Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4GHH
DownloadVisualize
BU of 4ghh by Molmil
Structure of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-Nitrocatechol at 1.55 Ang resolution
Descriptor: 4-NITROCATECHOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2012-08-07
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for the role of tyrosine 257 of homoprotocatechuate 2,3-dioxygenase in substrate and oxygen activation.
Biochemistry, 51, 2012
4GHE
DownloadVisualize
BU of 4ghe by Molmil
Structure of Y257F variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-nitrocatechol at 1.60 Ang resolution
Descriptor: 4-NITROCATECHOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2012-08-07
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for the role of tyrosine 257 of homoprotocatechuate 2,3-dioxygenase in substrate and oxygen activation.
Biochemistry, 51, 2012
4GHG
DownloadVisualize
BU of 4ghg by Molmil
Structure of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with HPCA at 1.50 Ang resolution
Descriptor: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2012-08-07
Release date:2012-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for the role of tyrosine 257 of homoprotocatechuate 2,3-dioxygenase in substrate and oxygen activation.
Biochemistry, 51, 2012
3MI5
DownloadVisualize
BU of 3mi5 by Molmil
Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Descriptor: BETA-MERCAPTOETHANOL, CATECHOL, CHLORIDE ION, ...
Authors:Purpero, V.M, Lipscomb, J.D.
Deposit date:2010-04-09
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
To be Published
3MI1
DownloadVisualize
BU of 3mi1 by Molmil
Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, FE (III) ION, ...
Authors:Purpero, V.M, Lipscomb, J.D.
Deposit date:2010-04-09
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
To be Published
3MV6
DownloadVisualize
BU of 3mv6 by Molmil
Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Descriptor: 3,4-DIHYDROXYBENZOIC ACID, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Purpero, V.M, Lipscomb, J.D.
Deposit date:2010-05-03
Release date:2011-06-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
To be Published
3MV4
DownloadVisualize
BU of 3mv4 by Molmil
Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Descriptor: BETA-MERCAPTOETHANOL, CARBONATE ION, FE (III) ION, ...
Authors:Purpero, V.M, Lipscomb, J.D.
Deposit date:2010-05-03
Release date:2011-06-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
To be Published
3OJT
DownloadVisualize
BU of 3ojt by Molmil
Structure of native Fe-containing Homoprotocatechuate 2,3-Dioxygenase at 1.70 Ang resolution
Descriptor: CALCIUM ION, CHLORIDE ION, FE (II) ION, ...
Authors:Fielding, A.J, Kovaleva, E.G, Farquhar, E.R, Lipscomb, J.D, Que Jr, L.
Deposit date:2010-08-23
Release date:2010-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A hyperactive cobalt-substituted extradiol-cleaving catechol dioxygenase.
J.Biol.Inorg.Chem., 16, 2011
3OJN
DownloadVisualize
BU of 3ojn by Molmil
Structure of Mn-substituted Homoprotocatechuate 2,3-Dioxygenase at 1.65 Ang resolution
Descriptor: CALCIUM ION, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
Authors:Fielding, A.J, Kovaleva, E.G, Farquhar, E.R, Lipscomb, J.D, Que Jr, L.
Deposit date:2010-08-23
Release date:2010-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A hyperactive cobalt-substituted extradiol-cleaving catechol dioxygenase.
J.Biol.Inorg.Chem., 16, 2011
4JO0
DownloadVisualize
BU of 4jo0 by Molmil
Crystal Structure of CmlA, a diiron beta-hydroxylase from Streptomyces venezuelae
Descriptor: ACETATE ION, CmlA, FE (III) ION, ...
Authors:Knoot, C.J, Makris, T.M, Wilmot, C.M, Lipscomb, J.D.
Deposit date:2013-03-16
Release date:2013-09-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure of a Dinuclear Iron Cluster-Containing beta-Hydroxylase Active in Antibiotic Biosynthesis.
Biochemistry, 52, 2013
3OJK
DownloadVisualize
BU of 3ojk by Molmil
Structure of Co-substituted Homoprotocatechuate 2,3-Dioxygenase in complex with 4-nitrocatechol at 1.68 Ang resolution
Descriptor: 4-NITROCATECHOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Fielding, A.J, Kovaleva, E.G, Farquhar, E.R, Lipscomb, J.D, Que Jr, L.
Deposit date:2010-08-23
Release date:2010-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:A hyperactive cobalt-substituted extradiol-cleaving catechol dioxygenase.
J.Biol.Inorg.Chem., 16, 2011
3T63
DownloadVisualize
BU of 3t63 by Molmil
Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Descriptor: BETA-MERCAPTOETHANOL, FE (III) ION, GLYCEROL, ...
Authors:Purpero, V.M, Lipscomb, J.D.
Deposit date:2011-07-28
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
To be Published
3T67
DownloadVisualize
BU of 3t67 by Molmil
Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Descriptor: CATECHOL, FE (III) ION, GLYCEROL, ...
Authors:Purpero, V.M, Lipscomb, J.D.
