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PDB: 88675 件

5MDM
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Structural intermediates in the fusion associated transition of vesiculovirus glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Baquero, E, Albertini, A.A, Gaudin, Y, Bressanelli, S.
登録日2016-11-11
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.998 Å)
主引用文献Structural intermediates in the fusion-associated transition of vesiculovirus glycoprotein.
EMBO J., 36, 2017
7O1R
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BU of 7o1r by Molmil
Unspecific peroxygenase from Hypoxylon sp. EC38 in complex with imidazole
分子名称: 1,4-BUTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Rotilio, L, Mattevi, A.
登録日2021-03-30
公開日2021-09-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural and biochemical studies enlighten the unspecific peroxygenase from Hypoxylon sp. EC38 as an efficient oxidative biocatalyst.
Acs Catalysis, 11, 2021
8CWV
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Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with a cross-neutralizing nanobody 2-31 and a human antibody CC12.1 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CC12.1 Fab heavy chain, CC12.1 Fab light chain, ...
著者Liu, H, Wilson, I.A.
登録日2022-05-19
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Superimmunity by pan-sarbecovirus nanobodies.
Cell Rep, 39, 2022
6ZPI
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Microtubule complexed with Kif15 motor domain. Symmetrised asymmetric unit
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein KIF15, ...
著者Atherton, J, Hummel, J.J.A, Olieric, N, Locke, J, Pena, A, Rosenfeld, S.S, Steinmetz, M.O, Hoogenraad, C.C, Moores, C.A.
登録日2020-07-08
公開日2020-12-30
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献The mechanism of kinesin inhibition by kinesin-binding protein.
Elife, 9, 2020
6FOP
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Glycoside hydrolase family 81 from Clostridium thermocellum (CtLam81A), Mutant E515A
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Correia, M.A.S.C, Carvalho, A.L.
登録日2018-02-08
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Novel insights into the degradation of beta-1,3-glucans by the cellulosome of Clostridium thermocellum revealed by structure and function studies of a family 81 glycoside hydrolase.
Int.J.Biol.Macromol., 117, 2018
8D27
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Arginase Domain of Ornithine Decarboxylase/Arginase from Fusobacterium nucleatum
分子名称: Arginase
著者Chan, A.C, Kolesnikov, M, Murphy, M.E.
登録日2022-05-27
公開日2022-07-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Sequence Divergence in the Arginase Domain of Ornithine Decarboxylase/Arginase in Fusobacteriacea Leads to Loss of Function in Oral Associated Species.
Biochemistry, 61, 2022
6PPC
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BU of 6ppc by Molmil
Solution structure of conotoxin MiXXVIIA
分子名称: Conopeptide phi-MiXXVIIA
著者Daly, N.L, Dekan, Z, Jin, A.H, Alewood, P.F.
登録日2019-07-06
公開日2019-08-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Conotoxin phi-MiXXVIIA from the Superfamily G2 Employs a Novel Cysteine Framework that Mimics Granulin and Displays Anti-Apoptotic Activity.
Angew. Chem. Int. Ed. Engl., 56, 2017
6VLF
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Crystal structure of mouse alpha 1,6-fucosyltransferase, FUT8 in its Apo-form
分子名称: 1,2-ETHANEDIOL, Alpha-(1,6)-fucosyltransferase, SULFATE ION
著者Jarva, M.A, Dramicanin, M, Lingford, J.P, Mao, R, John, A, Goddard-Borger, E.
登録日2020-01-23
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of substrate recognition and catalysis by fucosyltransferase 8.
J.Biol.Chem., 295, 2020
5MI8
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Structure of the phosphomimetic mutant of EF-Tu T383E
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, BETA-MERCAPTOETHANOL, ...
著者Talavera, A, Hendrix, J, Versees, W, De Gieter, S, Castro-Roa, D, Jurenas, D, Van Nerom, K, Vandenberk, N, Barth, A, De Greve, H, Hofkens, J, Zenkin, N, Loris, R, Garcia-Pino, A.
登録日2016-11-27
公開日2017-12-20
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.
Sci Adv, 4, 2018
6NTL
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Crystal Structure of Recombinant Human Acetylcholinesterase Inhibited by A-234
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, ...
