: BARIUM ION, TIP60 K67E mutant
著者Ohara, N, Kawakami, N, Arai, R, Adachi, N, Moriya, T, Kawasaki, M, Miyamoto, K.
登録日2022-04-24
公開日2023-01-04
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Reversible Assembly of an Artificial Protein Nanocage Using Alkaline Earth Metal Ions.
J.Am.Chem.Soc., 145, 2023
8H7E
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Crystal structure of a de novo enzyme, ferric enterobactin esterase Syn-F4 (K4T) at 2.0 angstrom resolution
分子名称: ACETATE ION, De novo ferric enterobactin esterase Syn-F4
著者Kurihara, K, Umezawa, K, Donnelly, A.E, Hecht, M.H, Arai, R.
登録日2022-10-19
公開日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and activity of a de novo enzyme, ferric enterobactin esterase Syn-F4.
Proc.Natl.Acad.Sci.USA, 120, 2023
8H7D
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Crystal structure of a de novo enzyme, ferric enterobactin esterase Syn-F4 (K4T)
分子名称: ACETATE ION, De novo ferric enterobactin esterase Syn-F4
著者Kurihara, K, Umezawa, K, Donnelly, A.E, Hecht, M.H, Arai, R.
登録日2022-10-19
公開日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure and activity of a de novo enzyme, ferric enterobactin esterase Syn-F4.
Proc.Natl.Acad.Sci.USA, 120, 2023
8H7C
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Crystal structure of a de novo enzyme, ferric enterobactin esterase Syn-F4 (K4T) - Pt derivative
分子名称: ACETATE ION, CHLORIDE ION, De novo ferric enterobactin esterase Syn-F4, ...
著者Kurihara, K, Umezawa, K, Donnelly, A.E, Hecht, M.H, Arai, R.
登録日2022-10-19
公開日2023-09-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure and activity of a de novo enzyme, ferric enterobactin esterase Syn-F4.
Proc.Natl.Acad.Sci.USA, 120, 2023

 

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