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8CP6
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BU of 8cp6 by Molmil
Type six secretion system exported effector 5 (Tse5)
分子名称: Toxin protein Tse5
著者Gonzalez-Magana, A, Tascon, I, Ubarretxena-Belandia, I, Albesa-Jove, D.
登録日2023-03-01
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (2.45 Å)
主引用文献Structural and functional insights into the delivery of a bacterial Rhs pore-forming toxin to the membrane.
Nat Commun, 14, 2023
3J1Z
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BU of 3j1z by Molmil
Inward-Facing Conformation of the Zinc Transporter YiiP revealed by Cryo-electron Microscopy
分子名称: Cation efflux family protein
著者Coudray, N, Valvo, S, Hu, M, Lasala, R, Kim, C, Vink, M, Zhou, M, Provasi, D, Filizola, M, Tao, J, Fang, J, Penczek, P.A, Ubarretxena-Belandia, I, Stokes, D.L, Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS)
登録日2012-07-24
公開日2012-10-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (13 Å)
主引用文献Inward-facing conformation of the zinc transporter YiiP revealed by cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 110, 2013
6V8P
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BU of 6v8p by Molmil
Structure of DNA Polymerase Zeta (Apo)
分子名称: DNA polymerase delta small subunit, DNA polymerase delta subunit 3, DNA polymerase zeta catalytic subunit, ...
著者Malik, R, Gomez-Llorente, Y, Ubarretxena-Belandia, I, Aggarwal, A.K.
登録日2019-12-11
公開日2020-08-19
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure and mechanism of B-family DNA polymerase zeta specialized for translesion DNA synthesis.
Nat.Struct.Mol.Biol., 27, 2020
6MRC
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BU of 6mrc by Molmil
ADP-bound human mitochondrial Hsp60-Hsp10 football complex
分子名称: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ...
著者Gomez-Llorente, Y, Jebara, F, Patra, M, Malik, R, Nissemblat, S, Azem, A, Hirsch, J.A, Ubarretxena-Belandia, I.
登録日2018-10-12
公開日2020-04-15
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Structural basis for active single and double ring complexes in human mitochondrial Hsp60-Hsp10 chaperonin.
Nat Commun, 11, 2020
6MRD
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BU of 6mrd by Molmil
ADP-bound human mitochondrial Hsp60-Hsp10 half-football complex
分子名称: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ...
著者Gomez-Llorente, Y, Jebara, F, Patra, M, Malik, R, Nissemblat, S, Azem, A, Hirsch, J.A, Ubarretxena-Belandia, I.
登録日2018-10-12
公開日2020-04-15
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.82 Å)
主引用文献Structural basis for active single and double ring complexes in human mitochondrial Hsp60-Hsp10 chaperonin.
Nat Commun, 11, 2020
2GQC
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BU of 2gqc by Molmil
Solution structure of the N-terminal domain of Rhomboid Intramembrane Protease from P. aeruginosa
分子名称: Rhomboid Intramembrane Protease
著者Dutta, K, Del Rio, A, Chavez, J, Ubarretxena-Belandia, I, Ghose, R.
登録日2006-04-20
公開日2007-03-06
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of the N-terminal cytosolic domain of rhomboid intramembrane protease from Pseudomonas aeruginosa: insights into a functional role in intramembrane proteolysis.
J.Mol.Biol., 365, 2007
1QD5
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BU of 1qd5 by Molmil
OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI
分子名称: OUTER MEMBRANE PHOSPHOLIPASE A, octyl beta-D-glucopyranoside
著者Snijder, H.J, Ubarretxena-Belandia, I, Blaauw, M, Kalk, K.H, Verheij, H.M, Egmond, M.R, Dekker, N, Dijkstra, B.W.
登録日1999-07-09
公開日1999-10-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structural evidence for dimerization-regulated activation of an integral membrane phospholipase.
Nature, 401, 1999
1QD6
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OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI
分子名称: 1-HEXADECANOSULFONIC ACID, CALCIUM ION, OUTER MEMBRANE PHOSPHOLIPASE (OMPLA), ...
著者Snijder, H.J, Ubarretxena-Belandia, I, Blaauw, M, Kalk, K.H, Verheij, H.M, Egmond, M.R, Dekker, N, Dijkstra, B.W.
登録日1999-07-09
公開日1999-10-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural evidence for dimerization-regulated activation of an integral membrane phospholipase.
Nature, 401, 1999
6P1H
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BU of 6p1h by Molmil
Cryo-EM Structure of DNA Polymerase Delta Holoenzyme
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (30-MER), ...
著者Jain, R, Rice, W, Aggarwal, A.K.
登録日2019-05-19
公開日2019-10-02
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure and dynamics of eukaryotic DNA polymerase delta holoenzyme.