著者Bester, S.M, Guelta, M.A, Height, J.J, Pegan, S.D.
登録日2019-01-29
公開日2020-07-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Insights into inhibition of human acetylcholinesterase by Novichok, A-series Nerve Agents
To Be Published
6NBY
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BU of 6nby by Molmil
T.elongatus NDH (composite model)
分子名称: IRON/SULFUR CLUSTER, NAD(P)H-quinone oxidoreductase chain 4 1, NAD(P)H-quinone oxidoreductase subunit 1, ...
著者Laughlin, T.G, Bayne, A, Trempe, J.-F, Savage, D.F, Davies, K.M.
登録日2018-12-10
公開日2019-02-27
最終更新日2020-04-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the complex I-like molecule NDH of oxygenic photosynthesis.
Nature, 566, 2019
8DKU
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BU of 8dku by Molmil
CryoEM structure of the A. aeolicus WzmWzt transporter bound to the native O antigen
分子名称: 6-deoxy-3-O-methyl-alpha-D-mannopyranose-(1-3)-beta-D-rhamnopyranose-(1-2)-alpha-D-rhamnopyranose, ABC transporter, Transport permease protein
著者Spellmon, N, Muszynski, A, Vlach, J, Zimmer, J.
登録日2022-07-06
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Molecular basis for polysaccharide recognition and modulated ATP hydrolysis by the O antigen ABC transporter.
Nat Commun, 13, 2022
8U5P
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BU of 8u5p by Molmil
Structure of Mango II aptamer bound to T01-6A-B
分子名称: 3-[2,16-dioxo-20-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-6,9,12-trioxa-3,15-diazaicosan-1-yl]-2-{(E)-[6-(4-methoxyphenyl)-1-methylquinolin-4(1H)-ylidene]methyl}-1,3-benzothiazol-3-ium, Mango II, POTASSIUM ION
著者Passalacqua, L.F.M, Ferre-D'Amare, A.R.
登録日2023-09-12
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of Mango II aptamer bound to T01-6A-B
To Be Published
8D3C
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BU of 8d3c by Molmil
VWF tubule derived from monomeric D1-A1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, von Willebrand factor
著者Anderson, J.R, Li, J, Springer, T.A, Brown, A.
登録日2022-06-01
公開日2022-07-06
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of VWF tubules before and after concatemerization reveal a mechanism of disulfide bond exchange.
Blood, 140, 2022
7Q0X
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BU of 7q0x by Molmil
Bovine Trypsin co-crystallized with V(IV)OSO4 and pic
分子名称: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
著者Santos, M.F.A, Fernandes, A.C.P, Correia, I, Sciortino, G, Garribba, E, Santos-Silva, T, Pessoa, J.C.
登録日2021-10-16
公開日2022-05-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Binding of V IV O 2+ , V IV OL, V IV OL 2 and V V O 2 L Moieties to Proteins: X-ray/Theoretical Characterization and Biological Implications.
Chemistry, 28, 2022
7Q0U
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Lysozyme soaked with V(IV)OSO4 and bipy
分子名称: 2,2'-bipyridine, ACETATE ION, CHLORIDE ION, ...
著者Santos, M.F.A, Fernandes, A.C.P, Correia, I, Sciortino, G, Garribba, E, Santos-Silva, T, Pessoa, J.C.
登録日2021-10-16
公開日2022-05-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Binding of V IV O 2+ , V IV OL, V IV OL 2 and V V O 2 L Moieties to Proteins: X-ray/Theoretical Characterization and Biological Implications.
Chemistry, 28, 2022
7Q0V
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Lysozyme soaked with V(IV)OSO4 and phen
分子名称: 1,10-PHENANTHROLINE, ACETATE ION, CHLORIDE ION, ...
著者Santos, M.F.A, Fernandes, A.C.P, Correia, I, Sciortino, G, Garribba, E, Santos-Silva, T, Pessoa, J.C.
登録日2021-10-16
公開日2022-05-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Binding of V IV O 2+ , V IV OL, V IV OL 2 and V V O 2 L Moieties to Proteins: X-ray/Theoretical Characterization and Biological Implications.
Chemistry, 28, 2022
7Q0W
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Bovine Trypsin co-crystallized with V(IV)OSO4 and phen
分子名称: 1,10-PHENANTHROLINE, CALCIUM ION, Cationic trypsin, ...
