3ALP
| Cell adhesion protein | 分子名称: | CITRIC ACID, HEXANE-1,6-DIOL, Poliovirus receptor-related protein 1 | 著者 | Narita, H, Nakagawa, A, Suzuki, M. | 登録日 | 2010-08-05 | 公開日 | 2011-02-16 | 最終更新日 | 2017-10-11 | 実験手法 | X-RAY DIFFRACTION (2.804 Å) | 主引用文献 | Crystal Structure of the cis-Dimer of Nectin-1: implications for the architecture of cell-cell junctions J.Biol.Chem., 286, 2011
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7WJT
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5B22
| Dimer structure of murine Nectin-3 D1D2 | 分子名称: | Nectin-3, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 著者 | Takebe, K, Sangawa, T, Katsutani, T, Narita, H, Suzuki, M. | 登録日 | 2015-12-28 | 公開日 | 2016-12-28 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.58 Å) | 主引用文献 | Dimer structure of murine Nectin-3 D1D2 To Be Published
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1DHY
| KKS102 BPHC ENZYME | 分子名称: | 2,3-DIHYDROXYBIPHENYL 1,2-DIOXYGENASE, FE (III) ION | 著者 | Senda, T, Sugiyama, K, Narita, H, Mitsui, Y. | 登録日 | 1995-07-07 | 公開日 | 1995-10-15 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Three-dimensional structures of free form and two substrate complexes of an extradiol ring-cleavage type dioxygenase, the BphC enzyme from Pseudomonas sp. strain KKS102. J.Mol.Biol., 255, 1996
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3VQF
| Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein | 分子名称: | E3 ubiquitin-protein ligase LNX | 著者 | Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H. | 登録日 | 2012-03-22 | 公開日 | 2013-03-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.199 Å) | 主引用文献 | Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase To be Published
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3VQG
| Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein | 分子名称: | C-terminal peptide from Immunoglobulin superfamily member 5, E3 ubiquitin-protein ligase LNX, SULFATE ION | 著者 | Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H. | 登録日 | 2012-03-23 | 公開日 | 2013-03-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | 主引用文献 | Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase To be Published
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3AXA
| Crystal structure of afadin PDZ domain in complex with the C-terminal peptide from nectin-3 | 分子名称: | Afadin, Nectin-3 | 著者 | Fujiwara, Y, Goda, N, Narita, H, Satomura, K, Nakagawa, A, Sakisaka, T, Suzuki, M, Hiroaki, H. | 登録日 | 2011-03-31 | 公開日 | 2012-04-25 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.78 Å) | 主引用文献 | Crystal structure of afadin PDZ domain-nectin-3 complex shows the structural plasticity of the ligand-binding site. Protein Sci., 24, 2015
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1V6Q
| Crystal Structures of Collagen Model Peptides with Pro-Hyp-Gly Sequence at 1.3 A | 分子名称: | Collagen like peptide | 著者 | Okuyama, K, Hongo, C, Fukushima, R, Wu, G, Narita, H, Noguchi, K, Tanaka, Y, Nishino, N. | 登録日 | 2003-12-03 | 公開日 | 2004-08-03 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.25 Å) | 主引用文献 | Crystal structures of collagen model peptides with Pro-Hyp-Gly repeating sequence at 1.26 A resolution: implications for proline ring puckering Biopolymers, 76, 2004
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1V7H
| Crystal Structures of Collagen Model Peptides with Pro-Hyp-Gly Sequence at 1.26 A | 分子名称: | Collagen like peptide | 著者 | Okuyama, K, Hongo, C, Fukushima, R, Wu, G, Narita, H, Noguchi, K, Tanaka, Y, Nishino, N. | 登録日 | 2003-12-17 | 公開日 | 2004-08-03 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.25 Å) | 主引用文献 | Crystal structures of collagen model peptides with Pro-Hyp-Gly repeating sequence at 1.26 A resolution: implications for proline ring puckering Biopolymers, 76, 2004
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3WKV
| Voltage-gated proton channel: VSOP/Hv1 chimeric channel | 分子名称: | Ion channel | 著者 | Takeshita, K, Sakata, S, Yamashita, E, Fujiwara, Y, Kawanabe, A, Kurokawa, T, Okochi, Y, Matsuda, M, Narita, H, Okamura, Y, Nakagawa, A. | 登録日 | 2013-10-31 | 公開日 | 2014-03-05 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (3.453 Å) | 主引用文献 | X-ray crystal structure of voltage-gated proton channel. Nat.Struct.Mol.Biol., 21, 2014
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7DAA
| Crystal structure of basigin complexed with anti-basigin Fab fragment | 分子名称: | CADMIUM ION, Heavy chain of antibody Fab fragment, Isoform 2 of Basigin, ... | 著者 | Sakuragi, T, Kanai, R, Narita, H, Onishi, E, Miyazaki, T, Baba, T, Nakagawa, A, Toyoshima, C, Nagata, S. | 登録日 | 2020-10-16 | 公開日 | 2021-10-20 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.51 Å) | 主引用文献 | The tertiary structure of the human Xkr8-Basigin complex that scrambles phospholipids at plasma membranes. Nat.Struct.Mol.Biol., 28, 2021
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7DCE
| Cryo-EM structure of human XKR8-basigin complex bound to Fab fragment | 分子名称: | 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Heavy chain of Fab fragment, Isoform 2 of Basigin, ... | 著者 | Sakuragi, T, Kanai, R, Tsutsumi, A, Narita, H, Onishi, E, Miyazaki, T, Baba, T, Nakagawa, A, Kikkawa, M, Toyoshima, C, Nagata, S. | 登録日 | 2020-10-26 | 公開日 | 2021-10-20 | 最終更新日 | 2024-01-24 | 実験手法 | ELECTRON MICROSCOPY (3.8 Å) | 主引用文献 | The tertiary structure of the human Xkr8-Basigin complex that scrambles phospholipids at plasma membranes. Nat.Struct.Mol.Biol., 28, 2021
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7D9Z
| Crystal structure of anti-basigin Fab fragment | 分子名称: | 1,2-ETHANEDIOL, CITRATE ANION, Heavy chain of antibody Fab fragment, ... | 著者 | Sakuragi, T, Kanai, R, Narita, H, Onishi, E, Miyazaki, T, Baba, T, Nakagawa, A, Toyoshima, C, Nagata, S. | 登録日 | 2020-10-14 | 公開日 | 2021-10-20 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.123 Å) | 主引用文献 | The tertiary structure of the human Xkr8-Basigin complex that scrambles phospholipids at plasma membranes. Nat.Struct.Mol.Biol., 28, 2021
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3AV4
| Crystal structure of mouse DNA methyltransferase 1 | 分子名称: | DNA (cytosine-5)-methyltransferase 1, ZINC ION | 著者 | Takeshita, K, Suetake, I, Yamashita, E, Suga, M, Narita, H, Nakagawa, A, Tajima, S. | 登録日 | 2011-02-22 | 公開日 | 2011-05-04 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | 主引用文献 | Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1). Proc.Natl.Acad.Sci.USA, 108, 2011
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3AV5
| Crystal structure of mouse DNA methyltransferase 1 with AdoHcy | 分子名称: | DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION | 著者 | Takeshita, K, Suetake, I, Yamashita, E, Suga, M, Narita, H, Nakagawa, A, Tajima, S. | 登録日 | 2011-02-22 | 公開日 | 2011-05-04 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3.25 Å) | 主引用文献 | Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1). Proc.Natl.Acad.Sci.USA, 108, 2011
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3AV6
| Crystal structure of mouse DNA methyltransferase 1 with AdoMet | 分子名称: | DNA (cytosine-5)-methyltransferase 1, S-ADENOSYLMETHIONINE, ZINC ION | 著者 | Takeshita, K, Suetake, I, Yamashita, E, Suga, M, Narita, H, Nakagawa, A, Tajima, S. | 登録日 | 2011-02-22 | 公開日 | 2011-05-04 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3.09 Å) | 主引用文献 | Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1). Proc.Natl.Acad.Sci.USA, 108, 2011
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5X70
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5X6X
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2DRT
| Structure Analysis of (POG)4-LOG-(POG)5 | 分子名称: | ETHANOL, collagen like peptide | 著者 | Okuyama, K. | 登録日 | 2006-06-14 | 公開日 | 2007-04-24 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Unique side chain conformation of a leu residue in a triple-helical structure Biopolymers, 86, 2007
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2DRX
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1V4F
| Crystal structures of collagen model peptides with pro-hyp-gly sequence at 1.3A | 分子名称: | collagen like peptide | 著者 | Okuyama, K, Hongo, C, Fukushima, R, Wu, G, Noguchi, K, Tanaka, Y, Nishino, N. | 登録日 | 2003-11-13 | 公開日 | 2004-08-03 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.26 Å) | 主引用文献 | Crystal structures of collagen model peptides with Pro-Hyp-Gly repeating sequence at 1.26 A resolution: implications for proline ring puckering Biopolymers, 76, 2004
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5X6Z
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5X6Y
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5X71
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3A08
| Structure of (PPG)4-OOG-(PPG)4, monoclinic, twinned crystal | 分子名称: | collagen-like peptide | 著者 | Okuyama, K, Morimoto, T, Wu, G, Noguchi, K, Mizuno, K, Bachinger, H.P. | 登録日 | 2009-03-06 | 公開日 | 2010-01-12 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.22 Å) | 主引用文献 | Two crystal modifications of (Pro-Pro-Gly)4-Hyp-Hyp-Gly-(Pro-Pro-Gly)4 reveal the puckering preference of Hyp(X) in the Hyp(X):Hyp(Y) and Hyp(X):Pro(Y) stacking pairs in collagen helices. Acta Crystallogr.,Sect.D, 66, 2010
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