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1BVZ
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ALPHA-AMYLASE II (TVAII) FROM THERMOACTINOMYCES VULGARIS R-47
分子名称: PROTEIN (ALPHA-AMYLASE II)
著者Kamitori, S, Kondo, S, Okuyama, K, Yokota, T, Shimura, Y, Tonozuka, T, Sakano, Y.
登録日1998-09-22
公開日1999-03-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVAII) hydrolyzing cyclodextrins and pullulan at 2.6 A resolution.
J.Mol.Biol., 287, 1999
172D
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BU of 172d by Molmil
MULTIPLE BINDING MODES OF ANTICANCER DRUG ACTINOMYCIN D: X-RAY, MOLECULAR MODELING, AND SPECTROSCOPIC STUDIES OF D(GAAGCTTC)2-ACTINOMYCIN D COMPLEXES AND ITS HOST DNA
分子名称: DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
著者Kamitori, S, Takusagawa, F.
登録日1994-04-18
公開日1994-10-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Multiple Binding Modes of Anticancer Drug Actinomycin D: X-Ray, Molecular Modeling, and Spectroscopic Studies of d(GAAGCTTC)2-Actinomycin D Complexes and Its Host DNA
J.Am.Chem.Soc., 116, 1994
173D
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BU of 173d by Molmil
MULTIPLE BINDING MODES OF ANTICANCER DRUG ACTINOMYCIN D: X-RAY, MOLECULAR MODELING, AND SPECTROSCOPIC STUDIES OF D(GAAGCTTC)2-ACTINOMYCIN D COMPLEXES AND ITS HOST DNA
分子名称: ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
著者Kamitori, S, Takusagawa, F.
登録日1994-04-18
公開日1994-10-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Multiple Binding Modes of Anticancer Drug Actinomycin D: X-Ray, Molecular Modeling, and Spectroscopic Studies of D(Gaagcttc)2-Actinomycin D Complexes and its Host DNA
J.Am.Chem.Soc., 116, 1994
8WL9
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BU of 8wl9 by Molmil
X-ray structure of Enterobacter cloacae allose-binding protein in complex with D-ribose
分子名称: Allose ABC transporter, beta-D-ribopyranose
著者Kamitori, S.
登録日2023-09-29
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献X-ray structures of Enterobacter cloacae allose-binding protein in complexes with monosaccharides demonstrate its unique recognition mechanism for high affinity to allose.
Biochem.Biophys.Res.Commun., 682, 2023
8WL7
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BU of 8wl7 by Molmil
X-ray structure of Enterobacter cloacae allose-binding protein in complex with D-allose
分子名称: Allose ABC transporter, beta-D-allopyranose
著者Kamitori, S.
登録日2023-09-29
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献X-ray structures of Enterobacter cloacae allose-binding protein in complexes with monosaccharides demonstrate its unique recognition mechanism for high affinity to allose.
Biochem.Biophys.Res.Commun., 682, 2023
8WL5
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BU of 8wl5 by Molmil
X-ray structure of Enterobacter cloacae allose-binding protein in free form
分子名称: 1,2-ETHANEDIOL, Allose ABC transporter
著者Kamitori, S.
登録日2023-09-29
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献X-ray structures of Enterobacter cloacae allose-binding protein in complexes with monosaccharides demonstrate its unique recognition mechanism for high affinity to allose.
Biochem.Biophys.Res.Commun., 682, 2023
8WLB
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BU of 8wlb by Molmil
X-ray structure of Enterobacter cloacae allose-binding protein in complex with D-psicose
分子名称: Allose ABC transporter, alpha-D-psicopyranose
著者Kamitori, S.
登録日2023-09-29
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献X-ray structures of Enterobacter cloacae allose-binding protein in complexes with monosaccharides demonstrate its unique recognition mechanism for high affinity to allose.