著者Santos, M.F.A, Fernandes, A.C.P, Correia, I, Sciortino, G, Garribba, E, Santos-Silva, T, Pessoa, J.C.
登録日2021-10-16
公開日2022-05-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Binding of V IV O 2+ , V IV OL, V IV OL 2 and V V O 2 L Moieties to Proteins: X-ray/Theoretical Characterization and Biological Implications.
Chemistry, 28, 2022
8U5T
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BU of 8u5t by Molmil
Structure of Mango II variant aptamer bound to T01-6A-B
分子名称: 3-{2,16-dioxo-20-[(3aS,4R,6aS)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-2-{(E)-[6-(4-methoxyphenyl)-1-methylquinolin-4(1H)-ylidene]methyl}-1,3-benzothiazol-3-ium, Mango II variant, POTASSIUM ION, ...
著者Passalacqua, L.F.M, Ferre-D'Amare, A.R.
登録日2023-09-12
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Mango II variant aptamer bound to T01-6A-B
To Be Published
6VP2
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Artificial Metalloproteins with Dinuclear Iron Centers
分子名称: ACETATE ION, AZIDE ION, Streptavidin, ...
著者Miller, K.R, Follmer, A.H, Jasniewski, A.J, Sabuncu, S, Biswas, S, Albert, T, Hendrich, M.P, Moenne-Loccoz, P, Borovik, A.S.
登録日2020-02-01
公開日2021-02-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Artificial Metalloproteins with Dinuclear Iron-Hydroxido Centers.
J.Am.Chem.Soc., 143, 2021
6YAV
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BU of 6yav by Molmil
Structure of FeSII (Shethna) protein from Azotobacter vinelandii
分子名称: Dimeric (2Fe-2S) protein, FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, ...
著者Kabasakal, B.V, Kung, W.K.A, Cotton, C.A.R, Lieber, L, McFarlane, C.R, Murray, J.W.
登録日2020-03-13
公開日2021-03-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of FeSII (Shethna) protein from Azotobacter vinelandii
To Be Published
6PMH
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Structure of Epimerase Mth375 from the thermophilic pseudomurein-containing methanogen Methanothermobacter thermautotrophicus
分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
著者Carbone, V, Schofield, L.R, Sutherland-Smith, A.J, Ronimus, R.S.
登録日2019-07-01
公開日2020-07-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of a UDP-GALE 4-epimerase (Mth375) from the thermophilic pseudomurein-containing methanogen Methanothermobacter thermautotrophicus
To Be Published
8U60
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BU of 8u60 by Molmil
Structure of Mango II variant2 aptamer bound to T01-6A
分子名称: 2-[(~{E})-[6-(4-methoxyphenyl)-1-methyl-quinolin-4-ylidene]methyl]-3-methyl-1,3-benzothiazole, POTASSIUM ION, RNA Mango II variant 2 aptamer
著者Passalacqua, L.F.M, Ferre-D'Amare, A.R.
登録日2023-09-13
公開日2024-03-27
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of Mango II variant2 aptamer bound to T01-6A
To Be Published
8D1R
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BU of 8d1r by Molmil
Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis in complex with inhibitor SGT520
分子名称: 1-{3-[(4-chlorophenyl)methoxy]phenyl}methanamine, GLYCEROL, N-acetyltransferase Eis
著者Pang, A.H, Punetha, A, Garneau-Tsodikova, S, Tsodikov, O.V.
登録日2022-05-27
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Discovery of substituted benzyloxy-benzylamine inhibitors of acetyltransferase Eis and their anti-mycobacterial activity.
Eur.J.Med.Chem., 242, 2022
8D25
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Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis in complex with inhibitor SGT530
分子名称: 1-{2-[(3-chlorophenyl)methoxy]phenyl}-N-[(pyridin-4-yl)methyl]methanamine, GLYCEROL, N-acetyltransferase Eis
著者Pang, A.H, Punetha, A, Garneau-Tsodikova, S, Tsodikov, O.V.
登録日2022-05-27
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Discovery of substituted benzyloxy-benzylamine inhibitors of acetyltransferase Eis and their anti-mycobacterial activity.
Eur.J.Med.Chem., 242, 2022

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