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PDB: 263 results

2Z3P
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BU of 2z3p by Molmil
complex structure of LF-transferase and leucine
Descriptor: D(-)-TARTARIC ACID, LEUCINE, Leucyl/phenylalanyl-tRNA-protein transferase
Authors:Watanabe, K, Toh, Y, Tomita, K.
Deposit date:2007-06-04
Release date:2007-10-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3O
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complex structure of LF-transferase and phenylalanine
Descriptor: D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, PHENYLALANINE
Authors:Watanabe, K, Toh, Y, Tomita, K.
Deposit date:2007-06-04
Release date:2007-10-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3N
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BU of 2z3n by Molmil
complex structure of LF-transferase and peptide B
Descriptor: D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, peptide (PHE)(ARG)(TYR)(LEU)(GLY)
Authors:Watanabe, K, Toh, Y, Tomita, K.
Deposit date:2007-06-04
Release date:2007-10-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
3WZJ
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CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH 4-(6-(cyclohexylamino)-8-(((tetrahydro-2H-pyran-4-yl)methyl)amino)imidazo[1,2-b]pyridazin-3-yl)-N-cyclopropylbenzamide
Descriptor: 4-{6-(cyclohexylamino)-8-[(tetrahydro-2H-pyran-4-ylmethyl)amino]imidazo[1,2-b]pyridazin-3-yl}-N-cyclopropylbenzamide, Dual specificity protein kinase TTK
Authors:Kusakabe, K, Ide, N, Daigo, Y, Itoh, T, Yamamoto, T, Kojima, E, Mitsuoka, Y, Tadano, G, Tagashira, S, Higashino, K, Okano, Y, Sato, Y, Inoue, M, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Kido, Y, Sakamoto, S, Ando, S, Maeda, M, Higaki, M, Yoshizawa, H, Mura, H, Nakamura, Y.
Deposit date:2014-09-29
Release date:2015-02-11
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Discovery of imidazo[1,2-b]pyridazine derivatives: selective and orally available Mps1 (TTK) kinase inhibitors exhibiting remarkable antiproliferative activity.
J.Med.Chem., 58, 2015
3WYY
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BU of 3wyy by Molmil
CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH (E)-3-(4-((6-(((3s,5s,7s)-adamantan-1-yl)amino)-4-amino-5-cyanopyridin-2-yl)amino)-2-(cyanomethoxy)phenyl)-N-(2-methoxyethyl)acrylamide
Descriptor: (2E)-3-[4-({4-amino-5-cyano-6-[(3s,5s,7s)-tricyclo[3.3.1.1~3,7~]dec-1-ylamino]pyridin-2-yl}amino)-2-(cyanomethoxy)phenyl]-N-(2-methoxyethyl)prop-2-enamide, Dual specificity protein kinase TTK
Authors:Kusakabe, K, Ide, N, Daigo, Y, Itoh, T, Yamamoto, T, Kojima, E, Mitsuoka, Y, Tadano, G, Tagashira, S, Higashino, K, Okano, Y, Sato, Y, Inoue, M, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Kido, Y, Sakamoto, S, Ando, S, Maeda, M, Higaki, M, Yoshizawa, H, Murai, H, Nakamura, Y.
Deposit date:2014-09-10
Release date:2015-04-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:A unique hinge binder of extremely selective aminopyridine-based Mps1 (TTK) kinase inhibitors with cellular activity.
Bioorg.Med.Chem., 23, 2015
3S96
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Crystal structure of 3B5H10
Descriptor: 3B5H10 FAB heavy chain, 3B5H10 FAB light chain
Authors:Weisgraber, K, Peters-Libeu, C, Rutenber, E, Newhouse, Y, Finkbeiner, S.
Deposit date:2011-05-31
Release date:2012-02-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Disease-associated polyglutamine stretches in monomeric huntingtin adopt a compact structure.
J.Mol.Biol., 421, 2012
2AF5
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BU of 2af5 by Molmil
2.5A X-ray Structure of Engineered OspA protein
Descriptor: Engineered Outer Surface Protein A (OspA) with the inserted two beta-hairpins
Authors:Makabe, K, Mcelheny, D, Tereshko, V, Hilyard, A, Koide, A, Koide, S.
