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PDB: 89832 results

6WMK
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BU of 6wmk by Molmil
Crystal structure of beta sheet heterodimer LHD29
Descriptor: Beta sheet heterodimer LHD29 - Chain A, Beta sheet heterodimer LHD29 - Chain B
Authors:Bera, A.K, Sahtoe, D.D, Kang, A, Sankaran, B, Baker, D.
Deposit date:2020-04-21
Release date:2021-11-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Reconfigurable asymmetric protein assemblies through implicit negative design.
Science, 375, 2022
6HP7
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BU of 6hp7 by Molmil
ARBITRIUM PEPTIDE RECEPTOR FROM SPBETA PHAGE in complex with 43 mer DNA
Descriptor: DNA (43-MER), PHOSPHATE ION, SPBc2 prophage-derived uncharacterized protein YopK
Authors:Marina, A, Gallego del Sol, F.
Deposit date:2018-09-19
Release date:2019-02-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Deciphering the Molecular Mechanism Underpinning Phage Arbitrium Communication Systems.
Mol.Cell, 74, 2019
7Q65
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BU of 7q65 by Molmil
Cryo-em structure of the Nup98 fibril polymorph 2
Descriptor: Nuclear pore complex protein Nup98
Authors:Ibanez de Opakua, A, Geraets, J.A, Frieg, B, Dienemann, C, Savastano, A, Rankovic, M, Cima-Omori, M.-S, Schroeder, G.F, Zweckstetter, M.
Deposit date:2021-11-05
Release date:2022-10-12
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Molecular interactions of FG nucleoporin repeats at high resolution.
Nat.Chem., 14, 2022
5I1H
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BU of 5i1h by Molmil
CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV3-53/IGKV3-20
Descriptor: FAB HEAVY CHAIN, FAB LIGHT CHAIN, SULFATE ION
Authors:Teplyakov, A, Obmolova, G, Malia, T, Luo, J, Gilliland, G.
Deposit date:2016-02-05
Release date:2016-06-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.222 Å)
Cite:Structural diversity in a human antibody germline library.
Mabs, 8, 2016
1D89
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BU of 1d89 by Molmil
A DNA DODECAMER CONTAINING AN ADENINE TRACT CRYSTALLIZES IN A UNIQUE LATTICE AND EXHIBITS A NEW BEND
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*AP*AP*AP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*TP*TP*TP*TP*TP*CP*GP*CP*G)-3')
Authors:DiGabriele, A.D, Steitz, T.A.
Deposit date:1992-07-17
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A DNA dodecamer containing an adenine tract crystallizes in a unique lattice and exhibits a new bend.
J.Mol.Biol., 231, 1993
7U1P
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BU of 7u1p by Molmil
RFC:PCNA bound to DNA with a ssDNA gap of five nucleotides
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA - Primer, DNA - Template, ...
Authors:Liu, X, Gaubitz, C, Pajak, J, Kelch, B.A.
Deposit date:2022-02-21
Release date:2022-07-06
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A second DNA binding site on RFC facilitates clamp loading at gapped or nicked DNA.
Elife, 11, 2022
4MAA
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BU of 4maa by Molmil
The Crystal Structure of Amino Acid ABC Transporter Substrate-binding Protein from Pseudomonas fluorescens Pf-5
Descriptor: CHLORIDE ION, GLYCEROL, Putative branched-chain amino acid ABC transporter, ...
Authors:Wu, R, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-08-15
Release date:2013-12-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of Amino Acid ABC Transporter Substrate-binding Protein from Pseudomonas fluorescens Pf-5
To be Published
8D10
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BU of 8d10 by Molmil
Crystal Structure of EcDsbA in a complex with (1-methyl-1H-pyrazol-5-yl)methanamine
Descriptor: 1-(1-methyl-1H-pyrazol-5-yl)methanamine, COPPER (II) ION, Thiol:disulfide interchange protein DsbA
Authors:Whitehouse, R.L, Ilyichova, O.V, Taylor, A.J.
Deposit date:2022-05-26
Release date:2022-12-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fragment screening libraries for the identification of protein hot spots and their minimal binding pharmacophores.
Rsc Med Chem, 14, 2023
7QD8
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BU of 7qd8 by Molmil
Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in apo state
Descriptor: Transposase for transposon Tn4430
Authors:Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G.
Deposit date:2021-11-26
Release date:2022-10-26
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insight into Tn3 family transposition mechanism.
Nat Commun, 13, 2022
8PJI
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BU of 8pji by Molmil
MLLT1 in complex with compound 10a
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, Protein ENL, ...
Authors:Raux, B, Diaz-Saez, L, Huber, K.V.M, Fedorov, O, Owen, D.R, Londregan, A.T, Bountra, C, Edwards, A, Arrowsmith, C.
Deposit date:2023-06-23
Release date:2023-11-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of PFI-6, a small-molecule chemical probe for the YEATS domain of MLLT1 and MLLT3.
Bioorg.Med.Chem.Lett., 98, 2023
7Q67
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BU of 7q67 by Molmil
Cryo-em structure of the Nup98 fibril polymorph 4
Descriptor: Nuclear pore complex protein Nup98
Authors:Ibanez de Opakua, A, Geraets, J.A, Frieg, B, Dienemann, C, Savastano, A, Rankovic, M, Cima-Omori, M.-S, Schroeder, G.F, Zweckstetter, M.
Deposit date:2021-11-05
Release date:2022-10-12
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Molecular interactions of FG nucleoporin repeats at high resolution.
Nat.Chem., 14, 2022
8DDB
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BU of 8ddb by Molmil
The N-terminal domain of PA endonuclease from the influenza H1N1 viral polymerase in complex with 4-(benzyloxy)-6-bromo-3-hydroxypicolinic acid
Descriptor: 6-bromo-3-hydroxy-4-oxo-1,4-dihydropyridine-2-carboxylic acid, ACETATE ION, MANGANESE (II) ION, ...
Authors:Kohlbrand, A.J, Stokes, R.W, Karges, J, Seo, H, Sankaran, B, Cohen, S.M.
Deposit date:2022-06-17
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Carboxylic Acid Isostere Derivatives of Hydroxypyridinones as Core Scaffolds for Influenza Endonuclease Inhibitors.
Acs Med.Chem.Lett., 14, 2023
3NUV
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BU of 3nuv by Molmil
Crystal structure of ketosteroid isomerase D38ND99N from Pseudomonas testosteroni (tKSI) with 4-Androstene-3,17-dione Bound
Descriptor: 4-ANDROSTENE-3-17-DIONE, SULFATE ION, Steroid Delta-isomerase
Authors:Gonzalez, A, Tsai, Y, Schwans, J, Sunden, F, Herschlag, D.
Deposit date:2010-07-07
Release date:2011-11-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal Structure of Ketosteroid Isomerase D38ND99N from Pseudomonas testosteroni (tKSI) with 4-Androstene-3,17-dione Bound
TO BE PUBLISHED
6WXQ
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BU of 6wxq by Molmil
Crystal structure of CRISPR-associated transcription factor Csa3 complexed with cA4
Descriptor: CRISPR-associated transcription factor Csa3 (Type I-A), GLYCEROL, cyclic tetraadenylate
Authors:Xia, P, Dutta, A, Parashar, V.
Deposit date:2020-05-11
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis of cyclic oligoadenylate binding to the transcription factor Csa3 outlines cross talk between type III and type I CRISPR systems.
J.Biol.Chem., 298, 2022
6O6O
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BU of 6o6o by Molmil
Structure of the regulator FasR from Mycobacterium tuberculosis
Descriptor: MYRISTIC ACID, TetR family transcriptional regulator
Authors:Larrieux, N, Trajtenberg, F, Lara, J, Gramajo, H, Buschiazzo, A.
Deposit date:2019-03-07
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Mycobacterium tuberculosis FasR senses long fatty acyl-CoA through a tunnel and a hydrophobic transmission spine.
Nat Commun, 11, 2020
5I18
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BU of 5i18 by Molmil
CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV1-69/IGKV4-1
Descriptor: FAB HEAVY CHAIN, FAB LIGHT CHAIN, GLYCEROL
Authors:Teplyakov, A, Obmolova, G, Malia, T, Luo, J, Gilliland, G.
