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1IXU
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BU of 1ixu by Molmil
Solution structure of marinostatin, a protease inhibitor, containing two ester linkages
分子名称: marinostatin
著者Kanaori, K, Kamei, K, Koyama, T, Yasui, T, Takano, R, Imada, C, Tajima, K, Hara, S.
登録日2002-07-04
公開日2004-02-17
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of marinostatin, a natural ester-linked protein protease inhibitor
Biochemistry, 44, 2005
1WZZ
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BU of 1wzz by Molmil
Structure of endo-beta-1,4-glucanase CMCax from Acetobacter xylinum
分子名称: Probable endoglucanase, SULFATE ION
著者Yasutake, Y, Kawano, S, Tajima, K, Yao, M, Satoh, Y, Munekata, M, Tanaka, I, Structural Genomics Consortium (SGC)
登録日2005-03-10
公開日2006-03-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural characterization of the Acetobacter xylinum endo-beta-1,4-glucanase CMCax required for cellulose biosynthesis.
Proteins, 64, 2006
3AJ2
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BU of 3aj2 by Molmil
The structure of AxCeSD octamer (C-terminal HIS-tag) from Acetobacter xylinum
分子名称: Cellulose synthase operon protein D
著者Hu, S.Q, Tajima, K, Zhou, Y, Tanaka, I, Yao, M.
登録日2010-05-20
公開日2010-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of bacterial cellulose synthase subunit D octamer with four inner passageways
Proc.Natl.Acad.Sci.USA, 107, 2010
3AJ1
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BU of 3aj1 by Molmil
The structure of AxCeSD octamer (N-terminal HIS-tag) from Acetobacter xylinum
分子名称: Cellulose synthase operon protein D
著者Hu, S.Q, Tajima, K, Zhou, Y, Tanaka, I, Yao, M.
登録日2010-05-20
公開日2010-10-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of bacterial cellulose synthase subunit D octamer with four inner passageways
Proc.Natl.Acad.Sci.USA, 107, 2010
3A8E
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BU of 3a8e by Molmil
The structure of AxCesD octamer complexed with cellopentaose
分子名称: Cellulose synthase operon protein D, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Hu, S.Q, Tajima, K, Zhou, Y, Yao, M, Tanaka, I.
登録日2009-10-05
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of bacterial cellulose synthase subunit D octamer with four inner passageways
Proc.Natl.Acad.Sci.USA, 107, 2010
3WOC
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BU of 3woc by Molmil
Crystal structure of a prostate-specific WGA16 glycoprotein lectin, form II
分子名称: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, SULFATE ION, ...
著者Garenaux, E, Kanagawa, M, Tsuchiyama, T, Hori, K, Kanazawa, T, Goshima, A, Chiba, M, Yasue, H, Ikeda, A, Yamaguchi, Y, Sato, C, Kitajima, K.
登録日2013-12-26
公開日2014-12-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Discovery, Primary, and Crystal Structures and Capacitation-related Properties of a Prostate-derived Heparin-binding Protein WGA16 from Boar Sperm
J.Biol.Chem., 290, 2015
3WOB
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BU of 3wob by Molmil
Crystal structure of a prostate-specific WGA16 glycoprotein lectin, form I
分子名称: hypothetical protein
著者Garenaux, E, Kanagawa, M, Tsuchiyama, T, Hori, K, Kanazawa, T, Goshima, A, Chiba, M, Yasue, H, Ikeda, A, Yamaguchi, Y, Sato, C, Kitajima, K.
登録日2013-12-26
公開日2014-12-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery, Primary, and Crystal Structures and Capacitation-related Properties of a Prostate-derived Heparin-binding Protein WGA16 from Boar Sperm
J.Biol.Chem., 290, 2015
3WBD
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BU of 3wbd by Molmil
Crystal structure of anti-polysialic acid antibody single chain Fv fragment (mAb735) complexed with octasialic acid
分子名称: CITRATE ANION, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid, single chain Fv fragment of mAb735
著者Nagae, M, Ikeda, A, Hanashima, S, Kitajima, K, Sato, C, Yamaguchi, Y.
登録日2013-05-14
公開日2013-10-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of anti-polysialic acid antibody single chain Fv fragment complexed with octasialic acid: insight into the binding preference for polysialic acid.
J.Biol.Chem., 288, 2013
4I86
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BU of 4i86 by Molmil
Crystal structure of PilZ domain of CeSA from cellulose synthesizing bacterium
分子名称: Cellulose synthase 1
著者Fujiwara, T, Komoda, K, Sakurai, N, Tanaka, I, Yao, M.
登録日2012-12-03
公開日2013-04-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.098 Å)
主引用文献The c-di-GMP recognition mechanism of the PilZ domain of bacterial cellulose synthase subunit A
Biochem.Biophys.Res.Commun., 431, 2013
5XW7
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BU of 5xw7 by Molmil
Crystal structure of the flexible tandem repeat domain of bacterial cellulose synthase subunit C
分子名称: Cellulose synthase subunit C
著者Nojima, S, Kato, K, Yao, M.
