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PDB: 39 results

3WIV
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BU of 3wiv by Molmil
Crystal structure of Pro-S324A/D356A
Descriptor: CALCIUM ION, Tk-subtilisin
Authors:Uehara, R, Angkawidjaja, C, Koga, Y, Kanaya, S.
Deposit date:2013-09-25
Release date:2014-10-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Requirement of the insertion sequence for activation of Tk-subtilisin
To be Published
3WX9
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BU of 3wx9 by Molmil
Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PMP, GLA, 4AD, 2OG, GLU and KYA
Descriptor: (2E)-pent-2-enedioic acid, 2-OXOGLUTARIC ACID, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ...
Authors:Okada, K, Angkawidjaja, C, Koga, Y, Kanaya, S.
Deposit date:2014-07-28
Release date:2014-09-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PMP, GLA, 4AD, 2OG, GLU and KYA
To be Published
3VN5
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BU of 3vn5 by Molmil
Crystal structure of Aquifex aeolicus RNase H3
Descriptor: Ribonuclease HIII
Authors:Jongruja, N, You, D.J, Eiko, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2011-12-22
Release date:2012-12-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure and characterization of RNase H3 from Aquifex aeolicus
Febs J., 279, 2012
3X17
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BU of 3x17 by Molmil
Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase
Descriptor: CALCIUM ION, Endoglucanase, ZINC ION
Authors:Okano, H, Angkawidjaja, C, Kanaya, S.
Deposit date:2014-10-30
Release date:2015-01-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure, activity, and stability of metagenome-derived glycoside hydrolase family 9 endoglucanase with an N-terminal Ig-like domain.
Protein Sci., 24, 2015
3WX5
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BU of 3wx5 by Molmil
Crystal structure of metagenome-derived glycoside hydrolase family 12 endoglucanase
Descriptor: Cellulase
Authors:Okano, H, Angkawidjaja, C, Kanaya, S.
Deposit date:2014-07-17
Release date:2014-11-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and stability of metagenome-derived glycoside hydrolase family 12 cellulase (LC-CelA) a homolog of Cel12A from Rhodothermus marinus
FEBS Open Bio, 4, 2014
3WYD
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BU of 3wyd by Molmil
C-terminal esterase domain of LC-Est1
Descriptor: LC-Est1C
Authors:Okano, H, Hong, X, Angkawidjaja, C, Kanaya, S.
Deposit date:2014-08-26
Release date:2014-11-12
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural and biochemical characterization of a metagenome-derived esterase with a long N-terminal extension.
Protein Sci., 24, 2015
3WHI
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BU of 3whi by Molmil
Crystal structure of unautoprocessed form of IS1-inserted Pro-subtilisin E
Descriptor: CALCIUM ION, Subtilisin E
Authors:Uehara, R, Angkawidjaja, C, Koga, Y, Kanaya, S.
Deposit date:2013-08-26
Release date:2013-12-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Formation of the High-Affinity Calcium Binding Site in Pro-subtilisin E with the Insertion Sequence IS1 of Pro-Tk-subtilisin
Biochemistry, 52, 2013
3AFG
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BU of 3afg by Molmil
Crystal structure of ProN-Tk-SP from Thermococcus kodakaraensis
Descriptor: CALCIUM ION, Subtilisin-like serine protease
Authors:Foophow, T, Tanaka, S, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2010-03-01
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a subtilisin homologue, Tk-SP, from Thermococcus kodakaraensis: requirement of a C-terminal beta-jelly roll domain for hyperstability.
J.Mol.Biol., 400, 2010
3ATH
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BU of 3ath by Molmil
Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with four AKGs as substrates and allosteric effectors
Descriptor: 2-OXOGLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207
Authors:Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2011-01-05
Release date:2012-01-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine
To be Published
3AOW
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BU of 3aow by Molmil
Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with AKG
Descriptor: 2-OXOGLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207
Authors:Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2010-10-07
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine
To be Published
3AV7
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BU of 3av7 by Molmil
Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PMP, KYN as substrates and KYA as products
Descriptor: (2S)-2-amino-4-(2-aminophenyl)-4-oxobutanoic acid, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-hydroxyquinoline-2-carboxylic acid, ...
Authors:Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2011-02-23
Release date:2012-03-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural insight into kynurenic acid excretion mechanisms of kynurenine aminotransferase in the hyperthermophilic archaeon Pyrococcus horikoshii
To be Published
3B09
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BU of 3b09 by Molmil
Crystal structure of the N-domain of FKBP22 from Shewanella sp. SIB1
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Budiman, C, Angkawidjaja, C, Motoike, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2011-06-07
Release date:2012-04-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of N-domain of FKBP22 from Shewanella sp. SIB1: dimer dissociation by disruption of Val-Leu knot
Protein Sci., 20, 2011
3AOV
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BU of 3aov by Molmil
Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PLP
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207
Authors:Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2010-10-07
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine
To be Published
3AHP
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BU of 3ahp by Molmil
Crystal structure of stable protein, CutA1, from a psychrotrophic bacterium Shewanella sp. SIB1
Descriptor: CutA1
Authors:Tanaka, S, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2010-04-26
Release date:2011-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of stable protein CutA1 from psychrotrophic bacterium Shewanella sp. SIB1
J.SYNCHROTRON RADIAT., 18, 2011
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數據於2024-05-15公開中

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