Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1OMH
DownloadVisualize
BU of 1omh by Molmil
Conjugative Relaxase TrwC in complex with OriT Dna. Metal-free structure.
Descriptor: DNA OLIGONUCLEOTIDE, SULFATE ION, trwC protein
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
Deposit date:2003-02-25
Release date:2003-11-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC.
Nat.Struct.Biol., 10, 2003
2CDM
DownloadVisualize
BU of 2cdm by Molmil
The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site
Descriptor: 5'-D(*GP*CP*GP*CP*AP*CP*CP*GP*AP*AP *AP*GP*GP*TP*GP*CP*GP*TP*AP*TP*TP*GP*TP*CP*TP*AP*T)-3', SULFATE ION, TRWC
Authors:Boer, R, Russi, S, Guasch, A, Lucas, M, Blanco, A.G, Perez-Luque, R, Coll, M, de la Cruz, F.
Deposit date:2006-01-25
Release date:2006-07-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Unveiling the Molecular Mechanism of a Conjugative Relaxase: The Structure of Trwc Complexed with a 27-mer DNA Comprising the Recognition Hairpin and the Cleavage Site.
J.Mol.Biol., 358, 2006
1OSB
DownloadVisualize
BU of 1osb by Molmil
Conjugative Relaxase TrwC in complex with OriT Dna. Metal-free structure.
Descriptor: Dna oligonucleotide, SULFATE ION, TrwC protein
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
Deposit date:2003-03-19
Release date:2003-11-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC.
Nat.Struct.Biol., 10, 2003
1GL7
DownloadVisualize
BU of 1gl7 by Molmil
Plasmid coupling protein TrwB in complex with the non-hydrolisable ATP-analogue ADPNP.
Descriptor: CHLORIDE ION, CONJUGAL TRANSFER PROTEIN TRWB, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Gomis-Ruth, F.X, Moncalian, G, De La cruz, F, Coll, M.
Deposit date:2001-08-28
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
1GKI
DownloadVisualize
BU of 1gki by Molmil
Plasmid coupling protein TrwB in complex with ADP and Mg2+.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, CONJUGAL TRANSFER PROTEIN TRWB, ...
Authors:Gomis-Ruth, F.X, Moncalian, G, De La cruz, F, Coll, M.
Deposit date:2001-08-14
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
1GL6
DownloadVisualize
BU of 1gl6 by Molmil
Plasmid coupling protein TrwB in complex with the non-hydrolysable GTP analogue GDPNP
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ATPASE, CHLORIDE ION, ...
Authors:Gomis-Ruth, F.X, Moncalian, G, De La cruz, F, Coll, M.
Deposit date:2001-08-28
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
1ZM5
DownloadVisualize
BU of 1zm5 by Molmil
Conjugative Relaxase TRWC in complex with ORIT dna, cooper-bound structure
Descriptor: COPPER (II) ION, DNA (25-MER), SULFATE ION, ...
Authors:Boer, R, Russi, S, Guasch, A, Lucas, M, Blanco, A.G, Coll, M, de la Cruz, F.
Deposit date:2005-05-10
Release date:2006-04-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Unveiling the Molecular Mechanism of a Conjugative Relaxase: The Structure of TrwC Complexed with a 27-mer DNA Comprising the Recognition Hairpin and the Cleavage Site
J.Mol.Biol., 358, 2006
1E9R
DownloadVisualize
BU of 1e9r by Molmil
Bacterial conjugative coupling protein TrwBdeltaN70. Trigonal form in complex with sulphate.
Descriptor: CONJUGAL TRANSFER PROTEIN TRWB, SULFATE ION
Authors:Gomis-Rueth, F.X, Moncalian, G, Cabezon, E, de la Cruz, F, Coll, M.
Deposit date:2000-10-26
Release date:2001-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
1E9S
DownloadVisualize
BU of 1e9s by Molmil
Bacterial conjugative coupling protein TrwBdeltaN70. Unbound monoclinic form.
Descriptor: CONJUGAL TRANSFER PROTEIN TRWB
Authors:Gomis-Rueth, F.X, Moncalian, G, Cabezon, E, de la Cruz, F, Coll, M.
Deposit date:2000-10-26
Release date:2001-02-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