Nat.Struct.Mol.Biol., 26, 2019
6V93
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BU of 6v93 by Molmil
Structure of DNA Polymerase Zeta/DNA/dNTP Ternary Complex
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA, ...
著者Malik, R, Kopylov, M, Jain, R, Ubarrextena-Belandia, I, Aggarwal, A.K.
登録日2019-12-13
公開日2020-08-19
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure and mechanism of B-family DNA polymerase zeta specialized for translesion DNA synthesis.
Nat.Struct.Mol.Biol., 27, 2020
5IL7
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BU of 5il7 by Molmil
Leucine rich repeat domain of the Chlorobium tepidum Roco protein
分子名称: Rab family protein
著者Gotthardt, K, Wittinghofer, A.
登録日2016-03-04
公開日2016-03-16
最終更新日2017-01-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural model of the dimeric Parkinson's protein LRRK2 reveals a compact architecture involving distant interdomain contacts.
Proc.Natl.Acad.Sci.USA, 113, 2016
7S0T
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BU of 7s0t by Molmil
Structure of DNA polymerase zeta with mismatched DNA
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (30-MER), ...
著者Malik, R, Ubarretxena, I.B, Aggarwal, A.K.
登録日2021-08-31
公開日2022-03-09
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Cryo-EM structure of translesion DNA synthesis polymerase zeta with a base pair mismatch.
Nat Commun, 13, 2022
2I68
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BU of 2i68 by Molmil
Cryo-EM based theoretical model structure of transmembrane domain of the multidrug-resistance antiporter from E. coli EmrE
分子名称: Protein emrE
著者Fleishman, S.J, Harrington, S.E, Enosh, A, Halperin, D, Tate, C.G, Ben-Tal, N.
登録日2006-08-28
公開日2006-10-03
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (7.5 Å)
主引用文献Quasi-symmetry in the Cryo-EM Structure of EmrE Provides the Key to Modeling its Transmembrane Domain
J.Mol.Biol., 364, 2006
1FW3
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BU of 1fw3 by Molmil
OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI
分子名称: OUTER MEMBRANE PHOSPHOLIPASE A
著者Snijder, H.J, Kingma, R.L, Kalk, K.H, Dekker, N, Egmond, M.R, Dijkstra, B.W.
登録日2000-09-21
公開日2001-06-01
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural investigations of calcium binding and its role in activity and activation of outer membrane phospholipase A from Escherichia coli.
J.Mol.Biol., 309, 2001
1FW2
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BU of 1fw2 by Molmil
OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI
分子名称: CALCIUM ION, OUTER MEMBRANE PHOSPHOLIPASE A
著者Snijder, H.J, Kingma, R.L, Kalk, K.H, Dekker, N, Egmond, M.R, Dijkstra, B.W.
登録日2000-09-21
公開日2001-06-01
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural investigations of calcium binding and its role in activity and activation of outer membrane phospholipase A from Escherichia coli.
J.Mol.Biol., 309, 2001
1ILZ
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BU of 1ilz by Molmil
OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI N156A ACTIVE SITE MUTANT pH 6.1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, OUTER MEMBRANE PHOSPHOLIPASE A, octyl beta-D-glucopyranoside
著者Snijder, H.J, Van Eerde, J.H, Kingma, R.L, Kalk, K.H, Dekker, N, Egmond, M.R, Dijkstra, B.W.
登録日2001-05-09
公開日2001-10-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural investigations of the active-site mutant Asn156Ala of outer membrane phospholipase A: function of the Asn-His interaction in the catalytic triad.
Protein Sci., 10, 2001
1ILD
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BU of 1ild by Molmil
OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI N156A ACTIVE SITE MUTANT pH 4.6
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, OUTER MEMBRANE PHOSPHOLIPASE A, octyl beta-D-glucopyranoside
著者Snijder, H.J, Van Eerde, J.H, Kingma, R.L, Kalk, K.H, Dekker, N, Egmond, M.R, Dijkstra, B.W.
登録日2001-05-08
公開日2001-10-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural investigations of the active-site mutant Asn156Ala of outer membrane phospholipase A: function of the Asn-His interaction in the catalytic triad.
Protein Sci., 10, 2001
1IM0
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OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI N156A ACTIVE SITE MUTANT PH 8.3
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, OUTER MEMBRANE PHSOPHOLIPASE A, octyl beta-D-glucopyranoside
著者Snijder, H.J, Van Eerde, J.H, Kingma, R.L, Kalk, K.H, Dekker, N, Egmond, M.R, Dijkstra, B.W.
登録日2001-05-09
公開日2001-10-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Structural investigations of the active-site mutant Asn156Ala of outer membrane phospholipase A: function of the Asn-His interaction in the catalytic triad.
Protein Sci., 10, 2001

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