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1TG7
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BU of 1tg7 by Molmil
Native structure of beta-galactosidase from Penicillium sp.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Rojas, A.L, Nagem, R.A.P, Neustroev, K.N, Arand, M, Adamska, M, Eneyskaya, E.V, Kulminskaya, A.A, Garratt, R.C, Golubev, A.M, Polikarpov, I.
登録日2004-05-28
公開日2004-11-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structures of beta-Galactosidase from Penicillium sp. and its Complex with Galactose
J.Mol.Biol., 343, 2004
6WGD
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BU of 6wgd by Molmil
Crystal structure of a 6-phospho-beta-glucosidase from Bacillus licheniformis
分子名称: 1,2-ETHANEDIOL, 6-phospho-beta-glucosidase
著者Liberato, M.V, Popov, A, Polikarpov, I.
登録日2020-04-05
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray Structure, Bioinformatics Analysis, and Substrate Specificity of a 6-Phospho-beta-glucosidase Glycoside Hydrolase 1 Enzyme from Bacillus licheniformis .
J.Chem.Inf.Model., 60, 2020
6WQW
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BU of 6wqw by Molmil
Thermobacillus composti GH10 xylanase
分子名称: Beta-xylanase, beta-D-xylopyranose
著者Briganti, L, Polikarpov, I.
登録日2020-04-29
公開日2021-04-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Transformation of xylan into value-added biocommodities using Thermobacillus composti GH10 xylanase.
Carbohydr Polym, 247, 2020
6WPX
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BU of 6wpx by Molmil
Crystal structure of Bacillus licheniformis lipase BlEst2 in propetide form
分子名称: BlEst2, IODIDE ION
著者Nakamura, A.M, Godoy, A.S, Kadowaki, M.A.S, Polikarpov, I.
登録日2020-04-28
公開日2021-06-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The first structure of Bacillus licheniformis lipase BlEst2 in its propeptide and mature form revealing molecular details of inhibition by its C-terminal domains
To Be Published
6WPY
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BU of 6wpy by Molmil
Crystal structure of Bacillus licheniformis lipase BlEst2 in mature form
分子名称: BlEst2
著者Nakamura, A.M, Godoy, A.S, Kadowaki, M.A.S, Polikarpov, I.
登録日2020-04-28
公開日2021-06-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The first structure of Bacillus licheniformis lipase BlEst2 in its propeptide and mature form revealing molecular details of inhibition by its C-terminal domains
To Be Published
5KSR
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BU of 5ksr by Molmil
Stationary phase survival protein E (SurE) from Xylella fastidiosa - XFSurE-TB (Tetramer Bigger).
分子名称: 5'-nucleotidase SurE, CHLORIDE ION, IODIDE ION, ...
著者Machado, A.T.P, Fonseca, E.M.B, Dos Reis, M.A, Saraiva, A.M, Dos Santos, C.A, De Toledo, M.A, Polikarpov, I, De Souza, A.P, De Aparicio, R, Iulek, J.
登録日2016-07-09
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.
Proteins, 85, 2017
5KJO
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BU of 5kjo by Molmil
X-ray structure of PcCel45A expressed in Aspergillus nidullans
分子名称: 1,2-ETHANEDIOL, Endoglucanase V-like protein
著者Godoy, A.S, Ramia, M.P, Camilo, C.M, Polikarpov, I.
登録日2016-06-20
公開日2017-06-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献X-ray structure of PcCel45A expressed in Aspergillus nidullans
To Be Published
5KJQ
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BU of 5kjq by Molmil
X-ray structure of PcCel45A in complex with cellobiose expressed in Aspergillus nidullans
分子名称: Endoglucanase V-like protein, SULFATE ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Godoy, A.S, Ramia, M.P, Camilo, C.M, Polikarpov, I.
登録日2016-06-20
公開日2017-06-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.704 Å)
主引用文献Structure, computational and biochemical analysis of PcCel45A endoglucanase from Phanerochaete chrysosporium and catalytic mechanisms of GH45 subfamily C members.
Sci Rep, 8, 2018
5KSQ
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BU of 5ksq by Molmil
Stationary phase survival protein E (SurE) from Xylella fastidiosa
分子名称: 5'-nucleotidase SurE, IODIDE ION, MANGANESE (II) ION, ...
著者Machado, A.T.P, Fonseca, E.M.B, Dos Reis, M.A, Saraiva, A.M, Dos Santos, C.A, De Toledo, M.A, Polikarpov, I, De Souza, A.P, Aparicio, R, Iulek, J.
登録日2016-07-09
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.
Proteins, 85, 2017
6XOF
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BU of 6xof by Molmil
Crystal structure of SCLam, a non-specific endo-beta-1,3(4)-glucanase from family GH16
分子名称: CALCIUM ION, GH16 family protein, GLYCEROL
著者Liberato, M.V, Bernardes, A, Polikarpov, I, Squina, F.
登録日2020-07-07
公開日2021-02-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds.
J.Biol.Chem., 296, 2021
5KSS
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BU of 5kss by Molmil
Stationary phase survival protein E (SurE) from Xylella fastidiosa - XFSurE-Ds (Dimer Smaller)
分子名称: 5'-nucleotidase SurE, CHLORIDE ION, IODIDE ION, ...
著者Machado, A.T.P, Fonseca, E.M.B, Dos Reis, M.A, Saraiva, A.M, Dos Santos, C.A, De Toledo, A.M.S, Polikarpov, I, De Souza, A.P, Aparicio, R, Iulek, J.
登録日2016-07-09
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.
Proteins, 85, 2017
1L9W
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BU of 1l9w by Molmil
CRYSTAL STRUCTURE OF 3-DEHYDROQUINASE FROM SALMONELLA TYPHI COMPLEXED WITH REACTION PRODUCT
分子名称: 3-AMINO-4,5-DIHYDROXY-CYCLOHEX-1-ENECARBOXYLATE, 3-dehydroquinate dehydratase aroD
著者Lee, W.H, Perles, L.A, Nagem, R.A.P, Shrive, A.K, Hawkins, A, Sawyer, L, Polikarpov, I.
登録日2002-03-26
公開日2003-03-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Comparison of different crystal forms of 3-dehydroquinase from Salmonella typhi and its implication for the enzyme activity.
Acta Crystallogr.,Sect.D, 58, 2002
5KST
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BU of 5kst by Molmil
Stationary phase Survival protein E (SurE) from Xylella fastidiosa- XfSurE-TSAmp (Tetramer Smaller - crystallization with 3'AMP).
分子名称: 5'-nucleotidase SurE, IODIDE ION, MANGANESE (II) ION, ...
著者Machado, A.T.P, Fonseca, E.M.B, Dos Reis, M.A, Saraiva, A.M, Dos Santos, C.A, De Toledo, M.A.S, Polikarpov, I, De Souza, A.P, Aparicio, R, Iulek, J.
登録日2016-07-09
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.759 Å)
主引用文献Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.
Proteins, 85, 2017
1GMZ
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BU of 1gmz by Molmil
Crystal structure of the D49 phospholipase A2 piratoxin III from Bothrops pirajai.
分子名称: ISOPROPYL ALCOHOL, PHOSPHOLIPASE A2
著者Rigden, D.J, Lee, W.H, Polikarpov, I.
登録日2001-09-27
公開日2001-11-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Structure of the D49 Phospholipase A2 Piratoxin III from Bothrops Pirajai Reveals Unprecedented Structural Displacement of the Calcium-Binding Loop: Possible Relationship to Cooperative Substrate Binding
Acta Crystallogr.,Sect.D, 59, 2003
1GQN
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BU of 1gqn by Molmil
Native 3-dehydroquinase from Salmonella typhi
分子名称: 3-DEHYDROQUINATE DEHYDRATASE
著者Lee, W.-H, Perles, L.A, Nagem, R.A.P, Polikarpov, I, Sawyer, L.
登録日2001-11-26
公開日2003-11-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Comparison of Different Crystal Forms of 3-Dehydroquinase from Salmonella Typhi and its Implications for Enzyme Activity
Acta Crystallogr.,Sect.D, 58, 2002
1HWU
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BU of 1hwu by Molmil
STRUCTURE OF PII PROTEIN FROM HERBASPIRILLUM SEROPEDICAE
分子名称: PII PROTEIN
著者Benelli, E.M, Buck, M, Polikarpov, I, De Souza, E.M, Cruz, L.M, Pedrosa, F.O.
登録日2001-01-10
公開日2003-06-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Herbaspirillum seropedicae signal transduction protein PII is structurally similar to the enteric GlnK.
Eur.J.Biochem., 269, 2002
4CI5
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BU of 4ci5 by Molmil
Structural basis for GL479 a dual Peroxisome Proliferator-Activated Receptor gamma agonist
分子名称: 2-methyl-2-[4-[2-[4-[(E)-phenyldiazenyl]phenoxy]ethyl]phenoxy]propanoic acid, PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
著者Santos, J.C, Bernardes, A, Polikarpov, I.
登録日2013-12-05
公開日2014-12-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Different binding and recognition modes of GL479, a dual agonist of Peroxisome Proliferator-Activated Receptor alpha / gamma.
J. Struct. Biol., 191, 2015
4CI4
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BU of 4ci4 by Molmil
Structural basis for GL479 a dual Peroxisome Proliferator-Activated Receptor alpha agonist
分子名称: 2-methyl-2-[4-[2-[4-[(E)-phenyldiazenyl]phenoxy]ethyl]phenoxy]propanoic acid, PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR ALPHA
著者Santos, J.C, Bernardes, A, Polikarpov, I.
登録日2013-12-05
公開日2014-12-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Different binding and recognition modes of GL479, a dual agonist of Peroxisome Proliferator-Activated Receptor alpha / gamma.
J. Struct. Biol., 191, 2015
4CVU
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BU of 4cvu by Molmil
Structure of Fungal beta-mannosidase from Glycoside Hydrolase Family 2 of Trichoderma harzianum
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-MANNOSIDASE, CADMIUM ION, ...
著者Muniz, J.R.C, Aparicio, R, Santos, J.C, Nascimento, A.S, Golubev, A.M, Polikarpov, I.
登録日2014-03-31
公開日2014-07-09
最終更新日2023-07-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Insights into the structure and function of fungal beta-mannosidases from glycoside hydrolase family 2 based on multiple crystal structures of the Trichoderma harzianum enzyme.
FEBS J., 281, 2014
4DEU
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BU of 4deu by Molmil
Crystal Structure of the Wild Type TTR Binding Naringenin (TTRwt:NAR)
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, NARINGENIN, ...
著者Trivella, D.B.B, Polikarpov, I.
登録日2012-01-22
公開日2012-11-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis.
J.Struct.Biol., 180, 2012
4DES
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BU of 4des by Molmil
Crystal Structure of the Wild Type TTR Binding Chrysin (TTRwt:CHR)
分子名称: Transthyretin, chrysin
著者Trivella, D.B.B, Polikarpov, I.
登録日2012-01-21
公開日2012-11-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis.
J.Struct.Biol., 180, 2012
4DET
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BU of 4det by Molmil
Crystal Structure of the Wild Type TTR Binding Kaempferol (TTRwt:KAE)
分子名称: 3,5,7-TRIHYDROXY-2-(4-HYDROXYPHENYL)-4H-CHROMEN-4-ONE, Transthyretin
著者Trivella, D.B.B, Polikarpov, I.
登録日2012-01-22
公開日2012-11-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis.
J.Struct.Biol., 180, 2012
4DEW
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BU of 4dew by Molmil
Crystal Structure of the Wild Type TTR Binding Luteolin (TTRwt:LUT)
分子名称: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one, Transthyretin
著者Trivella, D.B.B, Polikarpov, I.
登録日2012-01-22
公開日2012-11-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis.
J.Struct.Biol., 180, 2012
4DER
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BU of 4der by Molmil
Crystal Structure of the Wild Type TTR Binding Apigenin (TTRwt:API)
分子名称: 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one, GLYCEROL, Transthyretin
著者Trivella, D.B.B, Polikarpov, I.
登録日2012-01-21
公開日2012-11-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis.
J.Struct.Biol., 180, 2012
4EMA
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BU of 4ema by Molmil
Human peroxisome proliferator-activated receptor gamma in complex with rosiglitazone
分子名称: 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL), Peroxisome proliferator-activated receptor gamma
著者Liberato, M.V, Nascimento, A.S, Polikarpov, I.
登録日2012-04-11
公開日2013-03-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.545 Å)
主引用文献Medium chain fatty acids are selective peroxisome proliferator activated receptor (PPAR) Gamma activators and pan-PPAR partial agonists
Plos One, 7, 2012

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