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1BPW
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BU of 1bpw by Molmil
BETAINE ALDEHYDE DEHYDROGENASE FROM COD LIVER
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (ALDEHYDE DEHYDROGENASE)
Authors:Johansson, K, El Ahmad, M, Ramaswamy, S, Hjelmqvist, L, Jornvall, H, Eklund, H.
Deposit date:1998-08-12
Release date:1998-08-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of betaine aldehyde dehydrogenase at 2.1 A resolution.
Protein Sci., 7, 1998
2OCP
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BU of 2ocp by Molmil
Crystal Structure of Human Deoxyguanosine Kinase
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Deoxyguanosine kinase
Authors:Johansson, K, Ramaswamy, S, Ljungkrantz, C, Knecht, W, Piskur, J, Munch-Petersen, B, Eriksson, S, Eklund, H.
Deposit date:2006-12-21
Release date:2007-01-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for Substrate Specificities of Cellular Deoxyribonucleoside Kinases.
Nat.Struct.Biol., 8, 2001
4DXH
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BU of 4dxh by Molmil
Horse liver alcohol dehydrogenase complexed with NAD+ and 2,2,2-trifluoroethanol
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), ...
Authors:Plapp, B.V, Ramaswamy, S.
Deposit date:2012-02-27
Release date:2012-04-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Atomic-Resolution Structures of Horse Liver Alcohol Dehydrogenase with NAD(+) and Fluoroalcohols Define Strained Michaelis Complexes.
Biochemistry, 51, 2012
5VJ5
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BU of 5vj5 by Molmil
Horse Liver Alcohol Dehydrogenase Complexed with 1,10-Phenanthroline
Descriptor: 1,10-PHENANTHROLINE, Alcohol dehydrogenase E chain, ZINC ION
Authors:Plapp, B.V, Baskar Raj, S, Ramaswamy, S.
Deposit date:2017-04-18
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis.
Biochemistry, 56, 2017
4OJA
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BU of 4oja by Molmil
Structure of Hydra Cu-Zn superoxide dismutase
Descriptor: COPPER (II) ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ...
Authors:Anupama, A, Ramaswamy, S, Sai Sudha, P.
Deposit date:2014-01-21
Release date:2015-01-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.277 Å)
Cite:Structure of a Cu-Zn Superoxide dismutase at an evolutionary crossroad.
To be Published
7MDH
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BU of 7mdh by Molmil
STRUCTURAL BASIS FOR LIGHT ACITVATION OF A CHLOROPLAST ENZYME. THE STRUCTURE OF SORGHUM NADP-MALATE DEHYDROGENASE IN ITS OXIDIZED FORM
Descriptor: PROTEIN (MALATE DEHYDROGENASE), ZINC ION
Authors:Johansson, K, Ramaswamy, S, Saarinen, M, Lemaire-Chamley, M, Issakidis-Bourguet, E, Miginiac-Maslow, M, Eklund, H.
Deposit date:1999-02-16
Release date:1999-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for light activation of a chloroplast enzyme: the structure of sorghum NADP-malate dehydrogenase in its oxidized form.
Biochemistry, 38, 1999
6L44
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BU of 6l44 by Molmil
Monomeric structure of monellin loop1 mutant with QVPAG motif
Descriptor: SULFATE ION, Single chain Monellin
Authors:Manjula, R, Ramaswamy, S, Gosavi, S.
Deposit date:2019-10-16
Release date:2021-04-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.492 Å)
Cite:The monomer structure of Monellin Loop1 mutant
To Be Published
6L4N
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BU of 6l4n by Molmil
Domain swapped dimer of Monellin loop1 mutant with QVPAG motif
Descriptor: MAGNESIUM ION, Single chain Monellin
Authors:Manjula, R, Ramaswamy, S, Gosavi, S.
Deposit date:2019-10-18
Release date:2021-04-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.431 Å)
Cite:Domain swapped dimer of Monellin lopp1 mutant with QVPAG motif
To Be Published
6L4I
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BU of 6l4i by Molmil
Monomeric structure of monellin loop1 mutant with QEPKG motif
Descriptor: Single chain Monellin
Authors:Manjula, R, Ramaswamy, S, Gosavi, S.
Deposit date:2019-10-17
Release date:2021-04-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Monomer structure of Loop1 mutant Monellin with QEPKG motif
To Be Published
1JU9
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BU of 1ju9 by Molmil
HORSE LIVER ALCOHOL DEHYDROGENASE VAL292SER MUTANT
Descriptor: ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Rubach, J.K, Ramaswamy, S, Plapp, B.V.
Deposit date:2001-08-24
Release date:2001-09-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Contributions of valine-292 in the nicotinamide binding site of liver alcohol dehydrogenase and dynamics to catalysis.
Biochemistry, 40, 2001
1VIP
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BU of 1vip by Molmil
ANTICOAGULANT CLASS II PHOSPHOLIPASE A2 FROM THE VENOM OF VIPERA RUSSELLI RUSSELLI
Descriptor: PHOSPHOLIPASE A2, SULFATE ION
Authors:Carredano, E, Westerlund, B, Persson, B, Saarinen, M, Ramaswamy, S, Eaker, D, Eklund, H.
Deposit date:1997-02-27
Release date:1997-06-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The three-dimensional structures of two toxins from snake venom throw light on the anticoagulant and neurotoxic sites of phospholipase A2.
Toxicon, 36, 1998
1XSM
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BU of 1xsm by Molmil
PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE FROM MOUSE
Descriptor: FE (III) ION, RIBONUCLEOTIDE REDUCTASE R2
Authors:Kauppi, B, Nielsen, B.N, Ramaswamy, S, Kjoller-Larsen, I, Thelander, M, Thelander, L, Eklund, H.
Deposit date:1996-07-03
Release date:1997-01-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The three-dimensional structure of mammalian ribonucleotide reductase protein R2 reveals a more-accessible iron-radical site than Escherichia coli R2.
J.Mol.Biol., 262, 1996
2B24
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BU of 2b24 by Molmil
Crystal structure of naphthalene 1,2-dioxygenase from Rhodococcus sp. bound to indole
Descriptor: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, INDOLE, ...
Authors:Gakhar, L, Malik, Z.A, Allen, C.C, Lipscomb, D.A, Larkin, M.J, Ramaswamy, S.
Deposit date:2005-09-16
Release date:2005-10-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and Increased Thermostability of Rhodococcus sp. Naphthalene 1,2-Dioxygenase.
J.Bacteriol., 187, 2005
2B1X
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BU of 2b1x by Molmil
Crystal structure of naphthalene 1,2-dioxygenase from Rhodococcus sp.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Gakhar, L, Malik, Z.A, Allen, C.C, Lipscomb, D.A, Larkin, M.J, Ramaswamy, S.
Deposit date:2005-09-16
Release date:2005-10-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and Increased Thermostability of Rhodococcus sp. Naphthalene 1,2-Dioxygenase.
J.Bacteriol., 187, 2005
5NVA
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BU of 5nva by Molmil
Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel Na+-site
Descriptor: N-acetyl-beta-neuraminic acid, Putative sodium:solute symporter, SODIUM ION
Authors:Wahlgren, W.Y, North, R.A, Dunevall, E, Goyal, P, Grabe, M, Dobson, R, Abramson, J, Ramaswamy, S, Friemann, R.
Deposit date:2017-05-03
Release date:2018-04-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Substrate-bound outward-open structure of a Na+-coupled sialic acid symporter reveals a new Na+site.
Nat Commun, 9, 2018
5NV9
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BU of 5nv9 by Molmil
Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel Na+-site
Descriptor: DODECYL-BETA-D-MALTOSIDE, N-acetyl-beta-neuraminic acid, PHOSPHATE ION, ...
Authors:Wahlgren, W.Y, North, R.A, Dunevall, E, Paz, A, Goyal, P, Bisignano, P, Grabe, M, Dobson, R, Abramson, J, Ramaswamy, S, Friemann, R.
Deposit date:2017-05-03
Release date:2018-04-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Substrate-bound outward-open structure of a Na+-coupled sialic acid symporter reveals a new Na+site.
Nat Commun, 9, 2018
1GUZ
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BU of 1guz by Molmil
Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases
Descriptor: MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Dalhus, B, Sarinen, M, Sauer, U.H, Eklund, P, Johansson, K, Karlsson, A, Ramaswamy, S, Bjork, A, Synstad, B, Naterstad, K, Sirevag, R, Eklund, H.
Deposit date:2002-02-04
Release date:2002-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases
J.Mol.Biol., 318, 2002
1GV0
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BU of 1gv0 by Molmil
Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases
Descriptor: MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Dalhus, B, Sarinen, M, Sauer, U.H, Eklund, P, Johansson, K, Karlsson, A, Ramaswamy, S, Bjork, A, Synstad, B, Naterstad, K, Sirevag, R, Eklund, H.
Deposit date:2002-02-04
Release date:2002-02-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases
J.Mol.Biol., 318, 2002
1GUY
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BU of 1guy by Molmil
Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases
Descriptor: CADMIUM ION, MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Dalhus, B, Sarinen, M, Sauer, U.H, Eklund, P, Johansson, K, Karlsson, A, Ramaswamy, S, Bjork, A, Synstad, B, Naterstad, K, Sirevag, R, Eklund, H.
Deposit date:2002-02-04
Release date:2002-02-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases
J.Mol.Biol., 318, 2002
1GV1
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BU of 1gv1 by Molmil
Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases
Descriptor: MALATE DEHYDROGENASE
Authors:Dalhus, B, Sarinen, M, Sauer, U.H, Eklund, P, Johansson, K, Karlsson, A, Ramaswamy, S, Bjork, A, Synstad, B, Naterstad, K, Sirevag, R, Eklund, H.
Deposit date:2002-02-04
Release date:2002-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases
J.Mol.Biol., 318, 2002
3DQY
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BU of 3dqy by Molmil
Crystal structure of Toluene 2,3-Dioxygenase Ferredoxin
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Toluene 1,2-dioxygenase system ferredoxin subunit
Authors:Friemann, R, Lee, K, Brown, E.N, Gibson, D.T, Eklund, H, Ramaswamy, S.
Deposit date:2008-07-10
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system
Acta Crystallogr.,Sect.D, 65, 2009
7EUA
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BU of 7eua by Molmil
X-ray structure of a P93A Monellin mutant
Descriptor: Monellin, SULFATE ION
Authors:Manjula, R, Bhatia, S, Jayant, B, Ramaswamy, S, Gosavi, S.
Deposit date:2021-05-16
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:X-ray structure of a P93A Monellin mutant
To Be Published
3F1W
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BU of 3f1w by Molmil
Crystal structure of a mutant proliferating cell nuclear antigen that blocks translesion synthesis
Descriptor: Proliferating cell nuclear antigen
Authors:Freudenthal, B.D, Ramaswamy, S, Washington, M.T.
Deposit date:2008-10-28
Release date:2008-12-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Structure of a Mutant Form of Proliferating Cell Nuclear Antigen That Blocks Translesion DNA Synthesis.
Biochemistry, 47, 2008
7JQA
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BU of 7jqa by Molmil
EQADH-NADH-4-BROMOBENZYL ALCOHOL, P21
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alcohol dehydrogenase E chain, ...
Authors:Plapp, B.V, Ramaswamy, S.
Deposit date:2020-08-10
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Alternative binding modes in abortive NADH-alcohol complexes of horse liver alcohol dehydrogenase.
Arch.Biochem.Biophys., 701, 2021
5VKR
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Horse liver alcohol dehydrogenase complexed with adenosine-5-diphosphoribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Alcohol dehydrogenase E chain, ZINC ION
Authors:Plapp, B.V, Rubach, J.K, Ramaswamy, S.
Deposit date:2017-04-22
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis.
Biochemistry, 56, 2017

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