Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2D2F
DownloadVisualize
BU of 2d2f by Molmil
Crystal structure of atypical cytoplasmic ABC-ATPase SufC from Thermus thermophilus HB8
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Watanabe, S, Kita, A, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-09-08
Release date:2005-10-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Atypical Cytoplasmic ABC-ATPase SufC from Thermus thermophilus HB8.
J.Mol.Biol., 353, 2005
2D2E
DownloadVisualize
BU of 2d2e by Molmil
Crystal structure of atypical cytoplasmic ABC-ATPase SufC from Thermus thermophilus HB8
Descriptor: CHLORIDE ION, GLYCEROL, SufC protein
Authors:Watanabe, S, Kita, A, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-09-08
Release date:2005-10-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Atypical Cytoplasmic ABC-ATPase SufC from Thermus thermophilus HB8.
J.Mol.Biol., 353, 2005
2DKC
DownloadVisualize
BU of 2dkc by Molmil
Crystal structure of N-acetylglucosamine-phosphate mutase, a member of the alpha-D-phosphohexomutase superfamily, in the substrate complex
Descriptor: 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, PHOSPHATE ION, Phosphoacetylglucosamine mutase, ...
Authors:Nishitani, Y, Maruyama, D, Nonaka, T, Kita, A, Fukami, T.A, Mio, T, Yamada-Okabe, H, Yamada-Okabe, T, Miki, K.
Deposit date:2006-04-07
Release date:2006-05-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of N-Acetylglucosamine-phosphate Mutase, a Member of the {alpha}-D-Phosphohexomutase Superfamily, and Its Substrate and Product Complexes.
J.Biol.Chem., 281, 2006
2DT5
DownloadVisualize
BU of 2dt5 by Molmil
Crystal Structure of TTHA1657 (AT-rich DNA-binding protein) from Thermus thermophilus HB8
Descriptor: AT-rich DNA-binding protein, CHLORIDE ION, GLYCEROL, ...
Authors:Nakamura, A, Sosa, A, Komori, H, Kita, A, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-11
Release date:2007-01-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of TTHA1657 (AT-rich DNA-binding protein; p25) from Thermus thermophilus HB8 at 2.16 A resolution
Proteins, 66, 2007
2DKD
DownloadVisualize
BU of 2dkd by Molmil
Crystal structure of N-acetylglucosamine-phosphate mutase, a member of the alpha-D-phosphohexomutase superfamily, in the product complex
Descriptor: 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-galactopyranose, PHOSPHATE ION, Phosphoacetylglucosamine mutase, ...
Authors:Nishitani, Y, Maruyama, D, Nonaka, T, Kita, A, Fukami, T.A, Mio, T, Yamada-Okabe, H, Yamada-Okabe, T, Miki, K.
Deposit date:2006-04-07
Release date:2006-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of N-Acetylglucosamine-phosphate Mutase, a Member of the {alpha}-D-Phosphohexomutase Superfamily, and Its Substrate and Product Complexes.
J.Biol.Chem., 281, 2006
2DKA
DownloadVisualize
BU of 2dka by Molmil
Crystal structure of N-acetylglucosamine-phosphate mutase, a member of the alpha-D-phosphohexomutase superfamily, in the apo-form
Descriptor: Phosphoacetylglucosamine mutase
Authors:Nishitani, Y, Maruyama, D, Nonaka, T, Kita, A, Fukami, T.A, Mio, T, Yamada-Okabe, H, Yamada-Okabe, T, Miki, K.
Deposit date:2006-04-07
Release date:2006-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal Structures of N-Acetylglucosamine-phosphate Mutase, a Member of the {alpha}-D-Phosphohexomutase Superfamily, and Its Substrate and Product Complexes.
J.Biol.Chem., 281, 2006
2E0I
DownloadVisualize
BU of 2e0i by Molmil
Crystal structure of archaeal photolyase from Sulfolobus tokodaii with two FAD molecules: Implication of a novel light-harvesting cofactor
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 432aa long hypothetical deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Fujihashi, M, Numoto, N, Kobayashi, Y, Mizushima, A, Tsujimura, M, Nakamura, A, Kawarabayashi, Y, Miki, K.
Deposit date:2006-10-10
Release date:2006-11-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Archaeal Photolyase from Sulfolobus tokodaii with Two FAD Molecules: Implication of a Novel Light-harvesting Cofactor
J.Mol.Biol., 365, 2007
2E6B
DownloadVisualize
BU of 2e6b by Molmil
Crystal structure of the stationary phase survival protein SurE from Thermus thermophilus HB8 in complex with magnesium and tungstate
Descriptor: 5'-nucleotidase surE, GLYCEROL, MAGNESIUM ION, ...
Authors:Iwasaki, W, Miki, K.
Deposit date:2006-12-26
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP
J.Mol.Biol., 371, 2007
2ED4
DownloadVisualize
BU of 2ed4 by Molmil
Crystal structure of flavin reductase HpaC complexed with FAD and NAD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, flavin reductase (HpaC) of 4-hydroxyphenylacetate 3-monooxygenae
Authors:Kim, S.H, Hisano, T, Iwasaki, W, Ebihara, A, Miki, K.
Deposit date:2007-02-14
Release date:2008-01-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity
Proteins, 70, 2008
2E69
DownloadVisualize
BU of 2e69 by Molmil
Crystal structure of the stationary phase survival protein SurE from Thermus thermophilus HB8 in complex with sulfate
Descriptor: 5'-nucleotidase surE, GLYCEROL, SULFATE ION
Authors:Iwasaki, W, Miki, K.
