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2WBM
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BU of 2wbm by Molmil
Crystal structure of mthSBDS, the homologue of the Shwachman-Bodian- Diamond syndrome protein in the euriarchaeon Methanothermobacter thermautotrophicus
分子名称: CHLORIDE ION, GLYCEROL, RIBOSOME MATURATION PROTEIN SDO1 HOMOLOG, ...
著者Ng, C.L, Isupov, M.N, Lebedev, A.A, Ortiz-Lombardia, M, Antson, A.A.
登録日2009-03-02
公開日2009-06-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Conformational Flexibility and Molecular Interactions of an Archaeal Homologue of the Shwachman-Bodian-Diamond Syndrome Protein.
Bmc Struct.Biol., 9, 2009
8GS2
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BU of 8gs2 by Molmil
Structure of the Cas7-11-Csx29-guide RNA-target RNA (non-matching PFS) complex
分子名称: ADENOSINE-5'-MONOPHOSPHATE, CHAT domain-containing protein, CRISPR-associated RAMP family protein, ...
著者Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H.
登録日2022-09-04
公開日2022-11-09
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Science, 378, 2022
8H2N
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BU of 8h2n by Molmil
gp96 RNA polymerase from P23-45 phage (crystal 2)
分子名称: MAGNESIUM ION, Tape tail measure protein
著者Chaban, A, Sokolova, M.L, Tagami, S.
登録日2022-10-06
公開日2023-10-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (4.41 Å)
主引用文献Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
Nat Commun, 15, 2024
8H2M
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BU of 8h2m by Molmil
gp96 RNA polymerase from P23-45 phage (crystal 1)
分子名称: Tape tail measure protein
著者Chaban, A, Sokolova, M.L, Tagami, S.
登録日2022-10-06
公開日2023-10-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
Nat Commun, 15, 2024
4BF9
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BU of 4bf9 by Molmil
Crystal structure of E. coli dihydrouridine synthase C (DusC) (selenomethionine derivative)
分子名称: FLAVIN MONONUCLEOTIDE, TRNA-DIHYDROURIDINE SYNTHASE C
著者Byrne, R.T, Whelan, F, Konevega, A, Aziz, N, Rodnina, M, Antson, A.A.
登録日2013-03-16
公開日2013-11-06
最終更新日2015-05-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Major Reorientation of tRNA Substrates Defines Specificity of Dihydrouridine Synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
4BFA
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BU of 4bfa by Molmil
Crystal structure of E. coli dihydrouridine synthase C (DusC)
分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, NITRATE ION, ...
著者Byrne, R.T, Whelan, F, Konevega, A, Aziz, N, Rodnina, M, Antson, A.A.
登録日2013-03-16
公開日2013-11-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Major Reorientation of tRNA Substrates Defines Specificity of Dihydrouridine Synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
2I8E
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BU of 2i8e by Molmil
Structure of SSO1404, a predicted DNA repair-associated protein from Sulfolobus solfataricus P2
分子名称: Hypothetical protein, IODIDE ION
著者Wang, S, Zimmerman, M.D, Kudritska, M, Chruszcz, M, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2006-09-01
公開日2006-09-26
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats.
J.Biol.Chem., 283, 2008
3E0J
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BU of 3e0j by Molmil
X-ray structure of the complex of regulatory subunits of human DNA polymerase delta
分子名称: DNA polymerase subunit delta-2, DNA polymerase subunit delta-3
著者Baranovskiy, A.G, Babayeva, N.D, Pavlov, Y.I, Vassylyev, D.G, Tahirov, T.H.
登録日2008-07-31
公開日2008-12-16
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献X-ray structure of the complex of regulatory subunits of human DNA polymerase delta.
Cell Cycle, 7, 2008
8DMB
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BU of 8dmb by Molmil
Structure of Desulfovirgula thermocuniculi IsrB (DtIsrB) in complex with omega RNA and target DNA
分子名称: MAGNESIUM ION, Ubiquitin-like protein SMT3,IsrB protein,monomeric superfolder Green Fluorescent Protein, non-target DNA, ...
著者Seiichi, H, Kappel, K, Zhang, F.
登録日2022-07-08
公開日2022-10-19
最終更新日2022-10-26
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the OMEGA nickase IsrB in complex with omega RNA and target DNA.
Nature, 610, 2022
8F5M
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BU of 8f5m by Molmil
Crystal structure of P74 gp62
分子名称: Envelope glycoprotein gp62, MAGNESIUM ION
著者Bae, B, Nair, S.K.