1QX0
DownloadVisualize
BU of 1qx0 by Molmil
CONJUGATIVE RELAXASE TRWC IN COMPLEX WITH ORIT DNA. METAL-BOUND STRUCTURE
Descriptor: DNA OLIGONUCLEOTIDE, SULFATE ION, ZINC ION, ...
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Prez-Luque, R, Gomis-Rth, F.X, de la Cruz, F, Coll, M.
Deposit date:2003-09-04
Release date:2003-11-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:RECOGNITION AND PROCESSING OF THE ORIGIN OF TRANSFER DNA BY CONJUGATIVE RELAXASE TRWC
Nat.Struct.Biol., 10, 2003
1S6M
DownloadVisualize
BU of 1s6m by Molmil
Conjugative Relaxase Trwc In Complex With Orit DNA. Metal-Bound Structure
Descriptor: DNA (25-MER), NICKEL (II) ION, TrwC
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
Deposit date:2004-01-26
Release date:2005-06-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Unveiling the molecular mechanism of a conjugative relaxase: The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site.
J.Mol.Biol., 358, 2006
4PCB
DownloadVisualize
BU of 4pcb by Molmil
Conjugative Relaxase TrwC in complex with mutant OriT Dna
Descriptor: DNA 5'-D(P*GP*CP*AP*CP*CP*GP*AP*AP*GP*GP*TP*GP*CP*GP*TP*AP*TP*TP*CP*TP*TP*GP - 3'), PHOSPHATE ION, TrwC
Authors:Moncalian, G, Carballeira, J.D, de la Cruz, F, Gonzalez-Perez, B.
Deposit date:2014-04-14
Release date:2014-09-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A high security double lock and key mechanism in HUH relaxases controls oriT-processing for plasmid conjugation.
Nucleic Acids Res., 42, 2014
7PC1
DownloadVisualize
BU of 7pc1 by Molmil
DNA binding domain of partition protein StbA of plasmid R388
Descriptor: StbA
Authors:Guynet, C, Moncalian, G.
Deposit date:2021-08-03
Release date:2022-08-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of the DNA Binding Domain of StbA, A Key Protein of A New Type of DNA Segregation System.
J.Mol.Biol., 434, 2022
7BCB
DownloadVisualize
BU of 7bcb by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to IR3 DNA
Descriptor: DNA (5'-D(*TP*AP*AP*TP*GP*TP*CP*AP*AP*AP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*TP*TP*TP*GP*AP*CP*AP*TP*TP*A)-3'), KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-19
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
7BBQ
DownloadVisualize
BU of 7bbq by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid. Apo form.
Descriptor: KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-18
Release date:2022-07-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
7BCA
DownloadVisualize
BU of 7bca by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to a direct-repeat DNA element
Descriptor: DNA (5'-D(*GP*TP*AP*TP*TP*GP*AP*CP*AP*CP*CP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*GP*GP*TP*GP*TP*CP*AP*AP*TP*AP*C)-3'), KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-18
Release date:2022-07-13
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
6SNA
DownloadVisualize
BU of 6sna by Molmil
Crystal structure of Antirestriction ArdC protein from R388 plasmid. Mn(II)-bound structure.
Descriptor: ArdC protein, MANGANESE (II) ION
Authors:Gonzalez-Montes, L, Moncalian, G.
Deposit date:2019-08-23
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range.
Plos Genet., 16, 2020
6I89
DownloadVisualize
BU of 6i89 by Molmil
Crystal structure of Antirestriction ArdC protein from R388 plasmid. Metal-free structure.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ArdC protein
Authors:Gonzalez-Montes, L, Moncalian, G.
Deposit date:2018-11-19
Release date:2020-03-18
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range.
Plos Genet., 16, 2020

234785

PDB entries from 2025-04-16

PDB statisticsPDBj update infoContact PDBjnumon