登録日2017-06-29
公開日2017-11-01
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.272 Å)
主引用文献Crystal structure of the flexible tandem repeat domain of bacterial cellulose synthesis subunit C
Sci Rep, 7, 2017
7CNQ
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BU of 7cnq by Molmil
Crystal structure of Agrobacterium tumefaciens aconitase X (holo-form)
分子名称: (2~{S},3~{R})-3-oxidanylpyrrolidine-2-carboxylic acid, FE2/S2 (INORGANIC) CLUSTER, cis-3-hydroxy-L-proline dehydratase
著者Murase, Y, Watanabe, Y, Watanabe, S.
登録日2020-08-03
公開日2021-06-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily.
Commun Biol, 4, 2021
7CNR
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BU of 7cnr by Molmil
Crystal structure of Thermococcus kodakaraensis aconitase X (apo-form)
分子名称: DUF521 domain-containing protein, FE3-S4 CLUSTER, UPF0107 protein TK1248
著者Murase, Y, Watanabe, Y, Watanabe, S.
登録日2020-08-03
公開日2021-06-16
最終更新日2022-12-28
実験手法X-RAY DIFFRACTION (3.39 Å)
主引用文献Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily.
Commun Biol, 4, 2021
7CNP
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BU of 7cnp by Molmil
Crystal structure of Agrobacterium tumefaciens aconitase X (apo-form)
分子名称: FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION, cis-3-hydroxy-L-proline dehydratase
著者Murase, Y, Watanabe, Y, Watanabe, S.
登録日2020-08-03
公開日2021-06-16
最終更新日2022-12-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily.
Commun Biol, 4, 2021
7CNS
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BU of 7cns by Molmil
Crystal structure of Thermococcus kodakaraensis aconitase X (holo-form)
分子名称: (3R)-3-HYDROXY-3-METHYL-5-(PHOSPHONOOXY)PENTANOIC ACID, DUF521 domain-containing protein, FE3-S4 CLUSTER, ...
著者Murase, Y, Watanabe, Y, Watanabe, S.
登録日2020-08-03
公開日2021-06-16
最終更新日2022-12-28
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily.
Commun Biol, 4, 2021
7D2R
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BU of 7d2r by Molmil
Crystal structure of Agrobacterium tumefaciens aconitase X mutant - S449C/C510V
分子名称: FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, SODIUM ION, ...
著者Murase, Y, Watanabe, Y, Watanabe, S.
登録日2020-09-17
公開日2021-06-16
最終更新日2022-12-28
実験手法X-RAY DIFFRACTION (2.005 Å)
主引用文献Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily.
Commun Biol, 4, 2021
7F81
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BU of 7f81 by Molmil
Structure of the bacterial cellulose synthase subunit Z from Enterobacter sp. CJF-002
分子名称: GLYCEROL, Glucanase, S,R MESO-TARTARIC ACID
著者Fujiwara, T, Fujishima, A, Yao, M.
登録日2021-06-30
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural snapshot of a glycoside hydrolase family 8 endo-beta-1,4-glucanase capturing the state after cleavage of the scissile bond.
Acta Crystallogr.,Sect.D, 78, 2022
7F82
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BU of 7f82 by Molmil
Structure of the bacterial cellulose synthase subunit Z in complex with cellooligosaccharides from Enterobacter sp. CJF-002
分子名称: Glucanase, S,R MESO-TARTARIC ACID, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
著者Fujiwara, T, Fujishima, A, Yao, M.
登録日2021-06-30
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural snapshot of a glycoside hydrolase family 8 endo-beta-1,4-glucanase capturing the state after cleavage of the scissile bond.
Acta Crystallogr.,Sect.D, 78, 2022
6GF6
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BU of 6gf6 by Molmil
Molecular basis of egg coat filament cross-linking: high-resolution structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
著者Nishimura, K, Jovine, L.
登録日2018-04-29
公開日2019-06-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
6GF7
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BU of 6gf7 by Molmil
Molecular basis of egg coat filament cross-linking: Zn-SAD structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
著者Nishimura, K, Jovine, L.
登録日2018-04-29
公開日2019-06-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
6GF8
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BU of 6gf8 by Molmil
Molecular basis of egg coat filament cross-linking: structure of the glycosylated ZP1 ZP-N1 domain homodimer
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nishimura, K, Jovine, L.
登録日2018-04-29
公開日2019-06-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
3NK4
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BU of 3nk4 by Molmil
Crystal structure of full-length sperm receptor ZP3 at 2.0 A resolution
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CITRATE ANION, Zona pellucida 3
著者Monne, M, Jovine, L.
登録日2010-06-18
公開日2010-11-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into Egg Coat Assembly and Egg-Sperm Interaction from the X-Ray Structure of Full-Length ZP3.
Cell(Cambridge,Mass.), 143, 2010

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