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5ID3
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BU of 5id3 by Molmil
Solution structure of the pore-forming region of C. elegans Mitochondrial Calcium Uniporter (MCU)
分子名称: Mitochondrial Calcium Uniporter
著者Oxenoid, K, Dong, Y, Cao, C, Cui, T, Sancak, Y, Markhard, A.L, Grabarek, Z, Kong, L, Liu, Z, Ouyang, B, Cong, Y, Mootha, V.K, Chou, J.J, Membrane Protein Structures by Solution NMR (MPSbyNMR)
登録日2016-02-23
公開日2016-05-04
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Architecture of the mitochondrial calcium uniporter.
Nature, 533, 2016
6EAZ
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BU of 6eaz by Molmil
Apo structure of the mitochondrial calcium uniporter protein MICU2
分子名称: Calcium uptake protein 2, mitochondrial, GLYCEROL
著者Kamer, K.J, Grabarek, Z.
登録日2018-08-03
公開日2019-02-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.504 Å)
主引用文献Crystal structure of MICU2 and comparison with MICU1 reveal insights into the uniporter gating mechanism.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5ER0
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BU of 5er0 by Molmil
Water-forming NADH oxidase from Lactobacillus brevis (LbNOX)
分子名称: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, NADH oxidase, ...
著者Cracan, V, Grabarek, Z.
登録日2015-11-13
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.406 Å)
主引用文献Complementation of mitochondrial electron transport chain by manipulation of the NAD+/NADH ratio.
Science, 352, 2016
8OM2
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BU of 8om2 by Molmil
Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.
分子名称: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
著者Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
登録日2023-03-31
公開日2024-01-10
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
8OM4
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BU of 8om4 by Molmil
Small subunit of yeast mitochondrial ribosome.
分子名称: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
著者Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
登録日2023-03-31
公開日2024-01-10
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.32 Å)
主引用文献METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
8OM3
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BU of 8om3 by Molmil
Small subunit of yeast mitochondrial ribosome in complex with IF3/Aim23.
分子名称: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
著者Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
登録日2023-03-31
公開日2024-01-10
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
5VXO
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BU of 5vxo by Molmil
Crystal Structure Analysis of human CLYBL in complex with propionyl-CoA
分子名称: 1,2-ETHANEDIOL, Citrate lyase subunit beta-like protein, mitochondrial, ...
著者Shen, H.
登録日2017-05-23
公開日2017-11-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.266 Å)
主引用文献The Human Knockout Gene CLYBL Connects Itaconate to Vitamin B12.
Cell, 171, 2017
5VXS
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BU of 5vxs by Molmil
Crystal Structure Analysis of human CLYBL in apo form
分子名称: CITRIC ACID, Citrate lyase subunit beta-like protein, mitochondrial
著者Shen, H.
登録日2017-05-24
公開日2017-11-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.954 Å)
主引用文献The Human Knockout Gene CLYBL Connects Itaconate to Vitamin B12.
Cell, 171, 2017
6D80
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BU of 6d80 by Molmil
Cryo-EM structure of the mitochondrial calcium uniporter from N. fischeri bound to saposin
分子名称: CALCIUM ION, Mitochondrial calcium uniporter, Saposin A
著者Nguyen, N.X, Armache, J.-P, Cheng, Y, Bai, X.C.
登録日2018-04-25
公開日2018-07-11
最終更新日2023-02-01
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Cryo-EM structure of a fungal mitochondrial calcium uniporter.
Nature, 559, 2018
6D7W
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BU of 6d7w by Molmil
Cryo-EM structure of the mitochondrial calcium uniporter from N. fischeri at 3.8 Angstrom resolution
分子名称: CALCIUM ION, Mitochondrial calcium uniporter
著者Nguyen, N.X, Armache, J.-P, Cheng, Y, Bai, X.C.
登録日2018-04-25
公開日2018-07-11
最終更新日2023-02-01
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structure of a fungal mitochondrial calcium uniporter.
Nature, 559, 2018
6U08
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BU of 6u08 by Molmil
Double-stranded DNA-specific cytidine deaminase type VI secretion system effector and cognate immunity complex from Burkholderia cenocepacia
分子名称: DddI, Double-stranded DNA-specific cytidine deaminase, ZINC ION
著者Bosch, D.E, de Moraes, M.M.H, Mougous, J.D.
登録日2019-08-13
公開日2020-07-15
最終更新日2020-08-05
実験手法X-RAY DIFFRACTION (2.491 Å)
主引用文献A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial base editing.
Nature, 583, 2020
6OXD
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BU of 6oxd by Molmil
Structure of Mycobacterium tuberculosis methylmalonyl-CoA mutase with adenosyl cobalamin
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Itaconyl coenzyme A, ...
著者Purchal, M, Ruetz, M, Banerjee, R, Koutmos, M.
登録日2019-05-13
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Itaconyl-CoA forms a stable biradical in methylmalonyl-CoA mutase and derails its activity and repair.