Deposit date:2016-02-05
Release date:2016-02-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural diversity in a human antibody germline library.
Mabs, 8, 2016
4LOA
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BU of 4loa by Molmil
X-ray structure of the de-novo design amidase at the resolution 1.8A, Northeast Structural Genomics Consortium (NESG) Target OR398
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, De-novo design amidase
Authors:Kuzin, A, Lew, S, Vorobiev, S.M, Seetharaman, J, Sahdev, S, Xiao, R, Maglaqui, M, Kogan, S, Khersonsky, O, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-07-12
Release date:2013-08-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.819 Å)
Cite:Northeast Structural Genomics Consortium Target OR398
To be Published
5I1K
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BU of 5i1k by Molmil
CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV5-51/IGKV3-20
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, FAB HEAVY CHAIN, FAB LIGHT CHAIN, ...
Authors:Teplyakov, A, Obmolova, G, Malia, T, Luo, J, Gilliland, G.
Deposit date:2016-02-05
Release date:2016-06-08
Last modified:2016-08-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural diversity in a human antibody germline library.
Mabs, 8, 2016
4XKD
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BU of 4xkd by Molmil
Crystal structure of hemagglutinin from Taiwan (2013) H6N1 influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain
Authors:Tzarum, N, Zhu, X, Wilson, I.A.
Deposit date:2015-01-11
Release date:2015-04-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.482 Å)
Cite:Structure and Receptor Binding of the Hemagglutinin from a Human H6N1 Influenza Virus.
Cell Host Microbe, 17, 2015
3NR0
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BU of 3nr0 by Molmil
Optimization of the in silico designed Kemp eliminase KE70 by computational design and directed evolution R6 6/10A
Descriptor: deoxyribose phosphate aldolase
Authors:Khersonsky, O, Rothlisberge, D, Wollacott, A.M, Dym, O, Baker, D, Tawfik, D.S, Israel Structural Proteomics Center (ISPC)
Deposit date:2010-06-30
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Optimization of the in-silico-designed kemp eliminase KE70 by computational design and directed evolution
J.Mol.Biol., 407, 2011
4XKT
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BU of 4xkt by Molmil
E coli BFR variant Y149F
Descriptor: Bacterioferritin, SULFATE ION
Authors:Bradley, J.M, Hemmings, A.M, Le Brun, N.E.
Deposit date:2015-01-12
Release date:2015-12-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Three Aromatic Residues are Required for Electron Transfer during Iron Mineralization in Bacterioferritin.
Angew.Chem.Int.Ed.Engl., 54, 2015
7TVL
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BU of 7tvl by Molmil
Viral AMG chitosanase V-Csn, apo structure
Descriptor: GLYCEROL, SULFATE ION, Viral chitosanase V-Csn
Authors:Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K.
Deposit date:2022-02-05
Release date:2022-10-05
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (0.89 Å)
Cite:Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.
Nat Commun, 13, 2022
7TVN
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BU of 7tvn by Molmil
Viral AMG chitosanase V-Csn, D148N mutant
Descriptor: GLYCEROL, SULFATE ION, Viral chitosanase V-Csn D148N mutant
Authors:Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K.
Deposit date:2022-02-05
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.
Nat Commun, 13, 2022
8D11
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BU of 8d11 by Molmil
Crystal Structure of EcDsbA in a complex with 1-methyl-1H-pyrazol-5-amine
Descriptor: 1-methyl-1H-pyrazol-5-amine, COPPER (II) ION, Thiol:disulfide interchange protein DsbA
Authors:Whitehouse, R.L, Ilyichova, O.V, Taylor, A.J.
Deposit date:2022-05-26
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Fragment screening libraries for the identification of protein hot spots and their minimal binding pharmacophores.
Rsc Med Chem, 14, 2023
7TVO
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BU of 7tvo by Molmil
Viral AMG chitosanase V-Csn, E157Q mutant
Descriptor: GLYCEROL, SULFATE ION, Viral chitosanase V-Csn E157Q mutant
Authors:Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K.
Deposit date:2022-02-05
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.
Nat Commun, 13, 2022

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