Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5VMM
DownloadVisualize
BU of 5vmm by Molmil
Staphylococcus aureus IsdB bound to human hemoglobin
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, Iron-regulated cell wall-anchored protein, ...
Authors:Bowden, C.F, Chan, A.C, Murphy, M.E.
Deposit date:2017-04-27
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure-function analyses reveal key features in Staphylococcus aureus IsdB-associated unfolding of the heme-binding pocket of human hemoglobin.
J. Biol. Chem., 293, 2018
6P5T
DownloadVisualize
BU of 6p5t by Molmil
Surface-layer (S-layer) RsaA protein from Caulobacter crescentus bound to strontium and iodide
Descriptor: IODIDE ION, S-layer protein, STRONTIUM ION
Authors:Chan, A.C, Herrmann, J, Smit, J, Wakatsuki, S, Murphy, M.E.
Deposit date:2019-05-30
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A bacterial surface layer protein exploits multistep crystallization for rapid self-assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
2GDR
DownloadVisualize
BU of 2gdr by Molmil
Crystal structure of a bacterial glutathione transferase
Descriptor: GLUTATHIONE, glutathione S-transferase
Authors:Tocheva, E.I, Fortin, P.D, Eltis, L.D, Murphy, M.E.P.
Deposit date:2006-03-16
Release date:2006-08-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of Ternary Complexes of BphK, a Bacterial Glutathione S-Transferase That Reductively Dechlorinates Polychlorinated Biphenyl Metabolites.
J.Biol.Chem., 281, 2006
4TV6
DownloadVisualize
BU of 4tv6 by Molmil
Crystal Structure of Citrate Synthase Variant SbnG E151Q
Descriptor: 2-dehydro-3-deoxyglucarate aldolase, OXALOACETATE ION
Authors:Kobylarz, M.J, Grigg, J.C, Murphy, M.E.P.
Deposit date:2014-06-26
Release date:2014-10-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:SbnG, a Citrate Synthase in Staphylococcus aureus: A NEW FOLD ON AN OLD ENZYME.
J.Biol.Chem., 289, 2014
4TV5
DownloadVisualize
BU of 4tv5 by Molmil
Crystal Structure of Citrate Synthase SbnG
Descriptor: 2-dehydro-3-deoxyglucarate aldolase, CALCIUM ION
Authors:Kobylarz, M.J, Grigg, J.C, Murphy, M.E.P.
Deposit date:2014-06-25
Release date:2014-10-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:SbnG, a Citrate Synthase in Staphylococcus aureus: A NEW FOLD ON AN OLD ENZYME.
J.Biol.Chem., 289, 2014
1VFR
DownloadVisualize
BU of 1vfr by Molmil
THE MAJOR NAD(P)H:FMN OXIDOREDUCTASE FROM VIBRIO FISCHERI
Descriptor: FLAVIN MONONUCLEOTIDE, NAD(P)H:FMN OXIDOREDUCTASE
Authors:Koike, H, Sasaki, H, Kobori, T, Zenno, S, Saigo, K, Murphy, M.E.P, Adman, E.T, Tanokura, M.
Deposit date:1998-01-09
Release date:1999-02-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8 A crystal structure of the major NAD(P)H:FMN oxidoreductase of a bioluminescent bacterium, Vibrio fischeri: overall structure, cofactor and substrate-analog binding, and comparison with related flavoproteins.
J.Mol.Biol., 280, 1998
4U3G
DownloadVisualize
BU of 4u3g by Molmil
Crystal structure of Escherichia coli bacterioferritin mutant D132F
Descriptor: Bacterioferritin, SULFATE ION
Authors:Wong, S.G, Grigg, J.C, Le Brun, N.E, Moore, G.R, Murphy, M.E.P, Mauk, A.G.
Deposit date:2014-07-21
Release date:2014-12-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The B-type Channel Is a Major Route for Iron Entry into the Ferroxidase Center and Central Cavity of Bacterioferritin.
J.Biol.Chem., 290, 2015
1YTC
DownloadVisualize
BU of 1ytc by Molmil
THERMODYNAMIC CYCLES AS PROBES OF STRUCTURE-FUNCTION RELATIONSHIPS IN UNFOLDED PROTEINS
Descriptor: HEME C, SULFATE ION, YEAST ISO-2 CYTOCHROME C
Authors:Luo, Y, Brayer, G.D.
