1OCC
| STRUCTURE OF BOVINE HEART CYTOCHROME C OXIDASE AT THE FULLY OXIDIZED STATE | Descriptor: | COPPER (II) ION, CYTOCHROME C OXIDASE, HEME-A, ... | Authors: | Tsukihara, T, Aoyama, H, Yamashita, E, Tomizaki, T, Yamaguchi, H, Shinzawa-Itoh, K, Nakashima, R, Yaono, R, Yoshikawa, S. | Deposit date: | 1996-04-18 | Release date: | 1996-12-07 | Last modified: | 2018-03-21 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A. Science, 272, 1996
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7ERU
| Crystal structure of L-histidine decarboxylase (C57S mutant) from Photobacterium phosphoreum | Descriptor: | Histidine decarboxylase | Authors: | Oda, Y, Nakata, K, Yamaguchi, H, Kashiwagi, T, Miyano, H, Mizukoshi, T. | Deposit date: | 2021-05-07 | Release date: | 2022-02-16 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.85 Å) | Cite: | Structural insights into the enhanced thermostability of cysteine substitution mutants of L-histidine decarboxylase from Photobacterium phosphoreum. J.Biochem., 171, 2022
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7ERV
| Crystal structure of L-histidine decarboxylase (C57S/C101V/C282V mutant) from Photobacterium phosphoreum | Descriptor: | Histidine decarboxylase, IMIDAZOLE | Authors: | Oda, Y, Nakata, K, Yamaguchi, H, Kashiwagi, T, Miyano, H, Mizukoshi, T. | Deposit date: | 2021-05-07 | Release date: | 2022-02-16 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structural insights into the enhanced thermostability of cysteine substitution mutants of L-histidine decarboxylase from Photobacterium phosphoreum. J.Biochem., 171, 2022
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1IUG
| The crystal structure of aspartate aminotransferase which belongs to subgroup IV from Thermus thermophilus | Descriptor: | PHOSPHATE ION, putative aspartate aminotransferase | Authors: | Katsura, Y, Shirouzu, M, Yamaguchi, H, Ishitani, R, Nureki, O, Kuramitsu, S, Hayashi, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-03-04 | Release date: | 2003-11-25 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of a putative aspartate aminotransferase belonging to subgroup IV. Proteins, 55, 2004
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1UI7
| Site-directed mutagenesis of His433 involved in binding of copper ion in Arthrobacter globiformis amine oxidase | Descriptor: | COPPER (II) ION, Phenylethylamine oxidase | Authors: | Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K. | Deposit date: | 2003-07-15 | Release date: | 2004-04-20 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor Biochemistry, 43, 2004
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1UI8
| Site-directed mutagenesis of His592 involved in binding of copper ion in Arthrobacter globiformis amine oxidase | Descriptor: | COPPER (II) ION, Phenylethylamine oxidase | Authors: | Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K. | Deposit date: | 2003-07-15 | Release date: | 2004-04-20 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor Biochemistry, 43, 2004
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1V3R
| Crystal structure of TT1020 from Thermus thermophilus HB8 | Descriptor: | Nitrogen regulatory protein P-II | Authors: | Wang, H, Sakai, H, Takemoto-Hori, C, Kaminishi, T, Yamaguchi, H, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2003-11-05 | Release date: | 2004-11-23 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Crystal structures of the signal transducing protein GlnK from Thermus thermophilus HB8. J.Struct.Biol., 149, 2005
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3AMO
| Time-resolved X-ray Crystal Structure Analysis of Enzymatic Reaction of Copper Amine Oxidase from Arthrobacter globiformis | Descriptor: | COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase, ... | Authors: | Kataoka, M, Oya, H, Tominaga, A, Otsu, M, Okajima, T, Tanizawa, K, Yamaguchi, H. | Deposit date: | 2010-08-20 | Release date: | 2011-11-23 | Last modified: | 2017-10-11 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Detection of the reaction intermediates catalyzed by a copper amine oxidase. J.SYNCHROTRON RADIAT., 18, 2011
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6LXV
| Cryo-EM structure of phosphoketolase from Bifidobacterium longum | Descriptor: | CALCIUM ION, Phosphoketolase, THIAMINE DIPHOSPHATE | Authors: | Nakata, K, Miyazaki, N, Yamaguchi, H, Hirose, M, Miyano, H, Mizukoshi, T, Kashiwagi, T, Iwasaki, K. | Deposit date: | 2020-02-12 | Release date: | 2021-02-17 | Last modified: | 2022-10-12 | Method: | ELECTRON MICROSCOPY (2.1 Å) | Cite: | High-resolution structure of phosphoketolase from Bifidobacterium longum determined by cryo-EM single-particle analysis. J.Struct.Biol., 214, 2022
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1UL1
| Crystal structure of the human FEN1-PCNA complex | Descriptor: | Flap endonuclease-1, MAGNESIUM ION, Proliferating cell nuclear antigen | Authors: | Sakurai, S, Kitano, K, Yamaguchi, H, Hamada, K, Okada, K, Fukuda, K, Uchida, M, Ohtsuka, E, Morioka, H, Hakoshima, T. | Deposit date: | 2003-09-05 | Release date: | 2005-03-01 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structural basis for recruitment of human flap endonuclease 1 to PCNA EMBO J., 24, 2005
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1WMN
| Crystal structure of topaquinone-containing amine oxidase activated by cobalt ion | Descriptor: | COBALT (II) ION, Phenylethylamine oxidase | Authors: | Okajima, T, Kishishita, S, Chiu, Y.C, Murakawa, T, Kim, M, Yamaguchi, H, Hirota, S, Kuroda, S, Tanizawa, K. | Deposit date: | 2004-07-13 | Release date: | 2005-08-02 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Reinvestigation of metal ion specificity for quinone cofactor biogenesis in bacterial copper amine oxidase Biochemistry, 44, 2005
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1WMO
| Crystal structure of topaquinone-containing amine oxidase activated by nickel ion | Descriptor: | NICKEL (II) ION, Phenylethylamine oxidase | Authors: | Okajima, T, Kishishita, S, Chiu, Y.C, Murakawa, T, Kim, M, Yamaguchi, H, Hirota, S, Kuroda, S, Tanizawa, K. | Deposit date: | 2004-07-13 | Release date: | 2005-08-02 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Reinvestigation of metal ion specificity for quinone cofactor biogenesis in bacterial copper amine oxidase Biochemistry, 44, 2005
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2CWV
| Product schiff-base intermediate of copper amine oxidase from arthrobacter globiformis | Descriptor: | COPPER (II) ION, Phenylethylamine oxidase | Authors: | Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K. | Deposit date: | 2005-06-26 | Release date: | 2006-05-02 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,) Biochemistry, 45, 2006
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2CWU
| Substrate schiff-base intermediate of copper amine oxidase from arthrobacter globiformis | Descriptor: | COPPER (II) ION, Phenylethylamine oxidase | Authors: | Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K. | Deposit date: | 2005-06-26 | Release date: | 2006-05-02 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,) Biochemistry, 45, 2006
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1WMP
| Crystal structure of amine oxidase complexed with cobalt ion | Descriptor: | COBALT (II) ION, Phenylethylamine oxidase | Authors: | Okajima, T, Kishishita, S, Chiu, Y.C, Murakawa, T, Kim, M, Yamaguchi, H, Hirota, S, Kuroda, S, Tanizawa, K. | Deposit date: | 2004-07-13 | Release date: | 2005-08-02 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Reinvestigation of metal ion specificity for quinone cofactor biogenesis in bacterial copper amine oxidase Biochemistry, 44, 2005
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2CWT
| Catalytic base deletion in copper amine oxidase from arthrobacter globiformis | Descriptor: | COPPER (II) ION, Phenylethylamine oxidase | Authors: | Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K. | Deposit date: | 2005-06-26 | Release date: | 2006-05-02 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (1.82 Å) | Cite: | Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,) Biochemistry, 45, 2006
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1IU7
| HOLO FORM OF COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS | Descriptor: | AMINE OXIDASE, COPPER (II) ION | Authors: | Kishishita, S, Okajima, T, Kim, M, Yamaguchi, H, Hirota, S, Suzuki, S, Kuroda, S, Tanizawa, K, Mure, M. | Deposit date: | 2002-02-28 | Release date: | 2003-02-04 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Role of Copper Ion in Bacterial Copper Amine Oxidase: Spectroscopic and Crystallographic Studies of Metal-Substituted Enzymes J.AM.CHEM.SOC., 125, 2003
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1IVW
| Crystal structure of copper amine oxidase from Arthrobacter globiformis: Late intermediate in topaquinone biogenesis | Descriptor: | COPPER (II) ION, amine oxidase | Authors: | Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H. | Deposit date: | 2002-03-29 | Release date: | 2002-08-07 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase. Nat.Struct.Biol., 9, 2002
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1IVX
| Crystal structure of copper amine oxidase from Arthrobacter globiformis: Holo form generated by biogenesis in crystal. | Descriptor: | COPPER (II) ION, amine oxidase | Authors: | Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H. | Deposit date: | 2002-03-29 | Release date: | 2002-08-07 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase. Nat.Struct.Biol., 9, 2002
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1IQX
| CRYSTAL STRUCTURE OF COBALT-SUBSTITUTED AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS | Descriptor: | CO(II)-SUBSTITUTED AMINE OXIDASE, COBALT (II) ION | Authors: | Kishishita, S, Okajima, T, Mure, M, Kim, M, Yamaguchi, H, Hirota, S, Suzuki, S, Kuroda, S, Tanizawa, K. | Deposit date: | 2001-08-27 | Release date: | 2003-02-04 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Role of Copper Ion in Bacterial Copper Amine Oxidase: Spectroscopic and Crystallographic Studies of Metal-Substituted Enzymes J.AM.CHEM.SOC., 125, 2003
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1IQY
| CRYSTAL STRUCTURE OF NICKEL-SUBSTITUTED AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS | Descriptor: | AMINE OXIDASE, NICKEL (II) ION | Authors: | Kishishita, S, Okajima, T, Mure, M, Kim, M, Yamaguchi, H, Hirota, S, Kuroda, S, Tanizawa, K. | Deposit date: | 2001-08-28 | Release date: | 2003-02-04 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Role of Copper Ion in Bacterial Copper Amine Oxidase: Spectroscopic and Crystallographic Studies of Metal-Substituted Enzymes J.AM.CHEM.SOC., 125, 2003
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1IVV
| Crystal structure of copper amine oxidase from Arthrobacter globiformis: Early intermediate in topaquinone biogenesis | Descriptor: | COPPER (II) ION, amine oxidase | Authors: | Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H. | Deposit date: | 2002-03-29 | Release date: | 2002-08-07 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase. Nat.Struct.Biol., 9, 2002
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1IVU
| Crystal structure of copper amine oxidase from Arthrobacter globiformis: Initial intermediate in topaquinone biogenesis | Descriptor: | COPPER (II) ION, amine oxidase | Authors: | Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H. | Deposit date: | 2002-03-29 | Release date: | 2002-08-07 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase. Nat.Struct.Biol., 9, 2002
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2ZYP
| X-ray structure of hen egg-white lysozyme with poly(allyl amine) | Descriptor: | CHLORIDE ION, Lysozyme C, SODIUM ION, ... | Authors: | Ito, L, Tomita, S, Yamaguchi, H, Shiraki, K. | Deposit date: | 2009-01-27 | Release date: | 2009-02-17 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.18 Å) | Cite: | X-ray structure of hen egg-white lysozyme with poly(allyl amine) to be published
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3A34
| Effect of Ariginine on lysozyme | Descriptor: | ACETATE ION, ARGININE, CHLORIDE ION, ... | Authors: | Ito, L, Shiraki, K, Matsuura, T, Yamaguchi, H. | Deposit date: | 2009-06-09 | Release date: | 2010-06-16 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Implication of Arg bindings on aromatic surfaces of lysozyme for additives that prevent protein aggregation TO BE PUBLISHED
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