登録日2022-11-14
公開日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
Nat Commun, 15, 2024
3TEK
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BU of 3tek by Molmil
ThermoDBP: a non-canonical single-stranded DNA binding protein with a novel structure and mechanism
分子名称: ThermoDBP-single stranded DNA binding protein
著者White, M.F, Paytubi, S, Liu, H, Graham, S, McMahon, S.A, Naismith, J.H.
登録日2011-08-15
公開日2011-11-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Displacement of the canonical single-stranded DNA-binding protein in the Thermoproteales.
Proc.Natl.Acad.Sci.USA, 109, 2012
7XHT
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BU of 7xht by Molmil
Structure of the OgeuIscB-omega RNA-target DNA complex
分子名称: DNA (49-MER), DNA (5'-D(P*GP*AP*AP*GP*AP*AP*AP*AP*CP*CP*AP*T)-3'), LAURYL DIMETHYLAMINE-N-OXIDE, ...
著者Kato, K, Okazaki, O, Isayama, Y, Ishikawa, J, Nishizawa, T, Nishimasu, H.
登録日2022-04-10
公開日2022-12-14
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Structure of the IscB-omega RNA ribonucleoprotein complex, the likely ancestor of CRISPR-Cas9.
Nat Commun, 13, 2022
7Y9Y
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BU of 7y9y by Molmil
Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex
分子名称: CHAT domain-containing protein, CRISPR-associated RAMP family protein, RNA (27-MER), ...
著者Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H.
登録日2022-06-26
公開日2022-11-09
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Science, 378, 2022
7Y9X
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BU of 7y9x by Molmil
Structure of the Cas7-11-Csx29-guide RNA complex
分子名称: CHAT domain-containing protein, CRISPR-associated RAMP family protein, ZINC ION, ...
著者Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H.
登録日2022-06-26
公開日2022-11-09
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (2.49 Å)
主引用文献RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Science, 378, 2022
3NKD
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BU of 3nkd by Molmil
Structure of CRISP-associated protein Cas1 from Escherichia coli str. K-12
分子名称: CRISPR-associated protein Cas1
著者Nocek, B, Skarina, T, Beloglazova, N, Savchenko, A, Joachimiak, A, Yakunin, A.
登録日2010-06-18
公開日2010-08-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair.
Mol.Microbiol., 79, 2011
3NKE
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BU of 3nke by Molmil
High resolution structure of the C-terminal domain CRISP-associated protein Cas1 from Escherichia coli str. K-12
分子名称: 1,2-ETHANEDIOL, SULFATE ION, SULFITE ION, ...
著者Nocek, B, Skarina, T, Beloglazova, N, Savchenko, A, Joachimiak, A, Yakunin, A.
登録日2010-06-18
公開日2010-08-25
最終更新日2014-12-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair.
Mol.Microbiol., 79, 2011
1QHK
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BU of 1qhk by Molmil
N-TERMINAL DOMAIN OF SACCHAROMYCES CEREVISIAE RNASE HI REVEALS A FOLD WITH A RESEMBLANCE TO THE N-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN L9
分子名称: PROTEIN (RIBONUCLEASE HI)
著者Evans, S.P, Bycroft, M.
登録日1999-05-17
公開日1999-08-31
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of the N-terminal domain of Saccharomyces cerevisiae RNase HI reveals a fold with a strong resemblance to the N-terminal domain of ribosomal protein L9.
J.Mol.Biol., 291, 1999
1H1J
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BU of 1h1j by Molmil
The SAP domain is a DNA-Binding Domain Capable of Binding S/MAR DNA
分子名称: THO1 PROTEIN
著者Jacobsen, J.O.B, Freund, S.M.V, Bycroft, M.
登録日2002-07-16
公開日2002-08-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Sap Domain is a DNA-Binding Domain Capable of Binding S/Mar DNA
To be Published
1IM4
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BU of 1im4 by Molmil
Crystal Structure of a DinB Homolog (DBH) Lesion Bypass DNA Polymerase Catalytic Fragment from Sulfolobus solfataricus
分子名称: DBH, SULFATE ION
著者Pata, J.D, Zhou, B.L, Steitz, T.A.
登録日2001-05-09
公開日2001-09-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a DinB lesion bypass DNA polymerase catalytic fragment reveals a classic polymerase catalytic domain.
Mol.Cell, 8, 2001
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