Science, 366, 2019
6OXC
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BU of 6oxc by Molmil
Structure of Mycobacterium tuberculosis methylmalonyl-CoA mutase with adenosyl cobalamin
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Methylmalonyl-CoA mutase large subunit, ...
著者Purchal, M, Ruetz, M, Banerjee, R, Koutmos, M.
登録日2019-05-13
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Itaconyl-CoA forms a stable biradical in methylmalonyl-CoA mutase and derails its activity and repair.
Science, 366, 2019
5VOH
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BU of 5voh by Molmil
Crystal structure of engineered water-forming NADPH oxidase (TPNOX) bound to NADPH. The G159A, D177A, A178R, M179S, P184R mutant of LbNOX.
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Cracan, V, Grabarek, Z.
登録日2017-05-02
公開日2017-08-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献A genetically encoded tool for manipulation of NADP(+)/NADPH in living cells.
Nat. Chem. Biol., 13, 2017
5VXC
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BU of 5vxc by Molmil
Crystal Structure Analysis of human CLYBL in complex with free CoASH
分子名称: COENZYME A, Citrate lyase subunit beta-like protein, mitochondrial, ...
著者Shen, H.
登録日2017-05-23
公開日2017-11-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.872 Å)
主引用文献The Human Knockout Gene CLYBL Connects Itaconate to Vitamin B12.
Cell, 171, 2017
5VN0
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BU of 5vn0 by Molmil
Water-forming NADH oxidase from Lactobacillus brevis (LbNOX) bound to NADH.
分子名称: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Cracan, V, Grabarek, Z.
登録日2017-04-28
公開日2017-08-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献A genetically encoded tool for manipulation of NADP(+)/NADPH in living cells.
Nat. Chem. Biol., 13, 2017
6XJX
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BU of 6xjx by Molmil
MCU holocomplex in Low-calcium blocking state
分子名称: Calcium uniporter protein, mitochondrial, Calcium uptake protein 1, ...
著者Wang, Y, Jiang, Y.
登録日2020-06-24
公開日2020-09-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural insights into the Ca 2+ -dependent gating of the human mitochondrial calcium uniporter.
Elife, 9, 2020
6XJV
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BU of 6xjv by Molmil
MCU holocomplex in High-calcium state
分子名称: Calcium uniporter protein, mitochondrial, Calcium uptake protein 1, ...
著者Wang, Y, Jiang, Y.
登録日2020-06-24
公開日2020-09-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.17 Å)
主引用文献Structural insights into the Ca 2+ -dependent gating of the human mitochondrial calcium uniporter.
Elife, 9, 2020
7TH1
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BU of 7th1 by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B3
分子名称: (4S,7S,11R,13E,19S)-N-[2-(2-aminoethoxy)ethyl]-7-benzyl-4-[(3-methylphenyl)methyl]-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-octadecahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosine-19-carboxamide, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Thakur, M.K, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-10
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022
7THF
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BU of 7thf by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B53
分子名称: 3-(4'-{[(4S,7S,11R,13E,19S)-19-{[2-(2-aminoethoxy)ethyl]carbamoyl}-7-benzyl-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-octadecahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosin-4-yl]methyl}[1,1'-biphenyl]-4-yl)pentanedioic acid, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Thakur, M.K, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-10
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022
7TGV
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BU of 7tgv by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B2
分子名称: (4S,7S,11R,13E,19S)-N-[2-(2-aminoethoxy)ethyl]-7-benzyl-4-[([1,1'-biphenyl]-4-yl)methyl]-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-octadecahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosine-19-carboxamide, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Thakur, M.K, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-09
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022
7TGS
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BU of 7tgs by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor JOMBt
分子名称: (4S,7R,11S,13E,19S)-N-[2-(2-aminoethoxy)ethyl]-4-[(furan-2-yl)methyl]-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-octadecahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosine-19-carboxamide, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-09
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022
7TH7
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BU of 7th7 by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B23
分子名称: 3-(4'-{[(4S,7S,11R,19S)-19-{[2-(2-aminoethoxy)ethyl]carbamoyl}-7-benzyl-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,13,14,15,16,17,18,19,20,21,22-icosahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosin-4-yl]methyl}[1,1'-biphenyl]-4-yl)propanoic acid, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Thakur, M.K, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-10
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022
7TGU
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BU of 7tgu by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B1
分子名称: (4S,7S,11R,13E,19S)-N-[2-(2-aminoethoxy)ethyl]-4-[(4-benzoylphenyl)methyl]-7-benzyl-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-octadecahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosine-19-carboxamide, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Thakur, M.K, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-09
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022
7THC
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BU of 7thc by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B25
分子名称: 3-(4'-{[(4S,7S,11R,13E,19S)-19-{[2-(2-aminoethoxy)ethyl]carbamoyl}-7-benzyl-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-octadecahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosin-4-yl]methyl}[1,1'-biphenyl]-4-yl)prop-2-ynoic acid, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Thakur, M.K, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-10
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022

 

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