Deposit date:2005-07-25
Release date:2006-08-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2G8C
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Atomic-resolution crystal structure of Borrelia burgdorferi OspA via surface entropy reduction
Descriptor: IMIDAZOLE, TETRAETHYLENE GLYCOL, outer surface protein A
Authors:Makabe, K, Tereshko, V, Koide, S.
Deposit date:2006-03-02
Release date:2006-08-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Atomic-resolution crystal structure of Borrelia burgdorferi outer surface protein A via surface engineering.
Protein Sci., 15, 2006
2HKD
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The crystal structure of engineered OSPA
Descriptor: Outer Surface Protein A, TETRAETHYLENE GLYCOL
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2006-07-03
Release date:2006-11-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I5V
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BU of 2i5v by Molmil
Crystal structure of OspA mutant
Descriptor: Outer surface protein A, TETRAETHYLENE GLYCOL
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2006-08-25
Release date:2007-12-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-Resolution Structure of a Self-Assembly-Competent Form of a Hydrophobic Peptide Captured in a Soluble β-Sheet Scaffold.
J.Mol.Biol., 378, 2008
2FKJ
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BU of 2fkj by Molmil
The crystal structure of engineered OspA
Descriptor: Outer Surface Protein A
Authors:Makabe, K, Terechko, V, Gawlak, G, Yan, S, Koide, S.
Deposit date:2006-01-04
Release date:2006-11-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FKG
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BU of 2fkg by Molmil
The Crystal Structure of Engineered OspA
Descriptor: Outer Surface Protein A
Authors:Makabe, K, Terechko, V, Gawlak, G, Yan, S, Koide, S.
Deposit date:2006-01-04
Release date:2006-11-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I5Z
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BU of 2i5z by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A, TETRAETHYLENE GLYCOL
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2006-08-26
Release date:2007-07-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Hydrophobic surface burial is the major stability determinant of a flat, single-layer beta-sheet.
J.Mol.Biol., 368, 2007
6J48
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Glycine mutation on single layer beta-sheet of OspAsm1
Descriptor: Outer surface protein A, TETRAETHYLENE GLYCOL
Authors:Makabe, K, Hori, Y.
Deposit date:2019-01-08
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.201 Å)
Cite:Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
6J47
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BU of 6j47 by Molmil
OspA variant with a short chameleon sequence from alpha B crystallin
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer surface protein A, TETRAETHYLENE GLYCOL
Authors:Makabe, K, Hori, Y.
Deposit date:2019-01-08
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
6J49
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BU of 6j49 by Molmil
Grafting VLADV sequence into OspAsm1
Descriptor: Outer surface protein A, TETRAETHYLENE GLYCOL
Authors:Makabe, K, Hori, Y.
Deposit date:2019-01-08
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
2OL7
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BU of 2ol7 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-01-18
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OL6
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BU of 2ol6 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-01-18
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OL8
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BU of 2ol8 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-01-18
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OY1
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BU of 2oy1 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-02-21
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OY5
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BU of 2oy5 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Biancalana, M, Yan, S, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015
2OY8
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BU of 2oy8 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, A, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
2OY7
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BU of 2oy7 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, A, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
1EQK
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BU of 1eqk by Molmil
SOLUTION STRUCTURE OF ORYZACYSTATIN-I, A CYSTEINE PROTEINASE INHIBITOR OF THE RICE, ORYZA SATIVA L. JAPONICA
Descriptor: ORYZACYSTATIN-I
Authors:Nagata, K, Kudo, N, Abe, K, Arai, S, Tanokura, M.
Deposit date:2000-04-05
Release date:2001-01-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of oryzacystatin-I, a cysteine proteinase inhibitor of the rice, Oryza sativa L. japonica.
Biochemistry, 39, 2000
6DMS
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BU of 6dms by Molmil
Endo-fucoidan hydrolase MfFcnA4_H294Q from glycoside hydrolase family 107
Descriptor: 1,2-ETHANEDIOL, Alpha-1,4-endofucoidanase, CALCIUM ION
Authors:Vickers, C, Abe, K, Salama-Alber, O, Boraston, A.B.
Deposit date:2018-06-05
Release date:2018-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
J. Biol. Chem., 293, 2018

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