5YU0
 
 | | Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase | | Descriptor: | Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION | | Authors: | Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H. | | Deposit date: | 2017-11-20 | | Release date: | 2018-05-02 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (1.92 Å) | | Cite: | Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase.
Mol. Cells, 41, 2018
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5YU1
 | | Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase | | Descriptor: | (2S)-piperidine-2-carboxylic acid, Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... | | Authors: | Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H. | | Deposit date: | 2017-11-20 | | Release date: | 2018-05-02 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (1.923 Å) | | Cite: | Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase.
Mol. Cells, 41, 2018
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4N9H
 | | Crystal structure of Transcription regulation Protein CRP | | Descriptor: | Catabolite gene activator | | Authors: | Lee, B.J, Seok, S.H, Im, H, Yoon, H.J. | | Deposit date: | 2013-10-21 | | Release date: | 2014-07-09 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Structures of inactive CRP species reveal the atomic details of the allosteric transition that discriminates cyclic nucleotide second messengers.
Acta Crystallogr.,Sect.D, 70, 2014
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4OID
 | | Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa | | Descriptor: | Probable M18 family aminopeptidase 2 | | Authors: | Nguyen, D.D, Pandian, R, Kim, D.D, Ha, S.C, Yoon, H.J, Kim, K.S, Yun, K.H, Kim, J.H, Kim, K.K. | | Deposit date: | 2014-01-19 | | Release date: | 2014-04-02 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa
Biochem.Biophys.Res.Commun., 447, 2014
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4OIW
 | | Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa | | Descriptor: | Probable M18 family aminopeptidase 2, ZINC ION | | Authors: | Nguyen, D.D, Pandian, R, Kim, D.D, Ha, S.C, Yoon, H.J, Kim, K.S, Yun, K.H, Kim, J.H, Kim, K.K. | | Deposit date: | 2014-01-20 | | Release date: | 2014-04-02 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.44 Å) | | Cite: | Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa
Biochem.Biophys.Res.Commun., 447, 2014
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4Q9D
 | | X-ray structure of a putative thiamin diphosphate-dependent enzyme isolated from Mycobacterium smegmatis | | Descriptor: | Benzoylformate decarboxylase, FORMIC ACID, MAGNESIUM ION | | Authors: | Andrews, F.H, Horton, J.D, Yoon, H.J, Malik, A.M.K, Logsdon, M.G, Shin, D.H, Kneen, M.M, Suh, S.W, McLeish, M.J. | | Deposit date: | 2014-04-30 | | Release date: | 2015-04-29 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | The kinetic characterization and X-ray structure of a putative benzoylformate decarboxylase from M. smegmatis highlights the difficulties in the functional annotation of ThDP-dependent enzymes.
Biochim.Biophys.Acta, 1854, 2015
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6JN8
 | | Structure of H216A mutant open form peptidoglycan peptidase | | Descriptor: | Peptidase M23, SULFATE ION, ZINC ION | | Authors: | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | Deposit date: | 2019-03-13 | | Release date: | 2020-01-15 | | Last modified: | 2022-03-23 | | Method: | X-RAY DIFFRACTION (2.106 Å) | | Cite: | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JMZ
 | | Structure of H247A mutant open form peptidoglycan peptidase | | Descriptor: | Peptidase M23, ZINC ION | | Authors: | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | Deposit date: | 2019-03-13 | | Release date: | 2020-01-15 | | Last modified: | 2022-03-23 | | Method: | X-RAY DIFFRACTION (1.92 Å) | | Cite: | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JMX
 | | Structure of open form of peptidoglycan peptidase | | Descriptor: | D(-)-TARTARIC ACID, GLYCEROL, Peptidase M23, ... | | Authors: | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | Deposit date: | 2019-03-13 | | Release date: | 2020-01-15 | | Last modified: | 2022-03-23 | | Method: | X-RAY DIFFRACTION (1.859 Å) | | Cite: | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JN1
 | | Structure of H247A mutant peptidoglycan peptidase complex with penta peptide | | Descriptor: | C0O-DAL-DAL, Peptidase M23, ZINC ION | | Authors: | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | Deposit date: | 2019-03-13 | | Release date: | 2020-01-15 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2.382 Å) | | Cite: | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JN0
 | | Structure of H247A mutant peptidoglycan peptidase complex with tetra-tri peptide | | Descriptor: | C0O-DAL-API, Peptidase M23, ZINC ION | | Authors: | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | Deposit date: | 2019-03-13 | | Release date: | 2020-01-15 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.164 Å) | | Cite: | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JN7
