Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2X9L
DownloadVisualize
BU of 2x9l by Molmil
Crystal structure of deacetylase-bog complex in biosynthesis pathway of teicoplanin.
分子名称: N-ACYL GLM PEUDO-TEICOPLANIN DEACETYLASE, ZINC ION, octyl beta-D-glucopyranoside
著者Chan, H.C, Huang, Y.T, Lyu, S.Y, Huang, C.J, Li, Y.S, Liu, Y.C, Chou, C.C, Tsai, M.D, Li, T.L.
登録日2010-03-23
公開日2011-02-09
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.732 Å)
主引用文献Regioselective Deacetylation Based on Teicoplanin-Complexed Orf2 Crystal Structures.
Mol.Biosyst., 7, 2011
2XAD
DownloadVisualize
BU of 2xad by Molmil
Crystal structure of deacetylase-teicoplanin complex in biosynthesis pathway of teicoplanin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose, 8-METHYLNONANOIC ACID, ...
著者Chan, H.C, Huang, Y.T, Lyu, S.Y, Huang, C.J, Li, Y.S, Liu, Y.C, Chou, C.C, Tsai, M.D, Li, T.L.
登録日2010-03-31
公開日2011-03-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Regioselective Deacetylation Based on Teicoplanin-Complexed Orf2 Crystal Structures.
Mol.Biosyst., 7, 2011
7C7P
DownloadVisualize
BU of 7c7p by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with Telaprevir
分子名称: (1S,3aR,6aS)-2-[(2S)-2-({(2S)-2-cyclohexyl-2-[(pyrazin-2-ylcarbonyl)amino]acetyl}amino)-3,3-dimethylbutanoyl]-N-[(2R,3S)-1-(cyclopropylamino)-2-hydroxy-1-oxohexan-3-yl]octahydrocyclopenta[c]pyrrole-1-carboxamide, 3C-like proteinase, CHLORIDE ION
著者Zeng, R, Qiao, J.X, Wang, Y.F, Li, Y.S, Yao, R, Yang, S.Y, Lei, J.
登録日2020-05-26
公開日2020-07-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献SARS-CoV-2 M pro inhibitors with antiviral activity in a transgenic mouse model.
Science, 371, 2021
7COM
DownloadVisualize
BU of 7com by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with Boceprevir (space group P212121)
分子名称: 3C-like proteinase, boceprevir (bound form)
著者Zeng, R, Qiao, J.X, Wang, Y.F, Li, Y.S, Yao, R, Liu, J.M, Zhou, Y.L, Chen, P, Yang, S.Y, Lei, J.
登録日2020-08-04
公開日2020-08-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献SARS-CoV-2 M pro inhibitors with antiviral activity in a transgenic mouse model.
Science, 371, 2021
7D3I
DownloadVisualize
BU of 7d3i by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with MI-23
分子名称: (3~{S},3~{a}~{S},6~{a}~{R})-2-[3-[3,5-bis(fluoranyl)phenyl]propanoyl]-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrole-3-carboxamide, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3C-like proteinase
著者Zeng, R, Li, Y.S, Qiao, J.X, Wang, Y.F, Yang, S.Y, Lei, J.
登録日2020-09-19
公開日2020-10-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.004 Å)
主引用文献SARS-CoV-2 M pro inhibitors with antiviral activity in a transgenic mouse model.
Science, 371, 2021
7EUP
DownloadVisualize
BU of 7eup by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
分子名称: (2S,3R)-2-azanyl-3-phenyl-butanoic acid, Cupin domain-containing protein, FE (III) ION
著者Li, T.L, Li, Y.S, Chen, M.H.
登録日2021-05-18
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.11043429 Å)
主引用文献Structural and Mechanistic Bases for StnK3 and Its Mutant-Mediated Lewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7EUE
DownloadVisualize
BU of 7eue by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
分子名称: 3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID, Cupin domain-containing protein, FE (III) ION
著者Li, T.L, Li, Y.S, Chen, M.H.
登録日2021-05-17
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08757067 Å)
主引用文献Structural and Mechanistic Bases for StnK3 and Its Mutant-Mediated Lewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7EQK
DownloadVisualize
BU of 7eqk by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
分子名称: (E)-3-(1H-indol-3-yl)-2-oxidanyl-but-2-enoic acid, 1-(1~{H}-indol-3-yl)ethanone, Cupin domain-containing protein, ...