Deposit date:1995-07-03
Release date:1996-03-08
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Thermodynamic cycles as probes of structure in unfolded proteins.
Biochemistry, 35, 1996
1ZDS
DownloadVisualize
BU of 1zds by Molmil
Crystal Structure of Met150Gly AfNiR with Acetamide Bound
Descriptor: ACETAMIDE, COPPER (II) ION, Copper-containing nitrite reductase
Authors:Wijma, H.J, MacPherson, I.S, Alexandre, M, Diederix, R.E.M, Canters, G.W, Murphy, M.E.P, Verbeet, M.P.
Deposit date:2005-04-14
Release date:2006-03-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A rearranging ligand enables allosteric control of catalytic activity in copper-containing nitrite reductase.
J.Mol.Biol., 358, 2006
1ZDQ
DownloadVisualize
BU of 1zdq by Molmil
Crystal Structure of Met150Gly AfNiR with Methylsulfanyl Methane Bound
Descriptor: (METHYLSULFANYL)METHANE, COPPER (II) ION, Copper-containing nitrite reductase
Authors:Wijma, H.J, MacPherson, I.S, Alexandre, M, Diederix, R.E.M, Canters, G.W, Murphy, M.E.P, Verbeet, M.P.
Deposit date:2005-04-14
Release date:2006-03-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A rearranging ligand enables allosteric control of catalytic activity in copper-containing nitrite reductase.
J.Mol.Biol., 358, 2006
5IXG
DownloadVisualize
BU of 5ixg by Molmil
Crystal Structure of Burkholderia cenocepacia BcnB
Descriptor: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, YceI
Authors:Loutet, S.A, Murphy, M.E.P.
Deposit date:2016-03-23
Release date:2017-03-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Antibiotic Capture by Bacterial Lipocalins Uncovers an Extracellular Mechanism of Intrinsic Antibiotic Resistance.
MBio, 8, 2017
5IXH
DownloadVisualize
BU of 5ixh by Molmil
Crystal Structure of Burkholderia cenocepacia BcnA
Descriptor: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, ...
Authors:Loutet, S.A, Murphy, M.E.P.
Deposit date:2016-03-23
Release date:2017-03-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Antibiotic Capture by Bacterial Lipocalins Uncovers an Extracellular Mechanism of Intrinsic Antibiotic Resistance.
MBio, 8, 2017
1D3K
DownloadVisualize
BU of 1d3k by Molmil
HUMAN SERUM TRANSFERRIN
Descriptor: CARBONATE ION, FE (III) ION, SERUM TRANSFERRIN
Authors:Yang, H.-W, MacGillivray, R.T.A, Chen, J, Luo, Y, Wang, Y, Brayer, G.D, Mason, A, Woodworth, R.C, Murphy, M.E.P.
Deposit date:1999-09-29
Release date:2000-03-01
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of two mutants (K206Q, H207E) of the N-lobe of human transferrin with increased affinity for iron.
Protein Sci., 9, 2000
1D4N
DownloadVisualize
BU of 1d4n by Molmil
HUMAN SERUM TRANSFERRIN
Descriptor: CARBONATE ION, FE (III) ION, TRANSFERRIN
Authors:Yang, H.-W, MacGillivray, R.T.A, Chen, J, Luo, Y, Wang, Y, Brayer, G.D, Mason, A, Woodworth, R.C, Murphy, M.E.P.
Deposit date:1999-10-04
Release date:2000-03-01
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of two mutants (K206Q, H207E) of the N-lobe of human transferrin with increased affinity for iron.
Protein Sci., 9, 2000
1ET7
DownloadVisualize
BU of 1et7 by Molmil
CRYSTAL STRUCTURE OF NITRITE REDUCTASE HIS255ASP MUTANT FROM ALCALIGENES FAECALIS S-6
Descriptor: CADMIUM ION, COPPER (II) ION, NITRITE REDUCTASE
Authors:Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P.
Deposit date:2000-04-12
Release date:2000-08-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase.
J.Biol.Chem., 275, 2000
1ET8
DownloadVisualize
BU of 1et8 by Molmil
CRYSTAL STRUCTURE OF NITRITE REDUCTASE HIS255ASN MUTANT FROM ALCALIGENES FAECALIS
Descriptor: COPPER (II) ION, NITRITE REDUCTASE, ZINC ION
Authors:Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P.
