Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2Z23
DownloadVisualize
BU of 2z23 by Molmil
Crystal structure of Y.pestis oligo peptide binding protein OppA with tri-lysine ligand
分子名称: Periplasmic oligopeptide-binding protein, peptide (LYS)(LYS)(LYS)
著者Tanabe, M, Bertland, T, Mirza, O, Byrne, B, Brown, K.A.
登録日2007-05-17
公開日2007-10-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of OppA and PstS from Yersinia pestis indicate variability of interactions with transmembrane domains.
Acta Crystallogr.,Sect.D, 63, 2007
3A2S
DownloadVisualize
BU of 3a2s by Molmil
Crystal Structure of outer membrane protein PorB from Neisseria meningitidis in complex with sucrose
分子名称: LAURYL DIMETHYLAMINE-N-OXIDE, Outer membrane protein II, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Tanabe, M, Iverson, T.M.
登録日2009-06-04
公開日2010-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB.
Proc.Natl.Acad.Sci.USA, 107, 2010
2Z22
DownloadVisualize
BU of 2z22 by Molmil
Crystal structure of phosphate preplasmic binding protein psts from yersinia pestis
分子名称: PHOSPHATE ION, Periplasmic phosphate-binding protein
著者Tanabe, M, Byrne, B, Brown, K.A, Mirza, O, Bertland, T.
登録日2007-05-17
公開日2007-10-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of OppA and PstS from Yersinia pestis indicate variability of interactions with transmembrane domains.
Acta Crystallogr.,Sect.D, 63, 2007
3VZT
DownloadVisualize
BU of 3vzt by Molmil
Crystal Structure of outer membrane protein PorB from Neisseria meningitidis
分子名称: CESIUM ION, outer membrane protein
著者Tanabe, M, Iverson, T.M.
登録日2012-10-15
公開日2012-11-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB.
Proc.Natl.Acad.Sci.USA, 107, 2010
3VZW
DownloadVisualize
BU of 3vzw by Molmil
Crystal Structure of outer membrane protein PorB from Neisseria meningitidis in complex with galactose
分子名称: CESIUM ION, beta-D-galactopyranose, outer membrane proteins
著者Tanabe, M, Iverson, T.M.
登録日2012-10-17
公開日2012-11-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB.
Proc.Natl.Acad.Sci.USA, 107, 2010
3VZU
DownloadVisualize
BU of 3vzu by Molmil
Crystal Structure of outer membrane protein PorB from Neisseria meningitidis in complex with AMP-PNP
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, outer membrane protein
著者Tanabe, M, Iverson, T.M.
登録日2012-10-15
公開日2013-03-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB.
Proc.Natl.Acad.Sci.USA, 107, 2010
5HXV
DownloadVisualize
BU of 5hxv by Molmil
The crystal structure of thermostable xylanase mutant
分子名称: Endo-1,4-beta-xylanase
著者Watanabe, M, Ishikawa, K.
登録日2016-01-31
公開日2016-07-27
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Construction of Thermophilic Xylanase and Its Structural Analysis
Biochemistry, 55, 2016
5GSL
DownloadVisualize
BU of 5gsl by Molmil
Glycoside hydrolase A
分子名称: 778aa long hypothetical beta-galactosidase, PHOSPHATE ION
著者Watanabe, M, Kamachi, S, Mine, S.
登録日2016-08-16
公開日2017-02-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Glycoside hydrolase A
To Be Published
5GSM
DownloadVisualize
BU of 5gsm by Molmil
Glycoside hydrolase B with product
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Watanabe, M, Kamachi, S, Mine, S.
登録日2016-08-16
公開日2017-02-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Glycoside hydrolase B with product
To Be Published
7CFO
DownloadVisualize
BU of 7cfo by Molmil
Crystal structure of human RXRalpha ligand binding domain complexed with CBTF-EE.
分子名称: 1-[3-(2-ethoxyethoxy)-5,5,8,8-tetramethyl-6,7-dihydronaphthalen-2-yl]-2-(trifluoromethyl)benzimidazole-5-carboxylic acid, GLYCEROL, Retinoic acid receptor RXR-alpha
著者Watanabe, M, Fujihara, M, Motoyama, T, Kawasaki, M, Yamada, S, Takamura, Y, Ito, S, Makishima, M, Nakano, S, Kakuta, H.
登録日2020-06-27
公開日2021-01-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery of a "Gatekeeper" Antagonist that Blocks Entry Pathway to Retinoid X Receptors (RXRs) without Allosteric Ligand Inhibition in Permissive RXR Heterodimers.
J.Med.Chem., 64, 2021
5B5S
DownloadVisualize
BU of 5b5s by Molmil
Crystal structure of a carbohydrate esterase family 3 from Talaromyces cellulolyticus
分子名称: Acetic acid, CALCIUM ION, GLYCEROL, ...
著者Watanabe, M, Ishikawa, K.
登録日2016-05-16
