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4QPZ
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BU of 4qpz by Molmil
Crystal structure of the formolase FLS_v2 in space group P 21
分子名称: Formolase, MAGNESIUM ION, THIAMINE DIPHOSPHATE
著者Shen, B.W, Siegel, J.B, Stoddard, B.L, Baker, D.
登録日2014-06-25
公開日2015-03-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Computational protein design enables a novel one-carbon assimilation pathway.
Proc.Natl.Acad.Sci.USA, 112, 2015
4QQ8
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BU of 4qq8 by Molmil
Crystal structure of the formolase FLS in space group P 43 21 2
分子名称: 1,2-ETHANEDIOL, Formolase, MAGNESIUM ION, ...
著者Shen, B.W, Siegel, J.B, Stoddard, B.L.
登録日2014-06-26
公開日2015-03-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Computational protein design enables a novel one-carbon assimilation pathway.
Proc.Natl.Acad.Sci.USA, 112, 2015
8FHB
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BU of 8fhb by Molmil
Protein 32 with aldehyde deformylating oxidase activity from Synechococcus sp.
分子名称: FE (III) ION, tRNA-(MS[2]IO[6]A)-hydroxylase
著者Arenas, R, Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2022-12-13
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Protein 32 with aldehyde deformylating oxidase activity from Synechococcus sp.
To Be Published
8FHC
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BU of 8fhc by Molmil
Protein 41 with aldehyde deformylating oxidase activity from Gamma proteobacterium
分子名称: BROMIDE ION, CHOLIC ACID, FE (III) ION, ...
著者Arenas, R, Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2022-12-13
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Protein 41 with aldehyde deformylating oxidase activity from Gamma proteobacterium
To Be Published
6D9F
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BU of 6d9f by Molmil
Protein 60 with aldehyde deformylating oxidase activity from Kitasatospora setae
分子名称: 1,2-ETHANEDIOL, FE (III) ION, Putative VlmB homolog, ...
著者Arenas, R, Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2018-04-28
公開日2019-05-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Discovery, Design, and Structural Characterization of Alkane-Producing Enzymes across the Ferritin-like Superfamily.
Biochemistry, 59, 2020
5UX1
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BU of 5ux1 by Molmil
Protein 43 with aldehyde deformylating oxygenase activity from Synechococcus
分子名称: FE (III) ION, tRNA-(MS(2)IO(6)A)-hydroxylase-like
著者Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2017-02-21
公開日2018-02-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Protein 43 with aldehyde deformylating oxygenase activity from Synechococcus
To Be Published
5UXI
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BU of 5uxi by Molmil
Protein 4 with aldehyde deformylating oxygenase activity from Nostoc puntiforme
分子名称: Aldehyde decarbonylase, DECYLAMINE-N,N-DIMETHYL-N-OXIDE
著者Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2017-02-22
公開日2018-02-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Protein 4 with aldehyde deformylating oxygenase activity from Nostoc puntiforme
To Be Published
5UX2
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BU of 5ux2 by Molmil
Protein 19 with aldehyde deformylating oxidase activity from Synechococcus
分子名称: Aldehyde decarbonylase, FE (III) ION, PROPANOIC ACID
著者Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2017-02-21
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Protein 19 with aldehyde deformylating oxidase activity from Synechococcus
To Be Published
5UXG
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BU of 5uxg by Molmil
Protein 84 with aldehyde deformylating oxygenase activity from Sulfolobus tokodaii (monoclinic)
分子名称: PHOSPHATE ION, aldehyde deformylating oxygenase
著者Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2017-02-22
公開日2018-02-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Protein 84 with aldehyde deformylating oxygenase activity from Sulfolobus tokodaii (monoclinic)
To Be Published
5V4T
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BU of 5v4t by Molmil
Protein 84 with aldehyde deformylating oxygenase activity from Sulfolobus tokodaii (orthorhombic form)
分子名称: 1,2-ETHANEDIOL, FE (III) ION, hypothetic aldehyde deformylating oxygenase
著者Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2017-03-10
公開日2018-03-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Protein 84 with aldehyde deformylating oxygenase activity from Sulfolobus tokodaii (orthorhombic form)
To Be Published
3I1C
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BU of 3i1c by Molmil
Crystal Structure of a Novel Engineered Diels-Alderase: DA_20_00_A74I
分子名称: Diisopropyl-fluorophosphatase, GLYCEROL
著者Lambert, A.R, Stoddard, B.L.
登録日2009-06-26
公開日2009-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Computational design of an enzyme catalyst for a stereoselective bimolecular Diels-Alder reaction.
Science, 329, 2010
3U0S
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BU of 3u0s by Molmil
Crystal Structure of an Enzyme Redesigned Through Multiplayer Online Gaming: CE6
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Diisopropyl-fluorophosphatase, GLYCEROL, ...
著者Bale, J.B, Shen, B.W, Stoddard, B.L.
登録日2011-09-29
公開日2012-02-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Increased Diels-Alderase activity through backbone remodeling guided by Foldit players.
Nat.Biotechnol., 30, 2012
6VPT
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BU of 6vpt by Molmil
Crystal structure and mechanistic molecular modeling studies of Rv3377c: the Mycobacterium tuberculosis diterpene cyclase
分子名称: Cyclase
著者Zhang, T, Prach, L, DiMaio, F, Siegel, J.
登録日2020-02-04
公開日2020-12-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.718 Å)
主引用文献Crystal Structure and Mechanistic Molecular Modeling Studies of Mycobacterium tuberculosis Diterpene Cyclase Rv3377c.
Biochemistry, 59, 2020
7T1J
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BU of 7t1j by Molmil
Crystal structure of RUBISCO from Rhodospirillaceae bacterium BRH_c57
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
著者Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
登録日2021-12-02
公開日2022-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
7T1C
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BU of 7t1c by Molmil
Crystal structure of RUBISCO from Sulfurivirga caldicuralii
分子名称: Ribulose-bisphosphate carboxylase
著者Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
登録日2021-12-01
公開日2022-09-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
4O5T
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BU of 4o5t by Molmil
Crystal structure of Diels-Alderase CE20 in complex with a product analog
分子名称: 4-{[2-(phosphonooxy)ethyl]carbamoyl}benzyl [(1R,6S)-6-(dimethylcarbamoyl)cyclohex-2-en-1-yl]carbamate, Diisopropyl-fluorophosphatase
著者Beck, T, Preiswerk, N, Mayer, C, Hilvert, D.
登録日2013-12-20
公開日2014-06-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Impact of scaffold rigidity on the design and evolution of an artificial Diels-Alderase.
Proc.Natl.Acad.Sci.USA, 111, 2014
4O5S
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BU of 4o5s by Molmil
Crystal structure of Diels-Alderase CE11
分子名称: Diisopropyl-fluorophosphatase
著者Beck, T, Preiswerk, N, Mayer, C, Hilvert, D.
登録日2013-12-20
公開日2014-06-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Impact of scaffold rigidity on the design and evolution of an artificial Diels-Alderase.
Proc.Natl.Acad.Sci.USA, 111, 2014
5UWZ
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BU of 5uwz by Molmil
Protein 12 with aldehyde deformylating oxygenase activity from Gloeobacter violaceus
分子名称: 1,2-ETHANEDIOL, Aldehyde decarbonylase, STEARIC ACID
著者Wilson, D.K.
登録日2017-02-21
公開日2018-02-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Protein 12 with aldehyde deformylating oxygenase activity from Gloeobacter violaceus
To Be Published
4F5J
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BU of 4f5j by Molmil
Rational Design and Directed Evolution for Conversion of Substrate Specificity from E.coli Aspartate Aminotransferase to Tyrosine Aminotransferase: Mutant P5.
分子名称: Aspartate aminotransferase
著者Addington, T.A, Fisher, A.J, Toney, M.D.
登録日2012-05-13
公開日2013-02-13
最終更新日2013-04-24
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013
4F5F
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BU of 4f5f by Molmil
Structure of Aspartate Aminotransferase Conversion to Tyrosine Aminotransferase: Chimera P1.
分子名称: Aspartate aminotransferase
著者Addington, T.A, Fisher, A.J, Toney, M.D.
登録日2012-05-13
公開日2013-02-13
最終更新日2013-04-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013
4F5M
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BU of 4f5m by Molmil
Wild-Type E. coli Aspartate Aminotransferase: A Template For The Interconversion of Substrate Specificity and Activity To Tyrosine Aminotransferase By The JANUS Algorithm.
分子名称: 1,2-ETHANEDIOL, Aspartate aminotransferase
著者Addington, T.A, Fisher, A.J, Toney, M.D.
登録日2012-05-13
公開日2013-02-13
最終更新日2013-04-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013
4F5I
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BU of 4f5i by Molmil
Substrate Specificity Conversion of E. coli Pyridoxal-5'-Phosphate Dependent Aspartate Aminotransferase to Tyrosine Aminotransferase: Chimera P4.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Aspartate aminotransferase
著者Addington, T.A, Fisher, A.J, Toney, M.D.
登録日2012-05-13
公開日2013-02-13
最終更新日2013-04-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013
4F5H
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BU of 4f5h by Molmil
Intercoversion of Substrate Specificity: E. coli Aspatate Aminotransferase to Tyrosine Aminotransferase: Chimera P3.
分子名称: Aspartate aminotransferase
著者Addington, T.A, Fisher, A.J, Toney, M.D.
登録日2012-05-13
公開日2013-02-13
最終更新日2013-04-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013
4F5L
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BU of 4f5l by Molmil
A Theoretical Optimized Mutant for the Conversion of Substrate Specificity and Activity of Aspartate Aminotransferase to Tyrosine Aminotransferase: Chimera P7.
分子名称: 1,2-ETHANEDIOL, Aspartate aminotransferase
著者Addington, T.A, Fisher, A.J, Toney, M.D.
登録日2012-05-13
公開日2013-05-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Janus: an algorithm for ranking functional importance of residues from protein sequence alignments.
To be Published
4F5K
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BU of 4f5k by Molmil
Substrate Specificity Conversion of Aspartate Aminotransferase to Tyrosine Aminotransferase By The JANUS Algorithm: Chimera P6.
分子名称: Aspartate aminotransferase
著者Addington, T.A, Fisher, A.J, Toney, M.D.
登録日2012-05-13
公開日2013-02-13
最終更新日2013-04-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013

 

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