Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8BGL
DownloadVisualize
BU of 8bgl by Molmil
Structure of the dimeric rsCherryRev1.4
Descriptor: 1,2-ETHANEDIOL, ALPHA-AMINOBUTYRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Bui, T.Y.H, Van Meervelt, L.
Deposit date:2022-10-28
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:An unusual disulfide-linked dimerization in the fluorescent protein rsCherryRev1.4.
Acta Crystallogr.,Sect.F, 79, 2023
1K2Z
DownloadVisualize
BU of 1k2z by Molmil
The Crystal Structure of d(GGCCAATTGG) Complexed with Distamycin.
Descriptor: 5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3', DISTAMYCIN A
Authors:Uytterhoeven, K, Van Meervelt, L.
Deposit date:2001-10-01
Release date:2002-08-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Two 1 : 1 binding modes for distamycin in the minor groove of d(GGCCAATTGG).
Eur.J.Biochem., 269, 2002
1VTH
DownloadVisualize
BU of 1vth by Molmil
DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGTACA) COMPLEXED WITH DAUNOMYCIN
Descriptor: DAUNOMYCIN, DNA (5'-D(*TP*GP*TP*AP*CP*A)-3')
Authors:Nunn, C.M, Van Meervelt, L, Zhang, S, Moore, M.H, Kennard, O.
Deposit date:1992-03-01
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DNA-Drug Interactions: The Crystal Structures of d(TGTACA) and d(TGATCA) Complexed with Daunomycin
J.Mol.Biol., 222, 1991
1JTL
DownloadVisualize
BU of 1jtl by Molmil
The crystal structure of d(GGCCAATTGG) Complexed with Distamycin
Descriptor: 5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3', DISTAMYCIN A
Authors:Uytterhoeven, K, Van Meervelt, L.
Deposit date:2001-08-21
Release date:2002-08-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Two 1 : 1 binding modes for distamycin in the minor groove of d(GGCCAATTGG).
Eur.J.Biochem., 269, 2002
1VTI
DownloadVisualize
BU of 1vti by Molmil
DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGATCA) COMPLEXED WITH DAUNOMYCIN
Descriptor: DAUNOMYCIN, DNA (5'-D(*TP*GP*TP*AP*CP*A)-3')
Authors:Nunn, C.M, Van Meervelt, L, Zhang, S, Moore, M.H, Kennard, O.
Deposit date:1992-03-01
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:DNA-Drug Interactions: The Crystal Structures of d(TGTACA) and d(TGATCA) Complexed with Daunomycin
J.Mol.Biol., 222, 1991
4EMQ
DownloadVisualize
BU of 4emq by Molmil
Crystal structure of a single mutant of Dronpa, the green-on-state PDM1-4
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Fluorescent protein Dronpa, ...
Authors:Ngan, N.B, Van Hecke, K, Van Meervelt, L.
Deposit date:2012-04-12
Release date:2012-11-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for the influence of a single mutation K145N on the oligomerization and photoswitching rate of Dronpa.
Acta Crystallogr.,Sect.D, 68, 2012
6QLC
DownloadVisualize
BU of 6qlc by Molmil
The ssDNA-binding RNA polymerase cofactor Drc from Pseudomonas phage LUZ7
Descriptor: PHOSPHATE ION, ssDNA binding RNA Polymerase cofactor
Authors:De Zitter, E, Boon, M, De Smet, J, Lavigne, R, Van Meervelt, L.
Deposit date:2019-01-31
Release date:2019-10-30
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:'Drc', a structurally novel ssDNA-binding transcription regulator of N4-related bacterial viruses.