Deposit date:2011-07-28
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
To be Published
3OJJ
DownloadVisualize
BU of 3ojj by Molmil
Structure of Co-substituted Homoprotocatechuate 2,3-Dioxygenase from B.fuscum at 1.72 Ang resolution
Descriptor: CALCIUM ION, CHLORIDE ION, COBALT (II) ION, ...
Authors:Fielding, A.J, Kovaleva, E.G, Farquhar, E.R, Lipscomb, J.D, Que Jr, L.
Deposit date:2010-08-23
Release date:2010-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:A hyperactive cobalt-substituted extradiol-cleaving catechol dioxygenase.
J.Biol.Inorg.Chem., 16, 2011
2IGA
DownloadVisualize
BU of 2iga by Molmil
Structure of Homoprotocatechuate 2,3-Dioxygenase from B. fuscum in complex with reactive intermediates formed via in crystallo reaction with 4-nitrocatechol at low oxygen concentrations.
Descriptor: (1S)-1-HYDROPEROXY-1-HYDROXY-2-KETO-5-NITROCYCLOHEXA-3,5-DIENE, 1-KETO,2-HYDROXY,4-NITROBENZENE, 1 ELECTRON OXIDIZED, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2006-09-22
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of Fe2+ dioxygenase superoxo, alkylperoxo, and bound product intermediates
Science, 316, 2007
2IG9
DownloadVisualize
BU of 2ig9 by Molmil
Structure of a full-length Homoprotocatechuate 2,3-Dioxygenase from B. fuscum in a new spacegroup.
Descriptor: CALCIUM ION, CHLORIDE ION, FE (II) ION, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2006-09-22
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of Fe2+ dioxygenase superoxo, alkylperoxo, and bound product intermediates
Science, 316, 2007
2MOB
DownloadVisualize
BU of 2mob by Molmil
METHANE MONOOXYGENASE COMPONENT B
Descriptor: PROTEIN (METHANE MONOOXYGENASE REGULATORY PROTEIN B)
Authors:Chang, S.L, Wallar, B.J, Lipscomb, J.D, Mayo, K.H.
Deposit date:1999-03-10
Release date:1999-08-11
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of component B from methane monooxygenase derived through heteronuclear NMR and molecular modeling.
Biochemistry, 38, 1999
5HYG
DownloadVisualize
BU of 5hyg by Molmil
CmlI (peroxo bound state), arylamine oxygenase of chloramphenicol biosynthetic pathway
Descriptor: FE (III) ION, HYDROGEN PEROXIDE, L(+)-TARTARIC ACID, ...
Authors:Knoot, C.J, Lipscomb, J.D.
Deposit date:2016-02-01
Release date:2016-06-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of CmlI, the arylamine oxygenase from the chloramphenicol biosynthetic pathway.
J.Biol.Inorg.Chem., 21, 2016
5HYH
DownloadVisualize
BU of 5hyh by Molmil
CmlI (chemically reduced state), arylamine oxygenase of chloramphenicol biosynthetic pathway
Descriptor: FE (III) ION, L(+)-TARTARIC ACID, Uncharacterized protein
Authors:Knoot, C.J, Lipscomb, J.D.
Deposit date:2016-02-01
Release date:2016-06-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of CmlI, the arylamine oxygenase from the chloramphenicol biosynthetic pathway.
J.Biol.Inorg.Chem., 21, 2016
4WHO
DownloadVisualize
BU of 4who by Molmil
Resting Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 8.5
Descriptor: BETA-MERCAPTOETHANOL, BICARBONATE ION, FE (III) ION, ...
Authors:Knoot, C.J, Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WHQ
DownloadVisualize
BU of 4whq by Molmil
Alkylperoxo reaction intermediate trapped in Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 6.5
Descriptor: (6S)-4-fluoro-6-hydroperoxy-6-hydroxycyclohexa-2,4-dien-1-one, 4-fluorobenzene-1,2-diol, BETA-MERCAPTOETHANOL, ...
Authors:Knoot, C.J, Purpero, V.M, Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WHS
DownloadVisualize
BU of 4whs by Molmil
4-fluorocatechol bound to Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 8.5
Descriptor: 4-fluorobenzene-1,2-diol, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Knoot, C.J, Purpero, V.M, Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WHP
DownloadVisualize
BU of 4whp by Molmil
Resting Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 6.5
Descriptor: BETA-MERCAPTOETHANOL, BICARBONATE ION, FE (III) ION, ...
Authors:Knoot, C.J, Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.541 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WHR
DownloadVisualize
BU of 4whr by Molmil
Anhydride reaction intermediate trapped in Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 8.5
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-fluorobenzene-1,2-diol, 4-fluorooxepine-2,7-dione, ...
Authors:Knoot, C.J, Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
7S6Q
DownloadVisualize
BU of 7s6q by Molmil
Complex structure of Methane monooxygenase hydroxylase and regulatory subunit DBL2
Descriptor: 1,2-ETHANEDIOL, BENZOIC ACID, FE (III) ION, ...
Authors:Johns, J.C, Banerjee, R, Semonis, M.M, Shi, K, Aihara, H, Lipscomb, J.D.
Deposit date:2021-09-14
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics.
Biochemistry, 61, 2022

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon