7WG4
| DVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-28 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.51 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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7WG2
| EVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-28 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.76 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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7WFX
| EVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-27 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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7WG1
| DVAA-KlAte1 | Descriptor: | Arginyltransferase, ZINC ION | Authors: | Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K. | Deposit date: | 2021-12-27 | Release date: | 2022-09-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (2.19 Å) | Cite: | Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates. Proc.Natl.Acad.Sci.USA, 119, 2022
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6ICO
| Pseudomonas putida CBB5 NdmA with theophylline | Descriptor: | COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICK
| Pseudomonas putida CBB5 NdmA | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.952 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICM
| Pseudomonas putida CBB5 NdmA with ferredoxin domain of NdmD | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.961 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICP
| Pseudomonas putida CBB5 NdmA QL mutant with caffeine | Descriptor: | CAFFEINE, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICN
| Pseudomonas putida CBB5 NdmA with caffeine | Descriptor: | CAFFEINE, COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICL
| Pseudomonas putida CBB5 NdmB | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N3-demethylase NdmB | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICQ
| Pseudomonas putida CBB5 NdmA QL mutant with theobromine | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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7YRB
| UBR box of human UBR6 | Descriptor: | F-box protein 11, isoform CRA_f, SULFATE ION, ... | Authors: | Kim, B, Song, H.K. | Deposit date: | 2022-08-09 | Release date: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.51 Å) | Cite: | Crystal structure of UBR box from human UBR6 To Be Published
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5JST
| MBP fused MDV1 coiled coil | Descriptor: | ACETATE ION, GLYCEROL, Maltose-binding periplasmic protein,Mitochondrial division protein 1, ... | Authors: | Kim, B.-W, Song, H.K. | Deposit date: | 2016-05-09 | Release date: | 2017-03-22 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.199 Å) | Cite: | ACCORD: an assessment tool to determine the orientation of homodimeric coiled-coils. Sci Rep, 7, 2017
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7XZ0
| TRIM E3 ubiquitin ligase | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | Authors: | Park, S.H, Song, H.K. | Deposit date: | 2022-06-02 | Release date: | 2023-07-12 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (3.28 Å) | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane. Nat.Struct.Mol.Biol., 30, 2023
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7XV2
| TRIM E3 ubiquitin ligase | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | Authors: | Park, S.H, Song, H.K. | Deposit date: | 2022-05-20 | Release date: | 2023-05-24 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.75 Å) | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane. Nat.Struct.Mol.Biol., 30, 2023
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7XYZ
| TRIM E3 ubiquitin ligase | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | Authors: | Park, S.H, Song, H.K. | Deposit date: | 2022-06-02 | Release date: | 2023-07-12 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (4.62 Å) | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane. Nat.Struct.Mol.Biol., 30, 2023
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7XZ2
| TRIM E3 ubiquitin ligase | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | Authors: | Park, S.H, Song, H.K. | Deposit date: | 2022-06-02 | Release date: | 2023-07-12 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (3.5 Å) | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane. Nat.Struct.Mol.Biol., 30, 2023
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7XYY
| TRIM E3 ubiquitin ligase WT | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | Authors: | Park, S.H, Song, H.K. | Deposit date: | 2022-06-02 | Release date: | 2023-07-12 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (7.1 Å) | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane. Nat.Struct.Mol.Biol., 30, 2023
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7XZ1
| TRIM E3 ubiquitin ligase | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | Authors: | Park, S.H, Song, H.K. | Deposit date: | 2022-06-02 | Release date: | 2023-07-12 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (5.2 Å) | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane. Nat.Struct.Mol.Biol., 30, 2023
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5YSK
| SdeA mART-C domain EE/AA apo | Descriptor: | Ubiquitinating/deubiquitinating enzyme SdeA | Authors: | Kim, L, Kwon, D.H, Song, H.K. | Deposit date: | 2017-11-14 | Release date: | 2018-08-29 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (2.403 Å) | Cite: | Structural and Biochemical Study of the Mono-ADP-Ribosyltransferase Domain of SdeA, a Ubiquitylating/Deubiquitylating Enzyme from Legionella pneumophila J. Mol. Biol., 430, 2018
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5YSI
| SdeA mART-C domain EE/AA NCA complex | Descriptor: | NICOTINAMIDE, Ubiquitinating/deubiquitinating enzyme SdeA | Authors: | Kim, L, Kwon, D.H, Song, H.K. | Deposit date: | 2017-11-14 | Release date: | 2018-08-29 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (1.546 Å) | Cite: | Structural and Biochemical Study of the Mono-ADP-Ribosyltransferase Domain of SdeA, a Ubiquitylating/Deubiquitylating Enzyme from Legionella pneumophila J. Mol. Biol., 430, 2018
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5YSJ
| SdeA mART-C domain WT apo | Descriptor: | Ubiquitinating/deubiquitinating enzyme SdeA | Authors: | Kim, L, Kwon, D.H, Song, H.K. | Deposit date: | 2017-11-14 | Release date: | 2018-08-29 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.059 Å) | Cite: | Structural and Biochemical Study of the Mono-ADP-Ribosyltransferase Domain of SdeA, a Ubiquitylating/Deubiquitylating Enzyme from Legionella pneumophila J. Mol. Biol., 430, 2018
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5Y2X
| Crystal structure of apo-HaloTag (M175C) | Descriptor: | CHLORIDE ION, Haloalkane dehalogenase | Authors: | Lee, H, Kang, M, Rhee, H, Lee, C. | Deposit date: | 2017-07-27 | Release date: | 2017-09-06 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.02 Å) | Cite: | Structure-guided synthesis of a protein-based fluorescent sensor for alkyl halides Chem. Commun. (Camb.), 53, 2017
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5Y2Y
| Crystal structure of HaloTag (M175C) complexed with dansyl-PEG2-HaloTag ligand | Descriptor: | 5-(dimethylamino)-~{N}-[2-(2-hexoxyethoxy)ethyl]naphthalene-1-sulfonamide, CHLORIDE ION, Haloalkane dehalogenase | Authors: | Lee, H, Kang, M, Rhee, H, Lee, C. | Deposit date: | 2017-07-27 | Release date: | 2017-09-06 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.27 Å) | Cite: | Structure-guided synthesis of a protein-based fluorescent sensor for alkyl halides Chem. Commun. (Camb.), 53, 2017
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