著者Li, T.L, Li, Y.S, Chen, M.H.
登録日2021-05-03
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.04001021 Å)
主引用文献Structural and Mechanistic Bases for StnK3 and Its Mutant-Mediated Lewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7EUZ
DownloadVisualize
BU of 7euz by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
分子名称: (2S,3R)-2-azanyl-3-(1H-indol-3-yl)butanoic acid, Cupin domain-containing protein, FE (III) ION, ...
著者Li, T.L, Li, Y.S, Chen, M.H.
登録日2021-05-19
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.91028166 Å)
主引用文献Structural and Mechanistic Bases for StnK3 and Its Mutant-Mediated Lewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7EU6
DownloadVisualize
BU of 7eu6 by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
分子名称: Cupin domain-containing protein, FE (III) ION, PHOSPHITE ION
著者Li, T.L, Li, Y.S, Chen, M.H.
登録日2021-05-16
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.050108 Å)
主引用文献Structural and Mechanistic Bases for StnK3 and Its Mutant-Mediated Lewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7F6X
DownloadVisualize
BU of 7f6x by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
分子名称: 1H-INDOLE-3-CARBALDEHYDE, Cupin domain-containing protein, FE (III) ION, ...
著者Li, T.L, Li, Y.S, Chen, M.H.
登録日2021-06-26
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structural and Mechanistic Bases for StnK3 and Its Mutant-MediatedLewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7DTQ
DownloadVisualize
BU of 7dtq by Molmil
Apo Crystal Structure of Octaketide Synthase from A. arborescens
分子名称: Octaketide synthase 1
著者Li, T.L, Adhikari, K, Li, Y.S.
登録日2021-01-06
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Apo Crystal Structure of Octaketide synthase from Aloe arborescens.
To Be Published
7C8B
DownloadVisualize
BU of 7c8b by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with Z-VAD(OMe)-FMK
分子名称: 3C-like proteinase, CHLORIDE ION, Z-VAD(OMe)-FMK
著者Zeng, R, Qiao, J.X, Wang, Y.F, Li, Y.S, Yao, R, Yang, S.Y, Lei, J.
登録日2020-05-29
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the SARS-CoV-2 main protease in complex with Z-VAD(OMe)-FMK
To Be Published
7CX9
DownloadVisualize
BU of 7cx9 by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with INZ-1
分子名称: 3-iodanyl-1~{H}-indazole-7-carbaldehyde, 3C-like proteinase, CHLORIDE ION, ...
著者Zeng, R, Liu, X.L, Qiao, J.X, Nan, J.S, Wang, Y.F, Li, Y.S, Yang, S.Y, Lei, J.
登録日2020-09-01
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal structure of the SARS-CoV-2 main protease in complex with INZ-1
To Be Published
5AWV
DownloadVisualize
BU of 5awv by Molmil
Crystal structure of glycopeptide hexose oxidase DBV29 complexed with teicoplanin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranuronic acid, 8-METHYLNONANOIC ACID, ...
著者Liu, Y.C, Li, T.L.
登録日2015-07-09
公開日2015-08-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Interception of teicoplanin oxidation intermediates yields new antimicrobial scaffolds.
Nat. Chem. Biol., 7, 2011
7BSR
DownloadVisualize
BU of 7bsr by Molmil
Mandelate oxidase with the 2-Hydroxy-3-oxosuccinic acid
分子名称: (2~{S})-2-oxidanyl-3-oxidanylidene-butanedioic acid, 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, 4-hydroxymandelate oxidase
著者Li, T.L, Lin, K.H.
登録日2020-03-31
公開日2020-07-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.894 Å)
主引用文献Structural and chemical trapping of flavin-oxide intermediates reveals substrate-directed reaction multiplicity.
Protein Sci., 29, 2020
6A19
DownloadVisualize
BU of 6a19 by Molmil
Mandelate oxidase mutant-Y128F with Benzoylformic acid
分子名称: 4-hydroxymandelate oxidase, BENZOYL-FORMIC ACID, FLAVIN MONONUCLEOTIDE
著者Li, T.L, Lin, K.H.
登録日2018-06-06
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The flavin mononucleotide cofactor in alpha-hydroxyacid oxidases exerts its electrophilic/nucleophilic duality in control of the substrate-oxidation level.