Deposit date:2000-04-12
Release date:2000-08-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase.
J.Biol.Chem., 275, 2000
1ET5
DownloadVisualize
BU of 1et5 by Molmil
CRYSTAL STRUCTURE OF NITRITE REDUCTASE ASP98ASN MUTANT FROM ALCALIGENES FAECALIS S-6
Descriptor: COPPER (II) ION, NITRITE REDUCTASE, ZINC ION
Authors:Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P.
Deposit date:2000-04-12
Release date:2000-08-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase.
J.Biol.Chem., 275, 2000
1F5V
DownloadVisualize
BU of 1f5v by Molmil
STRUCTURE AND SITE-DIRECTED MUTAGENESIS OF A FLAVOPROTEIN FROM ESCHERICHIA COLI THAT REDUCES NITROCOMPOUNDS. ALTERATION OF PYRIDINE NUCLEOTIDE BINDING BY A SINGLE AMINO ACID SUBSTITUTION
Descriptor: FLAVIN MONONUCLEOTIDE, OXYGEN-INSENSITIVE NADPH NITROREDUCTASE
Authors:Kobori, T, Sasaki, H, Lee, W.C, Zenno, S, Saigo, K, Murphy, M.E.P, Tanokura, M.
Deposit date:2000-06-17
Release date:2001-02-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and site-directed mutagenesis of a flavoprotein from Escherichia coli that reduces nitrocompounds: alteration of pyridine nucleotide binding by a single amino acid substitution.
J.Biol.Chem., 276, 2001
3H4F
DownloadVisualize
BU of 3h4f by Molmil
Met62Leu variant of nitrite reductase from Alcaligenes faeclis
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase
Authors:MacPherson, I.S, Rosell, F.I, Scofield, M, Mauk, A.G, Murphy, M.E.P.
Deposit date:2009-04-19
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Directed evolution of copper nitrite reductase to a chromogenic reductant.
Protein Eng.Des.Sel., 23, 2010
3H56
DownloadVisualize
BU of 3h56 by Molmil
Met150Leu/Phe312Cys variant of nitrite reductase from Alcaligenes faecalis
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase
Authors:MacPherson, I.S, Rosell, F.I, Scofield, M, Mauk, A.G, Murphy, M.E.P.
Deposit date:2009-04-21
Release date:2010-02-02
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Directed evolution of copper nitrite reductase to a chromogenic reductant.
Protein Eng.Des.Sel., 23, 2010
4ZL6
DownloadVisualize
BU of 4zl6 by Molmil
Crystal structure of the PmFTN variant E44H soaked in iron (3 h)
Descriptor: FE (III) ION, Ferritin
Authors:Pfaffen, S, Murphy, M.E.P.
Deposit date:2015-05-01
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage.
J.Biol.Chem., 290, 2015
4ZL5
DownloadVisualize
BU of 4zl5 by Molmil
Crystal structure of the PmFTN variant E44H soaked in iron (45 min)
Descriptor: FE (III) ION, Ferritin
Authors:Pfaffen, S, Murphy, M.E.P.
Deposit date:2015-05-01
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage.
J.Biol.Chem., 290, 2015
4ZLW
DownloadVisualize
BU of 4zlw by Molmil
Crystal structure of the PmFTN variant E130A soaked in iron (overnight)
Descriptor: FE (III) ION, Ferritin
Authors:Pfaffen, S, Murphy, M.E.P.
Deposit date:2015-05-01
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage.
J.Biol.Chem., 290, 2015
4ZKW
DownloadVisualize
BU of 4zkw by Molmil
Crystal structure of the PmFTN variant E44Q soaked in iron (45 min)
Descriptor: FE (III) ION, Ferritin
Authors:Pfaffen, S, Murphy, M.E.P.
Deposit date:2015-04-30
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage.
J.Biol.Chem., 290, 2015
4ZMC
DownloadVisualize
BU of 4zmc by Molmil
Crystal structure of the PmFTN variant E130A soaked in iron (5 min)
Descriptor: FE (III) ION, Ferritin
Authors:Pfaffen, S, Murphy, M.E.P.
Deposit date:2015-05-02
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage.
J.Biol.Chem., 290, 2015

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon