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Molecular basis of egg coat filament cross-linking: Zn-SAD structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
Authors:	Nishimura, K, Jovine, L.
Deposit date:	2018-04-29
Release date:	2019-06-19
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility. Nat Commun, 10, 2019

6GF8

Molecular basis of egg coat filament cross-linking: structure of the glycosylated ZP1 ZP-N1 domain homodimer
Descriptor:	(4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Nishimura, K, Jovine, L.
Deposit date:	2018-04-29
Release date:	2019-06-19
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (3.1 Å)
Cite:	Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility. Nat Commun, 10, 2019

7VTH

The crystal structure of SARS-CoV-2 3CL protease in complex with compound 1
Descriptor:	2-[4-[[4-[bis(fluoranyl)methoxy]-2-methyl-phenyl]amino]-2,6-bis(oxidanylidene)-3-[[3,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazin-1-yl]-N-methyl-ethanamide, 3C-like proteinase
Authors:	Yamamoto, S, Tachibana, Y.
Deposit date:	2021-10-29
Release date:	2022-04-06
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Discovery of S-217622, a Noncovalent Oral SARS-CoV-2 3CL Protease Inhibitor Clinical Candidate for Treating COVID-19. J.Med.Chem., 65, 2022

7VU6

The crystal structure of SARS-CoV-2 3CL protease in complex with compound 3
Descriptor:	3C-like proteinase, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione
Authors:	Yamamoto, S, Yamane, J, Tachibana, Y.
Deposit date:	2021-11-01
Release date:	2022-04-06
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Discovery of S-217622, a Noncovalent Oral SARS-CoV-2 3CL Protease Inhibitor Clinical Candidate for Treating COVID-19. J.Med.Chem., 65, 2022

7XOL

Cryo-EM structure of single empty ring 2 (SER2) of GroEL-UGT1A complex at 3.2 Ang. resolution
Descriptor:	Chaperonin GroEL
Authors:	Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:	2022-05-01
Release date:	2023-05-03
Method:	ELECTRON MICROSCOPY (3.26 Å)
Cite:	Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM To Be Published

7XOS

Cryo-EM structure of occupied ring subunit 4 (OR4) of GroEL from GroEL-UGT1A double occupied ring complex
Descriptor:	Chaperonin GroEL
Authors:	Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:	2022-05-01
Release date:	2023-05-03
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM To Be Published

7XOQ

Cryo-EM structure of occupied ring subunit 2 (OR2) of GroEL from GroEL-UGT1A double occupied ring complex
Descriptor:	Chaperonin GroEL
Authors:	Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:	2022-05-01
Release date:	2023-05-03
Method:	ELECTRON MICROSCOPY (3.3 Å)
Cite:	Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM To Be Published

7XOK

Cryo-EM structure of double occupied ring (DOR) of GroEL-UGT1A complex at 2.7 Ang. resolution
Descriptor:	Chaperonin GroEL
Authors:	Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:	2022-05-01
Release date:	2023-05-03
Method:	ELECTRON MICROSCOPY (2.7 Å)
Cite:	Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM To Be Published

7XOP

Cryo-EM structure of occupied ring subunit 1 (OR1) of GroEL from GroEL-UGT1A double occupied ring complex
Descriptor:	Chaperonin GroEL
Authors:	Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:	2022-05-01
Release date:	2023-05-03
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM To Be Published

7XON

Cryo-EM structure of empty ring subunit 1 (ER1) from single empty ring of GroEL-UGT1A complex
Descriptor:	Chaperonin GroEL
Authors:	Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:	2022-05-01
Release date:	2023-05-03
Method:	ELECTRON MICROSCOPY (3.1 Å)
Cite:	Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM To Be Published

7XOM

Cryo-EM structure of occupied ring subunit 4 (OR4) of GroEL complexed with polyalanine model of UGT1A from GroEL-UGT1A double occupied ring complex
Descriptor:	Chaperonin GroEL, Polyalanine model of UDP-glucuronosyltransferase 1A (UGT1A)
Authors:	Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:	2022-05-01
Release date:	2023-05-03
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM To Be Published

7XOR

Cryo-EM structure of occupied ring subunit 3 (OR3) of GroEL from GroEL-UGT1A double occupied ring complex
Descriptor:	Chaperonin GroEL
Authors:	Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:	2022-05-01
Release date:	2023-05-03
Method:	ELECTRON MICROSCOPY (3.3 Å)
Cite:	Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM To Be Published

7XOJ

Cryo-EM structure of GroEL bound to unfolded substrate (UGT1A) at 2.8 Ang. resolution (Consensus Refinement)
Descriptor:	Chaperonin GroEL
Authors:	Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:	2022-05-01
Release date:	2023-05-03
Method:	ELECTRON MICROSCOPY (2.8 Å)
Cite:	Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM To Be Published

7XOO

Cryo-EM structure of empty ring subunit 2 (ER2) from GroEL-UGT1A single empty ring complex
Descriptor:	Chaperonin GroEL
Authors:	Stapleton, K, Takagi, J, Mizohata, E.
Deposit date:	2022-05-01
Release date:	2023-05-03
Method:	ELECTRON MICROSCOPY (3 Å)
Cite:	Unmasking GroEL: Structure, dynamics, and substrate binding revealed by single-particle cryo-EM To Be Published

7DEH

Solution structure of cecropin P1 in dodecylphosphocholine micelles
Descriptor:	Cecropin-P1
Authors:	Gu, H, Kumeta, H, Aizawa, T.
Deposit date:	2020-11-04
Release date:	2021-11-17
Last modified:	2024-05-15
Method:	SOLUTION NMR
Cite:	Three-Dimensional Structure of the Antimicrobial Peptide Cecropin P1 in Dodecylphosphocholine Micelles and the Role of the C-Terminal Residues Acs Omega, 7, 2022

7VOZ

Solution structure of cecropin P1(1-29) in dodecylphosphocholine micelles
Descriptor:	Cecropin-P1
Authors:	Gu, H, Kumeta, H, Aizawa, T.
Deposit date:	2021-10-15
Release date:	2022-09-21
Last modified:	2024-05-15
Method:	SOLUTION NMR
Cite:	Three-Dimensional Structure of the Antimicrobial Peptide Cecropin P1 in Dodecylphosphocholine Micelles and the Role of the C-Terminal Residues Acs Omega, 7, 2022

7BW2

Crystal Structure of Cyanobacterial PSI Monomer from T.elongatus at 6.5 A Resolution
Descriptor:	Photosystem I 4.8K protein, Photosystem I P700 chlorophyll a apoprotein A1, Photosystem I P700 chlorophyll a apoprotein A2, ...
Authors:	Kurisu, G, Coruh, O, Tanaka, H, Eithar, E.M, Mian, Y.
Deposit date:	2020-04-13
Release date:	2021-03-17
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (6.5 Å)
Cite:	Cryo-EM structure of a functional monomeric Photosystem I from Thermosynechococcus elongatus reveals red chlorophyll cluster. Commun Biol, 4, 2021

7DBN

HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/M184V/F160M:DNA:dCTP ternary complex
Descriptor:	2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA/RNA (38-MER), GLYCEROL, ...
Authors:	Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K.
Deposit date:	2020-10-21
Release date:	2021-08-04
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.67 Å)
Cite:	Biochemical and Structural Properties of Entecavir-Resistant Hepatitis B Virus Polymerase with L180M/M204V Mutations. J.Virol., 95, 2021

7DBM

HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/M184V:DNA:dGTP ternary complex
Descriptor:	2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA/RNA (38-MER), GLYCEROL, ...
Authors:	Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K.
Deposit date:	2020-10-21
Release date:	2021-08-04
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.43 Å)
Cite:	Biochemical and Structural Properties of Entecavir-Resistant Hepatitis B Virus Polymerase with L180M/M204V Mutations. J.Virol., 95, 2021

7XK5

Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, state 3
Descriptor:	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:	Kishikawa, J, Ishikawa, M, Masuya, T, Murai, M, Barquera, B, Miyoshi, H.
Deposit date:	2022-04-19
Release date:	2022-07-20
Last modified:	2022-08-10
Method:	ELECTRON MICROSCOPY (3.1 Å)
Cite:	Cryo-EM structures of Na + -pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae. Nat Commun, 13, 2022

7XK7

Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, with korormicin
Descriptor:	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:	Kishikawa, J, Ishikawa, M, Masuya, T, Murai, M, Barquera, B, Miyoshi, H.
Deposit date:	2022-04-19
Release date:	2022-07-20
Last modified:	2022-08-10
Method:	ELECTRON MICROSCOPY (2.9 Å)
Cite:	Cryo-EM structures of Na + -pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae. Nat Commun, 13, 2022

7XK3

Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, state 1
Descriptor:	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:	Kishikawa, J, Ishikawa, M, Masuya, T, Murai, M, Barquera, B, Miyoshi, H.
Deposit date:	2022-04-19
Release date:	2022-07-20
Last modified:	2022-08-10
Method:	ELECTRON MICROSCOPY (3.1 Å)
Cite:	Cryo-EM structures of Na + -pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae. Nat Commun, 13, 2022

7XK4

Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, state 2
Descriptor:	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:	Kishikawa, J, Ishikawa, M, Masuya, T, Murai, M, Barquera, B, Miyoshi, H.
Deposit date:	2022-04-19
Release date:	2022-07-20
Last modified:	2022-08-10
Method:	ELECTRON MICROSCOPY (3.1 Å)
Cite:	Cryo-EM structures of Na + -pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae. Nat Commun, 13, 2022

7XK6

Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, with aurachin D-42
Descriptor:	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Aurachin D, CALCIUM ION, ...
Authors:	Kishikawa, J, Ishikawa, M, Masuya, T, Murai, M, Barquera, B, Miyoshi, H.
Deposit date:	2022-04-19
Release date:	2022-07-20
Last modified:	2022-08-10
Method:	ELECTRON MICROSCOPY (3 Å)
Cite:	Cryo-EM structures of Na + -pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae. Nat Commun, 13, 2022

3WY2

Crystal structure of alpha-glucosidase in complex with glucose
Descriptor:	Alpha-glucosidase, GLYCEROL, MAGNESIUM ION, ...
Authors:	Shen, X, Gai, Z, Kato, K, Yao, M.
Deposit date:	2014-08-18
Release date:	2015-06-10
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (1.471 Å)
Cite:	Structural analysis of the alpha-glucosidase HaG provides new insights into substrate specificity and catalytic mechanism Acta Crystallogr. D Biol. Crystallogr., 71, 2015

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