Acta Crystallogr D Struct Biol, 75, 2019
6A08
DownloadVisualize
BU of 6a08 by Molmil
The crystal structure of Mandelate oxidase with benzoyl-formic acid
分子名称: 4-hydroxymandelate oxidase, BENZOYL-FORMIC ACID, FLAVIN MONONUCLEOTIDE, ...
著者Li, T.L, Lin, K.H.
登録日2018-06-05
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.547 Å)
主引用文献The flavin mononucleotide cofactor in alpha-hydroxyacid oxidases exerts its electrophilic/nucleophilic duality in control of the substrate-oxidation level.
Acta Crystallogr D Struct Biol, 75, 2019
5ZZR
DownloadVisualize
BU of 5zzr by Molmil
The crystal structure of Mandelate oxidase with (S)-mandelic acid
分子名称: (S)-MANDELIC ACID, 4-hydroxymandelate oxidase, FLAVIN MONONUCLEOTIDE
著者Li, T.L, Lin, K.H.
登録日2018-06-04
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献The flavin mononucleotide cofactor in alpha-hydroxyacid oxidases exerts its electrophilic/nucleophilic duality in control of the substrate-oxidation level.
Acta Crystallogr D Struct Biol, 75, 2019
5ZZP
DownloadVisualize
BU of 5zzp by Molmil
The crystal structure of Mandelate oxidase
分子名称: 4-hydroxymandelate oxidase, FLAVIN MONONUCLEOTIDE
著者Li, T.L, Lin, K.H.
登録日2018-06-04
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献The flavin mononucleotide cofactor in alpha-hydroxyacid oxidases exerts its electrophilic/nucleophilic duality in control of the substrate-oxidation level.
Acta Crystallogr D Struct Biol, 75, 2019
6A0V
DownloadVisualize
BU of 6a0v by Molmil
Mandelate oxidase mutant-Y128F with (S)-mandelic acid
分子名称: (S)-MANDELIC ACID, 4-hydroxymandelate oxidase, FLAVIN MONONUCLEOTIDE
著者Li, T.L, Lin, K.H.
登録日2018-06-06
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献The flavin mononucleotide cofactor in alpha-hydroxyacid oxidases exerts its electrophilic/nucleophilic duality in control of the substrate-oxidation level.
Acta Crystallogr D Struct Biol, 75, 2019
6A13
DownloadVisualize
BU of 6a13 by Molmil
Mandelate oxidase mutant-Y128F
分子名称: 4-hydroxymandelate oxidase, FLAVIN MONONUCLEOTIDE
著者Li, T.L, Lin, K.H.
登録日2018-06-06
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The flavin mononucleotide cofactor in alpha-hydroxyacid oxidases exerts its electrophilic/nucleophilic duality in control of the substrate-oxidation level.
Acta Crystallogr D Struct Biol, 75, 2019
5XT4
DownloadVisualize
BU of 5xt4 by Molmil
Crystal Structure of Transketolase in complex with TPP intermediate VIII' from Pichia Stipitis
分子名称: 2-C-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium-2-yl}-6-O-phosphono-D-glucitol, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Li, T.L, Hsu, N.S, Wang, Y.L.
登録日2017-06-16
公開日2018-06-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Evidence of Diradicals Involved in the Yeast Transketolase Catalyzed Keto-Transferring Reactions.
Chembiochem, 19, 2018
5XU2
DownloadVisualize
BU of 5xu2 by Molmil
Crystal Structure of Transketolase in complex with TPP_III and fructose-6-phosphate from Pichia Stipitis
分子名称: 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2H-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Li, T.L, Hsu, N.S, Wang, Y.L.
登録日2017-06-22
公開日2018-06-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Evidence of Diradicals Involved in the Yeast Transketolase Catalyzed Keto-Transferring Reactions.
Chembiochem, 19, 2018
5XT0
DownloadVisualize
BU of 5xt0 by Molmil
Crystal Structure of Transketolase in complex with TPP intermediate VIII from Pichia Stipitis
分子名称: 2-C-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium-2-yl}-6-O-phosphono-D-glucitol, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Li, T.L, Hsu, N.S, Wang, Y.L.
登録日2017-06-16
公開日2018-06-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Evidence of Diradicals Involved in the Yeast Transketolase Catalyzed Keto-Transferring Reactions.
Chembiochem, 19, 2018

 

123>

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon