1BW7
 
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1TUT
 | | J4/5 Loop from the Candida albicans and Candida dubliniensis Group I Introns | | 分子名称: | 5'-R(*GP*AP*GP*GP*AP*AP*GP*GP*CP*GP*A)-3', 5'-R(*UP*CP*GP*UP*UP*AP*AP*UP*CP*UP*C)-3' | | 著者 | Znosko, B.M, Kennedy, S.D, Wille, P.C, Krugh, T.R, Turner, D.H. | | 登録日 | 2004-06-25 | | 公開日 | 2004-12-28 | | 最終更新日 | 2022-03-02 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural Features and Thermodynamics of the J4/5 Loop from the Candida albicans and Candida dubliniensis Group I Introns.
Biochemistry, 43, 2004
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1XV0
 | | Solution NMR structure of RNA internal loop with three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCGAAGCCG | | 分子名称: | 5'-R(*GP*CP*CP*GP*AP*AP*GP*CP*CP*(P5P)-3', 5'-R(*GP*GP*UP*GP*GP*AP*GP*GP*CP*U)-3' | | 著者 | Chen, G, Znosko, B.M, Kennedy, S.D, Krugh, T.R, Turner, D.H. | | 登録日 | 2004-10-26 | | 公開日 | 2004-11-09 | | 最終更新日 | 2022-03-02 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution Structure of an RNA Internal Loop with Three Consecutive Sheared GA Pairs
Biochemistry, 44, 2005
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1MV2
 | | The tandem, Face-to-Face AP Pairs in 5'(rGGCAPGCCU)2 | | 分子名称: | 5'-R(*GP*GP*CP*AP*(P5P)P*GP*CP*CP*U)-3' | | 著者 | Znosko, B.M, Burkard, M.E, Krugh, T.R, Turner, D.H. | | 登録日 | 2002-09-24 | | 公開日 | 2002-12-18 | | 最終更新日 | 2022-02-23 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Molecular Recognition in Purine-Rich Internal Loops: Thermodynamic, Structural, and Dynamic Consequences of Purine for Adenine Substitutions in 5'(rGGCAAGCCU)2
Biochemistry, 41, 2002
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1MV6
 | | The tandem, Sheared PP Pairs in 5'(rGGCPPGCCU)2 | | 分子名称: | 5'-R(*GP*GP*CP*(P5P)P*(P5P)P*GP*CP*CP*U)-3' | | 著者 | Znosko, B.M, Burkard, M.E, Krugh, T.R, Turner, D.H. | | 登録日 | 2002-09-24 | | 公開日 | 2002-12-18 | | 最終更新日 | 2022-02-23 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Molecular Recognition in Purine-Rich Internal Loops: Thermodynamic, Structural, and Dynamic Consequences of Purine for Adenine Substitutions in 5'(rGGCAAGCCU)2
Biochemistry, 41, 2002
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1MV1
 | | The Tandem, Sheared PA Pairs in 5'(rGGCPAGCCU)2 | | 分子名称: | 5'-R(*GP*GP*CP*(P5P)P*AP*GP*CP*CP*U)-3' | | 著者 | Znosko, B.M, Burkard, M.E, Krugh, T.R, Turner, D.H. | | 登録日 | 2002-09-24 | | 公開日 | 2002-12-18 | | 最終更新日 | 2022-02-23 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Molecular Recognition in Purine-Rich Internal Loops: Thermodynamic, Structural, and Dynamic Consequences of Purine for Adenine Substitutions in 5'(rGGCAAGCCU)2
Biochemistry, 41, 2002
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1EKA
 | | NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2 | | 分子名称: | RNA (5'-R(*GP*AP*GP*UP*GP*CP*UP*C)-3') | | 著者 | Chen, X, McDowell, J.A, Kierzek, R, Krugh, T.R, Turner, D.H. | | 登録日 | 2000-03-07 | | 公開日 | 2000-11-13 | | 最終更新日 | 2022-02-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
Biochemistry, 39, 2000
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1EKD
 | | NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2 | | 分子名称: | RNA (5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3') | | 著者 | Chen, X, McDowell, J.A, Kierzek, R, Krugh, T.R, Turner, D.H. | | 登録日 | 2000-03-07 | | 公開日 | 2000-11-13 | | 最終更新日 | 2022-02-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
Biochemistry, 39, 2000
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1EEK
 | | SOLUTION STRUCTURE OF A NONPOLAR, NON HYDROGEN BONDED BASE PAIR SURROGATE IN DNA. | | 分子名称: | 5'-D(*CP*GP*CP*AP*TP*(DFT)P*GP*TP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*AP*CP*(MBZ)P*AP*TP*GP*CP*G)-3' | | 著者 | Kool, E.T, Krugh, T.R, Guckian, K.M. | | 登録日 | 2000-02-01 | | 公開日 | 2000-02-16 | | 最終更新日 | 2022-02-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution Structure of a Nonpolar, Non-Hydrogen-Bonded Base Pair Surrogate in DNA
J.Am.Chem.Soc., 122, 2000
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1MUV
 | | Sheared A(anti)-A(anti) Base Pairs in a Destabilizing 2x2 Internal Loop: The NMR Structure of 5'(rGGCAAGCCU)2 | | 分子名称: | 5'-R(*GP*GP*CP*AP*AP*GP*CP*CP*U)-3' | | 著者 | Znosko, B.M, Burkard, M.E, Schroeder, S.J, Krugh, T.R, Turner, D.H. | | 登録日 | 2002-09-24 | | 公開日 | 2002-12-18 | | 最終更新日 | 2022-02-23 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Sheared Aanti-Aanti Base Pairs in a Destabilizing 2x2 Internal Loop: The NMR Structure of
5'(rGGCAAGCCU)2
Biochemistry, 41, 2002
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2DD1
 | | Three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCAAAGCCG | | 分子名称: | 5'-R(*GP*CP*CP*GP*AP*AP*AP*CP*CP*(P5P))-3', 5'-R(*GP*GP*UP*GP*GP*AP*GP*GP*CP*U)-3' | | 著者 | Chen, G, Kennedy, S.D, Krugh, T.R, Turner, D.H. | | 登録日 | 2006-01-19 | | 公開日 | 2006-06-13 | | 最終更新日 | 2022-03-09 | | 実験手法 | SOLUTION NMR | | 主引用文献 | An Alternating Sheared AA Pair and Elements of Stability for a Single Sheared Purine-Purine Pair Flanked by Sheared GA Pairs in RNA
Biochemistry, 45, 2006
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2DD3
 | | An alternating sheared AA pair in 5'GGUGAAGGCU/3'PCCGAAGCCG: II. The minor conformation with A6/A5/A16 stack | | 分子名称: | 5'-R(*GP*CP*CP*GP*AP*AP*GP*CP*CP*(P5P))-3', 5'-R(*GP*GP*UP*GP*AP*AP*GP*GP*CP*U)-3' | | 著者 | Chen, G, Kennedy, S.D, Krugh, T.R, Turner, D.H. | | 登録日 | 2006-01-19 | | 公開日 | 2006-06-13 | | 最終更新日 | 2022-03-09 | | 実験手法 | SOLUTION NMR | | 主引用文献 | An Alternating Sheared AA Pair and Elements of Stability for a Single Sheared Purine-Purine Pair Flanked by Sheared GA Pairs in RNA
Biochemistry, 45, 2006
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2DD2
 | | An alternating sheared AA pair in 5'GGUGAAGGCU/3'PCCGAAGCCG: I. The major conformation with A6/A15/A16 stack | | 分子名称: | 5'-R(*GP*CP*CP*GP*AP*AP*GP*CP*CP*(P5P))-3', 5'-R(*GP*GP*UP*GP*AP*AP*GP*GP*CP*U)-3' | | 著者 | Chen, G, Kennedy, S.D, Krugh, T.R, Turner, D.H. | | 登録日 | 2006-01-19 | | 公開日 | 2006-06-13 | | 最終更新日 | 2022-03-09 | | 実験手法 | SOLUTION NMR | | 主引用文献 | An Alternating Sheared AA Pair and Elements of Stability for a Single Sheared Purine-Purine Pair Flanked by Sheared GA Pairs in RNA
Biochemistry, 45, 2006
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1HS3
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1HS8
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1HS1
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1HS2
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1HS4
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1NTT
 | | 5'(dCPCPUPCPCPUPUP)3':(rAGGAGGAAA)5', where P=propynyl | | 分子名称: | 5'-D(*CP*(5PC)P*(PDU)P*(5PC)P*(5PC)P*(PDU)P*(PDU))-3', 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3' | | 著者 | Znosko, B.M, Barnes III, T.W, Krugh, T.R, Turner, D.H. | | 登録日 | 2003-01-30 | | 公開日 | 2003-06-10 | | 最終更新日 | 2021-07-28 | | 実験手法 | SOLUTION NMR | | 主引用文献 | NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines
J.Am.Chem.Soc., 125, 2003
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1NTQ
 | | 5'(dCCUCCUU)3':3'(rAGGAGGAAA)5' | | 分子名称: | 5'-D(*CP*CP*UP*CP*CP*UP*U)-3', 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3' | | 著者 | Znosko, B.M, Barnes III, T.W, Krugh, T.R, Turner, D.H. | | 登録日 | 2003-01-30 | | 公開日 | 2003-06-10 | | 最終更新日 | 2022-02-23 | | 実験手法 | SOLUTION NMR | | 主引用文献 | NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines
J.Am.Chem.Soc., 125, 2003
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1NTS
 | | 5'(dCCPUPCPCPUPUP)3':3'(rAGGAGGAAA)5', where P=propynyl | | 分子名称: | 5'-D(*(5PC)P*(5PC)P*(PDU)P*(5PC)P*(5PC)P*(PDU)P*(PDU))-3', 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3' | | 著者 | Znosko, B.M, Barnes III, T.W, Krugh, T.R, Turner, D.H. | | 登録日 | 2003-01-30 | | 公開日 | 2003-06-10 | | 最終更新日 | 2021-07-28 | | 実験手法 | SOLUTION NMR | | 主引用文献 | NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines
J.Am.Chem.Soc., 125, 2003
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2O81
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2O83
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2H49
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2IRO
 | | The NMR Structures of (rGCUGAGGCU)2 and (rGCGGAUGCU)2 | | 分子名称: | 5'-R(P*GP*CP*GP*GP*AP*UP*GP*CP*U)-3' | | 著者 | Tolbert, B.S. | | 登録日 | 2006-10-16 | | 公開日 | 2007-02-20 | | 最終更新日 | 2022-03-09 | | 実験手法 | SOLUTION NMR | | 主引用文献 | NMR Structures of (rGCUGAGGCU)(2) and (rGCGGAUGCU)(2): Probing the Structural Features That Shape the Thermodynamic Stability of GA Pairs(,).
Biochemistry, 46, 2007
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