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6KNA
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BU of 6kna by Molmil
Viral Ubiquitin from Autographa californica Nucleo Polyhedrosis Virus
Descriptor: Viral ubiquitin
Authors:Negi, H, Reddy, P.P, Das, R.
Deposit date:2019-08-05
Release date:2020-06-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A novel polyubiquitin chain linkage formed by viral Ubiquitin is resistant to host deubiquitinating enzymes.
Biochem.J., 477, 2020
5YRA
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BU of 5yra by Molmil
Crystal Structure of Cypovirus Polyhedra R13A/S193C/A194C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-09
Release date:2018-02-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRB
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BU of 5yrb by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/E73C/Y83C/S193C/A194C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-09
Release date:2018-02-21
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRC
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BU of 5yrc by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/E73C/Y83C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-09
Release date:2018-02-21
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YR9
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BU of 5yr9 by Molmil
Crystal Structure of Cypovirus Polyhedra R13A/E73C/Y83C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-08
Release date:2018-02-21
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YR1
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BU of 5yr1 by Molmil
Crystal Structure of Cypovirus Polyhedra R13A/E73C/Y83C/S193C/A194C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-08
Release date:2018-02-21
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRD
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BU of 5yrd by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/S193C/A194C Mutant
Descriptor: 1,2-ETHANEDIOL, Polyhedrin
Authors:Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
Deposit date:2017-11-09
Release date:2018-02-21
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
6IWJ
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BU of 6iwj by Molmil
A designed domain swapped dimer
Descriptor: Archeal Protein MK0293
Authors:Nandwani, N, Negi, H, Das, R.
Deposit date:2018-12-05
Release date:2019-02-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
6JXU
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BU of 6jxu by Molmil
SUMO1 bound to SLS4-SIM peptide from ICP0
Descriptor: Small ubiquitin-related modifier, viral protein
Authors:Hembram, D.S.S, Negi, H, Shet, D, Das, R.
Deposit date:2019-04-25
Release date:2020-02-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.
J.Mol.Biol., 432, 2020
6JXV
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BU of 6jxv by Molmil
SUMO1 bound to phosphorylated SLS4-SIM peptide from ICP0
Descriptor: Phosphorylated SLS4-SIM from ubiquitin E3 ligase ICP0, Small ubiquitin-related modifier
Authors:Hembram, D.S.S, Negi, H, Shet, D, Das, R.
Deposit date:2019-04-25
Release date:2020-02-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.
J.Mol.Biol., 432, 2020
6JXW
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BU of 6jxw by Molmil
Complex of SUMO2 bound SLS4 from ICP0.
Descriptor: SLS4-SIM from Ubiquitin E3 ligase ICP0, Small ubiquitin-related modifier 2
Authors:Hembram, D.S.S, Negi, H, Shet, D, Das, R.
Deposit date:2019-04-25
Release date:2020-02-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.
J.Mol.Biol., 432, 2020
6JXX
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BU of 6jxx by Molmil
SUMO2 bound to phosphorylated SLS4-SIM peptide from ICP0
Descriptor: Phosphorylated SLS4 from E3 ubiquitin ligase ICP0, Small ubiquitin-related modifier 2
Authors:Hembram, D.S.S, Negi, H, Shet, D, Das, R.
Deposit date:2019-04-25
Release date:2020-02-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.
J.Mol.Biol., 432, 2020
5AXV
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BU of 5axv by Molmil
Crystal Structure of Cypovirus Polyhedra R13K Mutant
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Abe, S, Ijiri, H, Negishi, H, Yamanaka, H, Sasaki, K, Hirata, K, Mori, H, Ueno, T.
Deposit date:2015-08-01
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Design of Enzyme-Encapsulated Protein Containers by In Vivo Crystal Engineering
Adv. Mater. Weinheim, 27, 2015
5AXU
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BU of 5axu by Molmil
Crystal Structure of Cypovirus Polyhedra R13A Mutant
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Abe, S, Ijiri, H, Negishi, H, Yamanaka, H, Sasaki, K, Hirata, K, Mori, H, Ueno, T.
Deposit date:2015-08-01
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Design of Enzyme-Encapsulated Protein Containers by In Vivo Crystal Engineering
Adv. Mater. Weinheim, 27, 2015
7E3F
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BU of 7e3f by Molmil
Crystal structure of Trypanosoma brucei cathepsin B Y217C/S275C mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cysteine peptidase C (CPC), beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Abe, S, Pham, T.T, Negishi, H, Yamashita, K, Hirata, K, Ueno, T.
Deposit date:2021-02-08
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Design of an In-Cell Protein Crystal for the Environmentally Responsive Construction of a Supramolecular Filament.
Angew.Chem.Int.Ed.Engl., 60, 2021
7E3G
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BU of 7e3g by Molmil
Crystal structure of Trypanosoma brucei cathepsin B R91C/T223C mutant in the living cell
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cysteine peptidase C (CPC), beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Abe, S, Pham, T.T, Negishi, H, Yamashita, K, Hirata, K, Ueno, T.
Deposit date:2021-02-08
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.86 Å)
Cite:Design of an In-Cell Protein Crystal for the Environmentally Responsive Construction of a Supramolecular Filament.
Angew.Chem.Int.Ed.Engl., 60, 2021
7E3E
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BU of 7e3e by Molmil
Crystal structure of Trypanosoma brucei cathepsin B R91C/T223C mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cysteine peptidase C (CPC), beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Abe, S, Pham, T.T, Negishi, H, Yamashita, K, Hirata, K, Ueno, T.
Deposit date:2021-02-08
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design of an In-Cell Protein Crystal for the Environmentally Responsive Construction of a Supramolecular Filament.
Angew.Chem.Int.Ed.Engl., 60, 2021
5YCW
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BU of 5ycw by Molmil
Double domain swapped dimer of engineered hairpin loop1 and loop3 mutant in Single-chain Monellin
Descriptor: single chain monellin
Authors:Surana, P, Nandwani, N, Udgaonkar, J.B, Gosavi, S, Das, R.
Deposit date:2017-09-08
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.285 Å)
Cite:A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
5YCU
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BU of 5ycu by Molmil
Domain swapped dimer of engineered hairpin loop1 mutant in Single-chain Monellin
Descriptor: Single chain monellin
Authors:Surana, P, Nandwani, N, Udgaonkar, J.B, Gosavi, S, Das, R.
Deposit date:2017-09-08
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
5YCT
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BU of 5yct by Molmil
Engineered hairpin loop3 mutant monomer in Single-chain Monellin
Descriptor: Single chain Monellin
Authors:Surana, P, Nandwani, N, Udgaonkar, J.B, Gosavi, S, Das, R.
Deposit date:2017-09-08
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
4YN5
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BU of 4yn5 by Molmil
Catalytic domain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase
Descriptor: CACODYLATE ION, Mannan endo-1,4-beta-mannosidase
Authors:Shimane, Y, Ohta, Y, Usami, R, Hatada, Y.
Deposit date:2015-03-09
Release date:2016-03-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase
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PDB entries from 2024-07-10

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