Biochem.Biophys.Res.Commun., 682, 2023
2GS9
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BU of 2gs9 by Molmil
Crystal structure of TT1324 from Thermus thermophilis HB8
分子名称: FORMIC ACID, Hypothetical protein TT1324, S-ADENOSYL-L-HOMOCYSTEINE
著者Kamitori, S, Abe, A, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Agari, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-25
公開日2007-03-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of TT1324 from Thermus thermophilis HB8
To be Published
1JI2
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BU of 1ji2 by Molmil
Improved X-ray Structure of Thermoactinomyces vulgaris R-47 alpha-Amylase 2
分子名称: ALPHA-AMYLASE II, CALCIUM ION
著者Kamitori, S, Abe, A, Ohtaki, A, Kaji, A, Tonozuka, T, Sakano, Y.
登録日2001-06-28
公開日2002-06-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures and structural comparison of Thermoactinomyces vulgaris R-47 alpha-amylase 1 (TVAI) at 1.6 A resolution and alpha-amylase 2 (TVAII) at 2.3 A resolution.
J.Mol.Biol., 318, 2002
1JI1
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BU of 1ji1 by Molmil
Crystal Structure Analysis of Thermoactinomyces vulgaris R-47 alpha-Amylase 1
分子名称: ALPHA-AMYLASE I, CALCIUM ION
著者Kamitori, S, Abe, A, Ohtaki, A, Kaji, A, Tonozuka, T, Sakano, Y.
登録日2001-06-28
公開日2002-06-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures and structural comparison of Thermoactinomyces vulgaris R-47 alpha-amylase 1 (TVAI) at 1.6 A resolution and alpha-amylase 2 (TVAII) at 2.3 A resolution.
J.Mol.Biol., 318, 2002
2EIS
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BU of 2eis by Molmil
X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8
分子名称: COENZYME A, Hypothetical protein TTHB207
著者Kamitori, S, Yoshida, H, Satoh, S, Iino, H, Ebihara, A, Chen, L, Fu, Z.-Q, Chrzas, J, Wang, B.-C, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-13
公開日2008-03-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8
To be Published
1IZE
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BU of 1ize by Molmil
Crystal structure of Aspergillus oryzae Aspartic proteinase complexed with pepstatin
分子名称: Pepstatin, alpha-D-mannopyranose, aspartic proteinase
著者Kamitori, S, Ohtaki, A, Ino, H, Takeuchi, M.
登録日2002-10-02
公開日2003-03-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of Aspergillus oryzae aspartic proteinase and its complex with an inhibitor pepstatin at 1.9A resolution.
J.Mol.Biol., 326, 2003
1IZD
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BU of 1izd by Molmil
Crystal structure of Aspergillus oryzae Aspartic Proteinase
分子名称: Aspartic proteinase, alpha-D-mannopyranose
著者Kamitori, S, Ohtaki, A, Ino, H, Takeuchi, M.
登録日2002-10-02
公開日2003-03-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structures of Aspergillus oryzae Aspartic Proteinase and its Complex with an Inhibitor Pepstatin at 1.9 A Resolution
J.Mol.Biol., 326, 2003
1ZZE
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BU of 1zze by Molmil
X-ray Structure of NADPH-dependent Carbonyl Reductase from Sporobolomyces salmonicolor
分子名称: Aldehyde reductase II, SULFATE ION
著者Kamitori, S, Iguchi, A, Ohtaki, A, Yamada, M, Kita, K.
登録日2005-06-14
公開日2005-09-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray Structures of NADPH-dependent Carbonyl Reductase from Sporobolomyces salmonicolor Provide Insights into Stereoselective Reductions of Carbonyl Compounds
J.Mol.Biol., 352, 2005
1UJM
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BU of 1ujm by Molmil
Crystal structure of aldehyde reductase 2 from Sporobolomyces salmonicolor AKU4429
分子名称: Aldehyde reductase II, SULFATE ION
著者Kamitori, S, Iguchi, A, Ohtaki, A, Kita, K.
登録日2003-08-06
公開日2004-10-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of aldehyde reductase 2 from Sporobolomyces salmonicolor AKU4429 at 2.0 A resolution
To be Published
1Y1P
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BU of 1y1p by Molmil
X-ray structure of aldehyde reductase with NADPH
分子名称: ACETATE ION, ADENOSINE MONOPHOSPHATE, Aldehyde reductase II, ...
著者Kamitori, S, Kita, K.
登録日2004-11-19
公開日2005-09-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray Structures of NADPH-dependent Carbonyl Reductase from Sporobolomyces salmonicolor Provide Insights into Stereoselective Reductions of Carbonyl Compounds
J.Mol.Biol., 352, 2005
7F5I
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BU of 7f5i by Molmil
X-ray structure of Clostridium perfringens-specific amidase endolysin
分子名称: GLUTAMIC ACID, SODIUM ION, ZINC ION, ...
著者Kamitori, S, Tamai, E.
登録日2021-06-22
公開日2022-05-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and biochemical characterization of the Clostridium perfringens-specific Zn 2+ -dependent amidase endolysin, Psa, catalytic domain.
Biochem.Biophys.Res.Commun., 576, 2021
8GSX
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BU of 8gsx by Molmil
X-ray structure of Clostridium perfringens pili protein B collagen-binding domains
分子名称: ACETATE ION, pili protein
著者Kamitori, S, Yamada, M, Tamai, E.
登録日2022-09-07
公開日2023-06-07
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structural and biochemical characterization of Clostridium perfringens pili protein B collagen-binding domains.
Febs Lett., 597, 2023
8GSY
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BU of 8gsy by Molmil
X-ray structure of Clostridium perfringens pili protein B N-terminal domain
分子名称: Peptidoglycan bound protein
著者Kamitori, S, Yamada, M, Tamai, E.
登録日2022-09-07
公開日2023-06-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural and biochemical characterization of Clostridium perfringens pili protein B collagen-binding domains.
Febs Lett., 597, 2023
7WRR
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BU of 7wrr by Molmil
X-ray structure of Thermus thermophilus HB8 transketorase in complex with TPP and MES
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, THIAMINE DIPHOSPHATE, ...
著者Kamitori, S, Yoshihara, A.
登録日2022-01-27
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural and biochemical characterizations of Thermus thermophilus HB8 transketolase producing a heptulose.
Appl.Microbiol.Biotechnol., 107, 2023
7WRT
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BU of 7wrt by Molmil
X-ray structure ofThermus thermophilus HB8 transketorase demonstrate in complex with TPP and D-erythrose-4-phosphate
分子名称: CALCIUM ION, ERYTHOSE-4-PHOSPHATE, THIAMINE DIPHOSPHATE, ...
著者Kamitori, S, Yoshihara, A.
登録日2022-01-27
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and biochemical characterizations of Thermus thermophilus HB8 transketolase producing a heptulose.
Appl.Microbiol.Biotechnol., 107, 2023
5B23
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BU of 5b23 by Molmil
X-ray Structure of Clostridium Perfringens Sortase B
分子名称: Uncharacterized protein Sortase B
著者Kamitori, S, Yoshida, H, Tamai, E.
登録日2015-12-28
公開日2016-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray structure of Clostridium perfringens sortase B cysteine transpeptidase
Biochem. Biophys. Res. Commun., 493, 2017
4KRU
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BU of 4kru by Molmil
X-ray structure of catalytic domain of endolysin from clostridium perfringens phage phiSM101
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Autolytic lysozyme, ...
著者Kamitori, S, Yoshida, H.
登録日2013-05-17
公開日2014-04-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献X-ray structure of a novel endolysin encoded by episomal phage phiSM101 of Clostridium perfringens.
Mol.Microbiol., 92, 2014
4KRT
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X-ray structure of endolysin from clostridium perfringens phage phiSM101
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, Autolytic lysozyme, ...
著者Kamitori, S, Yoshida, H.
登録日2013-05-17
公開日2014-04-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献X-ray structure of a novel endolysin encoded by episomal phage phiSM101 of Clostridium perfringens.
Mol.Microbiol., 92, 2014
5XCC
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BU of 5xcc by Molmil
X-ray structure of Clostridium perfringens pili protein CppA
分子名称: Probable surface protein
著者Kamitori, S, Tamai, E.
登録日2017-03-22
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structures of major pilins in Clostridium perfringens demonstrate dynamic conformational change.
Acta Crystallogr D Struct Biol, 75, 2019

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