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2I8E
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BU of 2i8e by Molmil
Structure of SSO1404, a predicted DNA repair-associated protein from Sulfolobus solfataricus P2
Descriptor: Hypothetical protein, IODIDE ION
Authors:Wang, S, Zimmerman, M.D, Kudritska, M, Chruszcz, M, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-09-01
Release date:2006-09-26
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats.
J.Biol.Chem., 283, 2008
3E0J
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BU of 3e0j by Molmil
X-ray structure of the complex of regulatory subunits of human DNA polymerase delta
Descriptor: DNA polymerase subunit delta-2, DNA polymerase subunit delta-3
Authors:Baranovskiy, A.G, Babayeva, N.D, Pavlov, Y.I, Vassylyev, D.G, Tahirov, T.H.
Deposit date:2008-07-31
Release date:2008-12-16
Last modified:2020-10-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-ray structure of the complex of regulatory subunits of human DNA polymerase delta.
Cell Cycle, 7, 2008
4BF9
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BU of 4bf9 by Molmil
Crystal structure of E. coli dihydrouridine synthase C (DusC) (selenomethionine derivative)
Descriptor: FLAVIN MONONUCLEOTIDE, TRNA-DIHYDROURIDINE SYNTHASE C
Authors:Byrne, R.T, Whelan, F, Konevega, A, Aziz, N, Rodnina, M, Antson, A.A.
Deposit date:2013-03-16
Release date:2013-11-06
Last modified:2015-05-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Major Reorientation of tRNA Substrates Defines Specificity of Dihydrouridine Synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
3TEK
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BU of 3tek by Molmil
ThermoDBP: a non-canonical single-stranded DNA binding protein with a novel structure and mechanism
Descriptor: ThermoDBP-single stranded DNA binding protein
Authors:White, M.F, Paytubi, S, Liu, H, Graham, S, McMahon, S.A, Naismith, J.H.
Deposit date:2011-08-15
Release date:2011-11-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Displacement of the canonical single-stranded DNA-binding protein in the Thermoproteales.
Proc.Natl.Acad.Sci.USA, 109, 2012
4BFA
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BU of 4bfa by Molmil
Crystal structure of E. coli dihydrouridine synthase C (DusC)
Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, NITRATE ION, ...
Authors:Byrne, R.T, Whelan, F, Konevega, A, Aziz, N, Rodnina, M, Antson, A.A.
Deposit date:2013-03-16
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Major Reorientation of tRNA Substrates Defines Specificity of Dihydrouridine Synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
8F5M
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BU of 8f5m by Molmil
Crystal structure of P74 gp62
Descriptor: Envelope glycoprotein gp62, MAGNESIUM ION
Authors:Bae, B, Nair, S.K.
Deposit date:2022-11-14
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
Nat Commun, 15, 2024
8GS2
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BU of 8gs2 by Molmil
Structure of the Cas7-11-Csx29-guide RNA-target RNA (non-matching PFS) complex
Descriptor: ADENOSINE-5'-MONOPHOSPHATE, CHAT domain-containing protein, CRISPR-associated RAMP family protein, ...
Authors:Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H.
Deposit date:2022-09-04
Release date:2022-11-09
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Science, 378, 2022
8H2N
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BU of 8h2n by Molmil
gp96 RNA polymerase from P23-45 phage (crystal 2)
Descriptor: MAGNESIUM ION, Tape tail measure protein
Authors:Chaban, A, Sokolova, M.L, Tagami, S.
Deposit date:2022-10-06
Release date:2023-10-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (4.41 Å)
Cite:Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
Nat Commun, 15, 2024
8H2M
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BU of 8h2m by Molmil
gp96 RNA polymerase from P23-45 phage (crystal 1)
Descriptor: Tape tail measure protein
Authors:Chaban, A, Sokolova, M.L, Tagami, S.
Deposit date:2022-10-06
Release date:2023-10-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
Nat Commun, 15, 2024
4WYH
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BU of 4wyh by Molmil
Crystal structure of PriX from the hyperthermophilic archaeon Sulfolobus solfataricus
Descriptor: IODIDE ION, Uncharacterized protein
Authors:Ouyang, S.
Deposit date:2014-11-17
Release date:2015-06-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A primase subunit essential for efficient primer synthesis by an archaeal eukaryotic-type primase.
Nat Commun, 6, 2015
8DMB
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BU of 8dmb by Molmil
Structure of Desulfovirgula thermocuniculi IsrB (DtIsrB) in complex with omega RNA and target DNA
Descriptor: MAGNESIUM ION, Ubiquitin-like protein SMT3,IsrB protein,monomeric superfolder Green Fluorescent Protein, non-target DNA, ...
Authors:Seiichi, H, Kappel, K, Zhang, F.
Deposit date:2022-07-08
Release date:2022-10-19
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the OMEGA nickase IsrB in complex with omega RNA and target DNA.
Nature, 610, 2022
3NKD
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BU of 3nkd by Molmil
Structure of CRISP-associated protein Cas1 from Escherichia coli str. K-12
Descriptor: CRISPR-associated protein Cas1
Authors:Nocek, B, Skarina, T, Beloglazova, N, Savchenko, A, Joachimiak, A, Yakunin, A.
Deposit date:2010-06-18
Release date:2010-08-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair.
Mol.Microbiol., 79, 2011
3NKE
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BU of 3nke by Molmil
High resolution structure of the C-terminal domain CRISP-associated protein Cas1 from Escherichia coli str. K-12
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, SULFITE ION, ...
Authors:Nocek, B, Skarina, T, Beloglazova, N, Savchenko, A, Joachimiak, A, Yakunin, A.
Deposit date:2010-06-18
Release date:2010-08-25
Last modified:2014-12-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair.
Mol.Microbiol., 79, 2011
7XHT
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BU of 7xht by Molmil
Structure of the OgeuIscB-omega RNA-target DNA complex
Descriptor: DNA (49-MER), DNA (5'-D(P*GP*AP*AP*GP*AP*AP*AP*AP*CP*CP*AP*T)-3'), LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:Kato, K, Okazaki, O, Isayama, Y, Ishikawa, J, Nishizawa, T, Nishimasu, H.
Deposit date:2022-04-10
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Structure of the IscB-omega RNA ribonucleoprotein complex, the likely ancestor of CRISPR-Cas9.
Nat Commun, 13, 2022
7Y9Y
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BU of 7y9y by Molmil
Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex
Descriptor: CHAT domain-containing protein, CRISPR-associated RAMP family protein, RNA (27-MER), ...
Authors:Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H.
Deposit date:2022-06-26
Release date:2022-11-09
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Science, 378, 2022
7Y9X
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BU of 7y9x by Molmil
Structure of the Cas7-11-Csx29-guide RNA complex
Descriptor: CHAT domain-containing protein, CRISPR-associated RAMP family protein, ZINC ION, ...
Authors:Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H.
Deposit date:2022-06-26
Release date:2022-11-09
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Science, 378, 2022
1IM4
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BU of 1im4 by Molmil
Crystal Structure of a DinB Homolog (DBH) Lesion Bypass DNA Polymerase Catalytic Fragment from Sulfolobus solfataricus
Descriptor: DBH, SULFATE ION
Authors:Pata, J.D, Zhou, B.L, Steitz, T.A.
Deposit date:2001-05-09
Release date:2001-09-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a DinB lesion bypass DNA polymerase catalytic fragment reveals a classic polymerase catalytic domain.
Mol.Cell, 8, 2001
1QHK
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BU of 1qhk by Molmil
N-TERMINAL DOMAIN OF SACCHAROMYCES CEREVISIAE RNASE HI REVEALS A FOLD WITH A RESEMBLANCE TO THE N-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN L9
Descriptor: PROTEIN (RIBONUCLEASE HI)
Authors:Evans, S.P, Bycroft, M.
Deposit date:1999-05-17
Release date:1999-08-31
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of the N-terminal domain of Saccharomyces cerevisiae RNase HI reveals a fold with a strong resemblance to the N-terminal domain of ribosomal protein L9.
J.Mol.Biol., 291, 1999
1H1J
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BU of 1h1j by Molmil
The SAP domain is a DNA-Binding Domain Capable of Binding S/MAR DNA
Descriptor: THO1 PROTEIN
Authors:Jacobsen, J.O.B, Freund, S.M.V, Bycroft, M.
Deposit date:2002-07-16
Release date:2002-08-08
Last modified:2018-01-24
Method:SOLUTION NMR
Cite:The Sap Domain is a DNA-Binding Domain Capable of Binding S/Mar DNA
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