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PDB: 15 results
8T2P
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BU of 8t2p by Molmil
5TU-t1 - heterodimeric triplet polymerase ribozyme
Descriptor: RNA (135-MER), RNA (152-MER)
Authors:McRae, E.K.S, Kristoffersen, E, Gallego, I, Hansen, K, Holliger, P, Andersen, E.S.
Deposit date:2023-06-06
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Cryo-EM structure and functional landscape of an RNA polymerase ribozyme.
Proc.Natl.Acad.Sci.USA, 121, 2024
7ZJ4
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BU of 7zj4 by Molmil
Ligand bound state of a brocolli-pepper aptamer FRET tile
Descriptor: 4-(3,5-difluoro-4-hydroxybenzyl)-1,2-dimethyl-1H-imidazol-5-ol, 4-[(~{Z})-1-cyano-2-[5-[2-hydroxyethyl(methyl)amino]thieno[3,2-b]thiophen-2-yl]ethenyl]benzenecarbonitrile, POTASSIUM ION, ...
Authors:McRae, E.K.S, Vallina, N.S, Hansen, B.K, Boussebayle, A, Andersen, E.S.
Deposit date:2022-04-08
Release date:2023-04-19
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.43 Å)
Cite:Structure determination of Pepper-Broccoli FRET pair by RNA origami scaffolding
To Be Published
7ZJ5
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BU of 7zj5 by Molmil
Unbound state of a brocolli-pepper aptamer FRET tile.
Descriptor: POTASSIUM ION, brocolli-pepper aptamer
Authors:McRae, E.K.S, Vallina, N.S, Hansen, B.K, Boussebayle, A, Andersen, E.S.
Deposit date:2022-04-08
Release date:2023-04-19
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.55 Å)
Cite:Structure determination of Pepper-Broccoli FRET pair by RNA origami scaffolding
To Be Published
9H86
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BU of 9h86 by Molmil
Small circular RNA dimer - Class 4
Descriptor: Circular RNA, Complementary strand
Authors:McRae, E.K, Kristoffersen, E.L, Holliger, P, Andersen, E.S.
Deposit date:2024-10-28
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (9.3 Å)
Cite:Roles of dimeric intermediates in RNA-catalyzed rolling circle synthesis
To Be Published
9H83
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BU of 9h83 by Molmil
Small circular RNA dimer - Class 2
Descriptor: Circular RNA, Complementary strand
Authors:McRae, E.K, Kristoffersen, E.L, Holliger, P, Andersen, E.S.
Deposit date:2024-10-28
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Roles of dimeric intermediates in RNA-catalyzed rolling circle synthesis
To Be Published
9H82
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BU of 9h82 by Molmil
Small circular RNA dimer - Class 1
Descriptor: RNA (36-MER), RNA (5'-R(P*AP*UP*CP*UP*UP*CP*UP*UP*CP*GP*AP*UP*UP*UP*CP*UP*UP*CP*CP*AP*UP*C)-3')
Authors:McRae, E.K, Kristoffersen, E.L, Holliger, P, Andersen, E.S.
Deposit date:2024-10-28
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (7.29 Å)
Cite:Roles of dimeric intermediates in RNA-catalyzed rolling circle synthesis
To Be Published
9H8A
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BU of 9h8a by Molmil
Small circular RNA dimer - Class 5
Descriptor: Circular RNA, Complementary strand
Authors:McRae, E.K, Kristoffersen, E.L, Holliger, P, Andersen, E.S.
Deposit date:2024-10-28
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (9.6 Å)
Cite:Roles of dimeric intermediates in RNA-catalyzed rolling circle synthesis
To Be Published
8TVZ
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BU of 8tvz by Molmil
RNA origami 3-helix tile Traptamer
Descriptor: RNA (363-MER)
Authors:McRae, E.K.S, Vallina, N.S, Andersen, E.S.
Deposit date:2023-08-18
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (5.94 Å)
Cite:An RNA origami robot that traps and releases a fluorescent aptamer.
Sci Adv, 10, 2024
7PTQ
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BU of 7ptq by Molmil
RNA origami 5-helix tile
Descriptor: Chains: C
Authors:McRae, E.K.S, Andersen, E.S.
Deposit date:2021-09-27
Release date:2022-10-05
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.08 Å)
Cite:Structure, folding and flexibility of co-transcriptional RNA origami.
Nat Nanotechnol, 18, 2023
7PTS
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BU of 7pts by Molmil
RNA origami 5-helix tile
Descriptor: 5HT-B
Authors:McRae, E.K.S, Andersen, E.S.
Deposit date:2021-09-27
Release date:2022-10-05
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.71 Å)
Cite:Structure, folding and flexibility of co-transcriptional RNA origami.
Nat Nanotechnol, 18, 2023
7PTL
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BU of 7ptl by Molmil
Mature conformer of a 6-helix bundle of RNA with clasp
Descriptor: Chains: B
Authors:McRae, E.K.S, Andersen, E.S.
Deposit date:2021-09-27
Release date:2022-10-05
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structure, folding and flexibility of co-transcriptional RNA origami.
Nat Nanotechnol, 18, 2023
7PTK
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BU of 7ptk by Molmil
Young conformer of a 6-helix bundle of RNA with clasp
Descriptor: RNA
Authors:McRae, E.K.S, Andersen, E.S.
Deposit date:2021-09-27
Release date:2022-10-05
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.18 Å)
Cite:Structure, folding and flexibility of co-transcriptional RNA origami.
Nat Nanotechnol, 18, 2023
7QDU
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BU of 7qdu by Molmil
Twist-corrected RNA origami 5-helix Tile A
Descriptor: Chains: Q
Authors:McRae, E.K.S, Andersen, E.S.
Deposit date:2021-11-30
Release date:2022-12-14
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (5.14 Å)
Cite:Structure, folding and flexibility of co-transcriptional RNA origami.
Nat Nanotechnol, 18, 2023
8BTZ
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BU of 8btz by Molmil
Single-stranded Paranemic Crossover RNA Triangle (PXT)
Descriptor: RNA Paranemic croosover triangle (PXT)
Authors:Sampedro, N, McRae, E.K.S, Andersen, E.S.
Deposit date:2022-11-30
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (5.39 Å)
Cite:An RNA Paranemic Crossover Triangle as A 3D Module for Cotranscriptional Nanoassembly.
Small, 19, 2023
8BU8
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BU of 8bu8 by Molmil
Double-motif Single-stranded Paranemic Crossover RNA Triangle (2PXT)
Descriptor: RNA (354-MER)
Authors:Sampedro, N, Andersen, E.S, McRae, E.K.S.
Deposit date:2022-11-30
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (6.56 Å)
Cite:An RNA Paranemic Crossover Triangle as A 3D Module for Cotranscriptional Nanoassembly.
Small, 19, 2023

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PDB entries from 2025-01-08

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