Deposit date:2006-12-26
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP
J.Mol.Biol., 371, 2007
2E6E
DownloadVisualize
BU of 2e6e by Molmil
Crystal structure of the stationary phase survival protein SurE from Thermus thermophilus HB8
Descriptor: 5'-nucleotidase surE
Authors:Iwasaki, W, Miki, K.
Deposit date:2006-12-26
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP
J.Mol.Biol., 371, 2007
2E6G
DownloadVisualize
BU of 2e6g by Molmil
Crystal structure of the stationary phase survival protein SurE from Thermus thermophilus HB8 in complex with phosphate
Descriptor: 5'-nucleotidase surE, PHOSPHATE ION
Authors:Iwasaki, W, Miki, K.
Deposit date:2006-12-26
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP
J.Mol.Biol., 371, 2007
2E6C
DownloadVisualize
BU of 2e6c by Molmil
Crystal structure of the stationary phase survival protein SurE from Thermus thermophilus HB8 cocrystallized with manganese and AMP
Descriptor: 5'-nucleotidase surE, GLYCEROL, MANGANESE (II) ION, ...
Authors:Iwasaki, W, Miki, K.
Deposit date:2006-12-26
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP
J.Mol.Biol., 371, 2007
2ECU
DownloadVisualize
BU of 2ecu by Molmil
Crystal structure of flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, DODECAETHYLENE GLYCOL, flavin reductase (HpaC) of 4-hydroxyphenylacetate 3-monooxygnease
Authors:Kim, S.H, Hisano, T, Iwasaki, W, Ebihara, A, Miki, K.
Deposit date:2007-02-14
Release date:2008-01-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity
Proteins, 70, 2008
2E6H
DownloadVisualize
BU of 2e6h by Molmil
Crystal structure of E37A mutant of the stationary phase survival protein SurE from Thermus thermophilus HB8 cocrystallized with manganese and AMP
Descriptor: 5'-nucleotidase surE, GLYCEROL, MANGANESE (II) ION, ...
Authors:Iwasaki, W, Miki, K.
Deposit date:2006-12-26
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP
J.Mol.Biol., 371, 2007
3W2E
DownloadVisualize
BU of 3w2e by Molmil
Crystal structure of oxidation intermediate (20 min) of NADH-cytochrome b5 reductase from pig liver
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
Deposit date:2012-11-28
Release date:2013-07-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
3W2G
DownloadVisualize
BU of 3w2g by Molmil
Crystal structure of fully reduced form of NADH-cytochrome b5 reductase from pig liver
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
Deposit date:2012-11-28
Release date:2013-07-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
3W2F
DownloadVisualize
BU of 3w2f by Molmil
Crystal structure of oxidation intermediate (10 min) of NADH-cytochrome b5 reductase from pig liver
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
Deposit date:2012-11-28
Release date:2013-07-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
3W2H
DownloadVisualize
BU of 3w2h by Molmil
Crystal structure of oxidation intermediate (1min) of NADH-cytochrome b5 reductase from pig liver
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
Deposit date:2012-11-28
Release date:2013-07-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
3W2I
DownloadVisualize
BU of 3w2i by Molmil
Crystal structure of re-oxidized form (60 min) of NADH-cytochrome b5 reductase from pig liver
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
Deposit date:2012-11-28
Release date:2013-07-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
2Z1E
DownloadVisualize
BU of 2z1e by Molmil
Crystal structure of HypE from Thermococcus kodakaraensis (outward form)
Descriptor: Hydrogenase expression/formation protein HypE
Authors:Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K.
Deposit date:2007-05-08
Release date:2007-07-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling
Mol.Cell, 27, 2007
2Z1C
DownloadVisualize
BU of 2z1c by Molmil
Crystal structure of HypC from Thermococcus kodakaraensis KOD1
Descriptor: GLYCEROL, Hydrogenase expression/formation protein HypC, TETRAETHYLENE GLYCOL
Authors:Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K.
Deposit date:2007-05-08
Release date:2007-07-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling
Mol.Cell, 27, 2007
2Z9O
DownloadVisualize
BU of 2z9o by Molmil
Crystal structure of the dimeric form of RepE in complex with the repE operator DNA
Descriptor: DNA (33-MER), Replication initiation protein
Authors:Nakamura, A, Wada, C, Miki, K.
Deposit date:2007-09-21
Release date:2007-11-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Structural basis for regulation of bifunctional roles in replication initiator protein
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ZFO
DownloadVisualize
BU of 2zfo by Molmil
Structure of the partially unliganded met state of 400 kDa hemoglobin: Insights into ligand-induced structural changes of giant hemoglobins
Descriptor: Extracellular giant hemoglobin major globin subunit A1, Extracellular giant hemoglobin major globin subunit A2, Extracellular giant hemoglobin major globin subunit B1, ...
Authors:Numoto, N, Nakagawa, T, Kita, A, Sasayama, Y, Fukumori, Y, Miki, K.
Deposit date:2008-01-08
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the partially unliganded met state of 400 kDa hemoglobin: insights into ligand-induced structural changes of giant hemoglobins
Proteins, 73, 2008
2ZSK
DownloadVisualize
BU of 2zsk by Molmil
Crystal structure of PH1733, an aspartate racemase homologue, from Pyrococcus horikoshii OT3
Descriptor: 226aa long hypothetical aspartate racemase
Authors:Kita, A, Tasaki, S, Yohda, M, Miki, K.
Deposit date:2008-09-12
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of PH1733, an aspartate racemase homologue, from pyrococcus horikoshii OT3
Proteins, 74, 2009

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon