5B62
| Crystal structure of N-terminal amidase with Asn-Glu-Ala peptide | Descriptor: | ASN-GLU-ALA, Nta1p | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-01-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (3.042 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5K5U
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5K63
| Crystal structure of N-terminal amidase C187S | Descriptor: | ASPARAGINE, GLYCINE, Nta1p | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-01-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5K60
| Crystal structure of N-terminal amidase with Gln-Val peptide | Descriptor: | GLUTAMINE, Nta1p, VALINE | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-01-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5K66
| Crystal structure of N-terminal amidase with Asn-Glu peptide | Descriptor: | ASPARAGINE, GLUTAMIC ACID, Nta1p | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-01-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.002 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5K62
| Crystal structure of N-terminal amidase C187S | Descriptor: | ASPARAGINE, Nta1p, VALINE | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-01-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.899 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5K5V
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5K61
| Crystal structure of N-terminal amidase with Gln-Gly peptide | Descriptor: | GLUTAMINE, Nta1p | Authors: | Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K. | Deposit date: | 2016-05-24 | Release date: | 2017-04-19 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.001 Å) | Cite: | Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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2B7P
| Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori with phthalic acid | Descriptor: | PHTHALIC ACID, Probable nicotinate-nucleotide pyrophosphorylase, SULFATE ION | Authors: | Kim, M.K, Im, Y.J, Lee, J.H, Eom, S.H. | Deposit date: | 2005-10-05 | Release date: | 2006-02-14 | Last modified: | 2018-09-19 | Method: | X-RAY DIFFRACTION (2.51 Å) | Cite: | Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori Proteins, 63, 2006
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2B7N
| Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori | Descriptor: | Probable nicotinate-nucleotide pyrophosphorylase, QUINOLINIC ACID, SULFATE ION | Authors: | Kim, M.K, Im, Y.J, Lee, J.H, Eom, S.H. | Deposit date: | 2005-10-04 | Release date: | 2006-02-14 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori Proteins, 63, 2006
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2B7Q
| Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori with nicotinate mononucleotide | Descriptor: | NICOTINATE MONONUCLEOTIDE, Probable nicotinate-nucleotide pyrophosphorylase | Authors: | Kim, M.K, Im, Y.J, Lee, J.H, Eom, S.H. | Deposit date: | 2005-10-05 | Release date: | 2006-02-21 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (3.31 Å) | Cite: | Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori Proteins, 63, 2006
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5HYY
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4J4K
| Crystal structure of glucose isomerase | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Xylose isomerase, ... | Authors: | Kim, M.K, An, Y.J, Lee, S, Jeong, C.S, Cha, S.S. | Deposit date: | 2013-02-07 | Release date: | 2014-04-30 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of glucose isomerase To be Published
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7WG4
| DVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-28 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.51 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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7WG2
| EVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-28 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.76 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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7WFX
| EVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-27 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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7WG1
| DVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-27 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (2.19 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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5F1G
| Crystal structure of AmpC BER adenylylated in the cytoplasm | Descriptor: | 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, Beta-lactamase, ... | Authors: | An, Y.J, Kim, M.K, Na, J.H, Cha, S.S. | Deposit date: | 2015-11-30 | Release date: | 2016-12-07 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.76 Å) | Cite: | Structural and mechanistic insights into the inhibition of class C beta-lactamases through the adenylylation of the nucleophilic serine. J.Antimicrob.Chemother., 72, 2017
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5F1F
| Crystal structure of CMY-10 adenylylated by acetyl-AMP | Descriptor: | ADENOSINE MONOPHOSPHATE, Beta-lactamase, CADMIUM ION | Authors: | An, Y.J, Kim, M.K, Na, J.H, Cha, S.S. | Deposit date: | 2015-11-30 | Release date: | 2016-12-07 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.548 Å) | Cite: | Structural and mechanistic insights into the inhibition of class C beta-lactamases through the adenylylation of the nucleophilic serine. J.Antimicrob.Chemother., 72, 2017
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7TM3
| Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon | Descriptor: | 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... | Authors: | Kim, M.K, Lewis, A.J.O, Keenan, R.J, Hegde, R.S. | Deposit date: | 2022-01-19 | Release date: | 2022-10-19 | Last modified: | 2024-06-05 | Method: | ELECTRON MICROSCOPY (3.25 Å) | Cite: | Mechanism of an intramembrane chaperone for multipass membrane proteins. Nature, 611, 2022
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7TUT
| Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon | Descriptor: | 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... | Authors: | Kim, M.K, Lewis, A.J.O, Keenan, R.J, Hegde, R.S. | Deposit date: | 2022-02-03 | Release date: | 2022-10-19 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (3.88 Å) | Cite: | Mechanism of an intramembrane chaperone for multipass membrane proteins. Nature, 611, 2022
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7P80
| Crystal structure of ClpP from Bacillus subtilis in complex with ADEP2 (compressed state) | Descriptor: | ADEP2, ATP-dependent Clp protease proteolytic subunit | Authors: | Lee, B.-G, Kim, L, Kim, M.K, Kwon, D.H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-06-29 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.98 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
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7P81
| Crystal structure of ClpP from Bacillus subtilis in complex with ADEP2 (compact state) | Descriptor: | ADEP2, ATP-dependent Clp protease proteolytic subunit | Authors: | Lee, B.-G, Kim, L, Kim, M.K, Kwon, D.H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-06-29 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.79 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
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2EWT
| Crystal structure of the DNA-binding domain of BldD | Descriptor: | SULFATE ION, putative DNA-binding protein | Authors: | Kim, I.K, Lee, C.J, Kim, M.K, Kim, J.M, Kim, J.H, Yim, H.S, Cha, S.S, Kang, S.O. | Deposit date: | 2005-11-07 | Release date: | 2006-06-13 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.81 Å) | Cite: | Crystal structure of the DNA-binding domain of BldD, a central regulator of aerial mycelium formation in Streptomyces coelicolor A3(2) Mol.Microbiol., 60, 2006
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2ZCU
| Crystal structure of a new type of NADPH-dependent quinone oxidoreductase (QOR2) from escherichia coli | Descriptor: | COPPER (II) ION, Uncharacterized oxidoreductase ytfG | Authors: | Kim, I.K, Yim, H.S, Kim, M.K, Kim, D.W, Kim, Y.M, Cha, S.S, Kang, S.O. | Deposit date: | 2007-11-13 | Release date: | 2008-05-27 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of a new type of NADPH-dependent quinone oxidoreductase (QOR2) from Escherichia coli J.Mol.Biol., 379, 2008
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