Nucleic Acids Res., 48, 2020
8BQT
DownloadVisualize
BU of 8bqt by Molmil
Hen Egg-White Lysozyme (HEWL) complexed with two methyl-functionalised Anderson-Evans polyoxometalates
Descriptor: CHLORIDE ION, Lysozyme C, Mn-Mo(6)-O(24)-C(10) cluster
Authors:Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
Deposit date:2022-11-21
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
8BQR
DownloadVisualize
BU of 8bqr by Molmil
Hen Egg-White Lysozyme (HEWL) complexed with biotin-functionalised Anderson-Evans polyoxometalate
Descriptor: Anderson-Evans polyoxometalate (biotin-functionalised), CALCIUM ION, Lysozyme C
Authors:Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
Deposit date:2022-11-21
Release date:2023-03-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
8BQP
DownloadVisualize
BU of 8bqp by Molmil
Hen Egg-White Lysozyme (HEWL) complexed with methyl-functionalised Anderson-Evans polyoxometalate
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
Authors:Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
Deposit date:2022-11-21
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
8BQQ
DownloadVisualize
BU of 8bqq by Molmil
Hen Egg-White Lysozyme (HEWL) complexed with amine-functionalised Anderson-Evans polyoxometalate
Descriptor: CHLORIDE ION, Lysozyme C, Mn-Mo(6)-N(2)-O(24)-C(8) cluster
Authors:Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
Deposit date:2022-11-21
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
223D
DownloadVisualize
BU of 223d by Molmil
DIRECT OBSERVATION OF TWO BASE-PAIRING MODES OF A CYTOSINE-THYMINE ANALOGUE WITH GUANINE IN A DNA Z-FORM DUPLEX: SIGNIFICANCE FOR BASE ANALOGUE MUTAGENESIS
Descriptor: DNA (5'-D(*CP*GP*CP*GP*(C46)P*G)-3')
Authors:Moore, M.H, Van Meervelt, L, Salisbury, S.A, Kong Thoo Lin, P, Brown, D.M.
Deposit date:1995-08-01
Release date:1995-12-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Direct observation of two base-pairing modes of a cytosine-thymine analogue with guanine in a DNA Z-form duplex: significance for base analogue mutagenesis.
J.Mol.Biol., 251, 1995
1Z8V
DownloadVisualize
BU of 1z8v by Molmil
The Structure of d(GGCCAATTGG) Complexed with Netropsin
Descriptor: (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'), NETROPSIN
Authors:Van Hecke, K, Nam, P.C, Nguyen, M.T, Van Meervelt, L.
Deposit date:2005-03-31
Release date:2006-03-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Netropsin interactions in the minor groove of d(GGCCAATTGG) studied by a combination of resolution enhancement and ab initio calculations.
Febs J., 272, 2005
6F0Q
DownloadVisualize
BU of 6f0q by Molmil
Crystal structure of Pizza6-AYW
Descriptor: Pizza6-AYW
Authors:Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D.
Deposit date:2017-11-20
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.
Biochem. Biophys. Res. Commun., 497, 2018
6F0S
DownloadVisualize
BU of 6f0s by Molmil
Crystal structure of Pizza6-SYW
Descriptor: Pizza6-SYW
Authors:Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D.
Deposit date:2017-11-20
Release date:2018-03-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.
Biochem. Biophys. Res. Commun., 497, 2018
6F0T
DownloadVisualize
BU of 6f0t by Molmil
Crystal structure of Pizza6-SFW
Descriptor: GLYCEROL, Pizza6-SFW
Authors:Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D.
Deposit date:2017-11-20
Release date:2018-03-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.
Biochem. Biophys. Res. Commun., 497, 2018
6G6P
DownloadVisualize
BU of 6g6p by Molmil
Crystal structure of the computationally designed Ika8 protein: crystal packing No.2 in P63
Descriptor: Ika8
Authors:Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
6G6N
DownloadVisualize
BU of 6g6n by Molmil
Crystal structure of the computationally designed Tako8 protein in C2
Descriptor: Tako8
Authors:Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
6HKW
DownloadVisualize
BU of 6hkw by Molmil
Crystal structure of human SDS22
Descriptor: Protein phosphatase 1 regulatory subunit 7, SULFATE ION
Authors:Heroes, E, Choy, M.S, Page, R, Peti, W, Ulens, C, Van Meervelt, L, Nys, M, Bollen, M.
Deposit date:2018-09-09
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structure-Guided Exploration of SDS22 Interactions with Protein Phosphatase PP1 and the Splicing Factor BCLAF1.
Structure, 27, 2019
427D
DownloadVisualize
BU of 427d by Molmil
5'-D(*CP*GP*CP*(CH2-DM1)GP*CP*G)-3'
Descriptor: DAUNOMYCIN, DNA (5'-D(*CP*GP*CP*(G49)P*CP*G)-3')
Authors:Schuerman, G, Van Meervelt, L.
Deposit date:1998-09-21
Release date:2000-01-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Conformational Flexibility of the DNA Backbone.
J.Am.Chem.Soc., 122, 2000
417D
DownloadVisualize
BU of 417d by Molmil
A THYMINE-LIKE BASE ANALOGUE FORMS WOBBLE PAIRS WITH ADENINE
Descriptor: DNA (5'-D(*CP*AP*CP*GP*(C46)P*G)-3')
Authors:Lin, P.K.T, Schuerman, M.H, Moore, G.S, Van Meervelt, L, Loakes, D, Brown, D.M, Moore, M.H.
Deposit date:1998-07-15
Release date:1998-09-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A thymine-like base analogue forms wobble pairs with adenine in a Z-DNA duplex.
J.Mol.Biol., 282, 1998
432D
DownloadVisualize
BU of 432d by Molmil
D(GGCCAATTGG) COMPLEXED WITH DAPI
Descriptor: 6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE, DNA (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')
Authors:Vlieghe, D, Van Meervelt, L.
Deposit date:1998-10-14
Release date:1999-12-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of d(GGCCAATTGG) complexed with DAPI reveals novel binding mode.
Biochemistry, 38, 1999
6GNL
DownloadVisualize
BU of 6gnl by Molmil
Zr(IV)-substituted Keggin directly binding to the side chain of Hen Egg-White Lysozyme (HEWL)
Descriptor: CHLORIDE ION, Lysozyme C, ZIRCONIUM(IV) PHOSPHOTUNGSTATE KEGGIN
Authors:Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
Deposit date:2018-05-31
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Direct observation of the ZrIVinteraction with the carboxamide bond in a noncovalent complex between Hen Egg White Lysozyme and a Zr-substituted Keggin polyoxometalate.
Acta Crystallogr C Struct Chem, 74, 2018
3KNC
DownloadVisualize
BU of 3knc by Molmil
Crystal structure of the CeNA-RNA hybrid octamer ce(GCGTAGCG):r(CGCUACGC)
Descriptor: 5'-D(*(XGR)P*(XCR)P*(XGR)P*(XTR)P*(XAR)P*(XGR)P*(XCR)P*(XGR)P*(XGR))-3', 5'-R(*CP*GP*CP*UP*AP*CP*GP*C)-3', MAGNESIUM ION
Authors:Ovaere, M, Van Meervelt, L.
Deposit date:2009-11-12
Release date:2010-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Crystal Structure of the CeNA:RNA Hybrid ce(GCGTAGCG):r(CGCUACGC).
Chemistry, 17, 2011
6HY8
DownloadVisualize
BU of 6hy8 by Molmil
Cu(II)-substituted Wells-Dawson binding to Hen Egg-White Lysozyme (HEWL)
Descriptor: CHLORIDE ION, Cu(II)-substituted Wells-Dawson, Lysozyme C, ...
Authors:Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
Deposit date:2018-10-19
Release date:2019-10-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Noncovalent Complexes Formed between Metal-Substituted Polyoxometalates and Hen Egg White Lysozyme
Eur J Inorg Chem, 2019

220113

건을2024-05-22부터공개중

PDB statisticsPDBj update infoContact PDBjnumon