公開日2016-11-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of an acetylesterase from Talaromyces cellulolyticus and the importance of a disulfide bond near the active site
Febs Lett., 589, 2015
2ZP8
DownloadVisualize
BU of 2zp8 by Molmil
The Nature of the TRAP:Anti-TRAP complex
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ...
著者Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H.
登録日2008-07-08
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZP9
DownloadVisualize
BU of 2zp9 by Molmil
The Nature of the TRAP:Anti-TRAP complex
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ...
著者Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H.
登録日2008-07-08
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZD0
DownloadVisualize
BU of 2zd0 by Molmil
Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP)
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB
著者Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G.
登録日2007-11-15
公開日2008-04-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.
Protein Sci., 17, 2008
2ZCZ
DownloadVisualize
BU of 2zcz by Molmil
Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP)
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB
著者Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G.
登録日2007-11-15
公開日2008-04-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.
Protein Sci., 17, 2008
7DE8
DownloadVisualize
BU of 7de8 by Molmil
Crystal Structure of outer membrane protein PorB with G103K mutations from Neisseria meningitidis W135
分子名称: Outer membrane protein
著者Tanabe, M, Kattner, C.
登録日2020-11-02
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献An antibiotic-resistance conferring mutation in a neisserial porin: Structure, ion flux, and ampicillin binding.
Biochim Biophys Acta Biomembr, 1863, 2021
5XGZ
DownloadVisualize
BU of 5xgz by Molmil
Metagenomic glucose-tolerant glycosidase
分子名称: Beta-glycosidase, GLYCEROL, NICKEL (II) ION, ...
著者Watanabe, M, Matsuzawa, T, Yaoi, K.
登録日2017-04-19
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Improved thermostability of a metagenomic glucose-tolerant beta-glycosidase based on its X-ray crystal structure.
Appl.Microbiol.Biotechnol., 101, 2017
7WDO
DownloadVisualize
BU of 7wdo by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ...
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
7WDR
DownloadVisualize
BU of 7wdr by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: 4-nitrophenyl beta-D-glucopyranoside, Beta-glucosidase, SULFATE ION
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
7WDP
DownloadVisualize
BU of 7wdp by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, alpha-D-glucopyranose, ...
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
7WDS
DownloadVisualize
BU of 7wds by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, beta-D-xylopyranose
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
7WDV
DownloadVisualize
BU of 7wdv by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ...
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.812 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
7WDN
DownloadVisualize
BU of 7wdn by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: alpha-D-glucopyranose, beta-glucosidase
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2023-01-04
最終更新日2023-02-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides.
Appl.Microbiol.Biotechnol., 106, 2022
3VU3
DownloadVisualize
BU of 3vu3 by Molmil
Crystal structure of the Hfq and catalase HPII complex
分子名称: Catalase HPII, PROTOPORPHYRIN IX CONTAINING FE, Protein hfq
著者Watanabe, M, Yonekura, K.
登録日2012-06-15
公開日2013-11-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Post-Transcriptional Regulator Hfq Binds Catalase HPII: Crystal Structure of the Complex
Plos One, 8, 2013
4H0O
DownloadVisualize
BU of 4h0o by Molmil
Crystal Structure of Acetate Kinase from Entamoeba histolytica
分子名称: Acetate kinase
著者Thaker, T.M, Tanabe, M, Iverson, T.M.
登録日2012-09-09
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of acetate kinases from the eukaryotic pathogens Entamoeba histolytica and Cryptococcus neoformans.
J.Struct.Biol., 181, 2013

219140

件を2024-05-01に公開中

PDB statisticsPDBj update infoContact PDBjnumon