 | | Structure of H216A mutant closed form peptidoglycan peptidase | | Descriptor: | D(-)-TARTARIC ACID, Peptidase M23, ZINC ION | | Authors: | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | Deposit date: | 2019-03-13 | | Release date: | 2020-01-15 | | Last modified: | 2022-03-23 | | Method: | X-RAY DIFFRACTION (2.04 Å) | | Cite: | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6JMY
 | | Structure of wild type closed form of peptidoglycan peptidase | | Descriptor: | CITRIC ACID, Peptidase M23, ZINC ION | | Authors: | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | Deposit date: | 2019-03-13 | | Release date: | 2020-01-15 | | Last modified: | 2022-03-23 | | Method: | X-RAY DIFFRACTION (1.661 Å) | | Cite: | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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6K3F
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6KHU
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6KV1
 | | Structure of wild type closed form of peptidoglycan peptidase ZN SAD | | Descriptor: | CITRIC ACID, Peptidase M23, ZINC ION | | Authors: | Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. | | Deposit date: | 2019-09-03 | | Release date: | 2020-01-15 | | Last modified: | 2022-03-23 | | Method: | X-RAY DIFFRACTION (1.722 Å) | | Cite: | Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
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1WW6
 | | Agrocybe cylindracea galectin complexed with lactose | | Descriptor: | beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, galectin | | Authors: | Ban, M, Yoon, H.J, Demirkan, E, Utsumi, S, Mikami, B, Yagi, F. | | Deposit date: | 2005-01-03 | | Release date: | 2005-08-23 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Structural Basis of a Fungal Galectin from Agrocybe cylindracea for Recognizing Sialoconjugate
J.Mol.Biol., 351, 2005
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1WW4
 | | Agrocybe cylindracea galectin complexed with NeuAca2-3lactose | | Descriptor: | N-acetyl-alpha-neuraminic acid-(2-3)-alpha-D-galactopyranose-(1-4)-alpha-D-glucopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, galectin | | Authors: | Ban, M, Yoon, H.J, Demirkan, E, Utsumi, S, Mikami, B, Yagi, F. | | Deposit date: | 2004-12-31 | | Release date: | 2005-08-23 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Structural Basis of a Fungal Galectin from Agrocybe cylindracea for Recognizing Sialoconjugate
J.Mol.Biol., 351, 2005
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1WW5
 | | Agrocybe cylindracea galectin complexed with 3'-sulfonyl lactose | | Descriptor: | 3-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, galectin | | Authors: | Ban, M, Yoon, H.J, Demirkan, E, Utsumi, S, Mikami, B, Yagi, F. | | Deposit date: | 2005-01-03 | | Release date: | 2005-08-23 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Structural Basis of a Fungal Galectin from Agrocybe cylindracea for Recognizing Sialoconjugate
J.Mol.Biol., 351, 2005
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1WW7
 | | Agrocybe cylindracea galectin (Ligand-free) | | Descriptor: | SULFATE ION, galectin | | Authors: | Ban, M, Yoon, H.J, Demirkan, E, Utsumi, S, Mikami, B, Yagi, F. | | Deposit date: | 2005-01-03 | | Release date: | 2005-08-23 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Structural Basis of a Fungal Galectin from Agrocybe cylindracea for Recognizing Sialoconjugate
J.Mol.Biol., 351, 2005
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1HV6
 | | CRYSTAL STRUCTURE OF ALGINATE LYASE A1-III COMPLEXED WITH TRISACCHARIDE PRODUCT. | | Descriptor: | 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid-(1-4)-alpha-D-glucopyranuronic acid, ALGINATE LYASE, SULFATE ION | | Authors: | Yoon, H.-J, Hashimoto, W, Miyake, O, Murata, K, Mikami, B. | | Deposit date: | 2001-01-08 | | Release date: | 2001-05-02 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Crystal structure of alginate lyase A1-III complexed with trisaccharide product at 2.0 A resolution.
J.Mol.Biol., 307, 2001
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1QAZ
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3UY5
 | | crystal structure of Eis from Mycobacterium tuberculosis | | Descriptor: | Enhanced intracellular survival protein | | Authors: | Kim, K.H, Suh, S.W. | | Deposit date: | 2011-12-05 | | Release date: | 2012-05-23 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Mycobacterium tuberculosis Eis protein initiates suppression of host immune responses by acetylation of DUSP16/MKP-7
Proc.Natl.Acad.Sci.USA, 2012
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2F5G
 | | Crystal structure of IS200 transposase | | Descriptor: | Transposase, putative | | Authors: | Lee, H.H, Yoon, J.Y, Kim, H.S, Kang, J.Y, Kim, K.H, Kim, D.J, Suh, S.W. | | Deposit date: | 2005-11-25 | | Release date: | 2005-12-13 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Crystal Structure of a Metal Ion-bound IS200 Transposase
J.Biol.Chem., 281, 2006
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2F4F
 | | Crystal structure of IS200 transposase | | Descriptor: | MANGANESE (II) ION, Transposase, putative | | Authors: | Lee, H.H, Yoon, J.Y, Kim, H.S, Kang, J.Y, Kim, K.H, Kim, D.J, Suh, S.W. | | Deposit date: | 2005-11-23 | | Release date: | 2005-12-13 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Crystal Structure of a Metal Ion-bound IS200 Transposase
J.Biol.Chem., 281, 2006
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