Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1A05
DownloadVisualize
BU of 1a05 by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF 3-ISOPROPYLMALATE DEHYDROGENASE FROM THIOBACILLUS FERROOXIDANS WITH 3-ISOPROPYLMALATE
分子名称: 3-ISOPROPYLMALATE DEHYDROGENASE, 3-ISOPROPYLMALIC ACID, MAGNESIUM ION
著者Imada, K, Inagaki, K, Matsunami, H, Kawaguchi, H, Tanaka, H, Tanaka, N, Namba, K.
登録日1997-12-09
公開日1998-06-17
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of 3-isopropylmalate dehydrogenase in complex with 3-isopropylmalate at 2.0 A resolution: the role of Glu88 in the unique substrate-recognition mechanism.
Structure, 6, 1998
5B0O
DownloadVisualize
BU of 5b0o by Molmil
Structure of the FliH-FliI complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Flagellar assembly protein FliH, Flagellum-specific ATP synthase
著者Imada, K, Uchida, Y, Kinoshita, M, Namba, K, Minamino, T.
登録日2015-11-02
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insight into the flagella type III export revealed by the complex structure of the type III ATPase and its regulator
Proc.Natl.Acad.Sci.USA, 113, 2016
1IPD
DownloadVisualize
BU of 1ipd by Molmil
THREE-DIMENSIONAL STRUCTURE OF A HIGHLY THERMOSTABLE ENZYME, 3-ISOPROPYLMALATE DEHYDROGENASE OF THERMUS THERMOPHILUS AT 2.2 ANGSTROMS RESOLUTION
分子名称: 3-ISOPROPYLMALATE DEHYDROGENASE, SULFATE ION
著者Imada, K, Sato, M, Tanaka, N, Katsube, Y, Matsuura, Y, Oshima, T.
登録日1992-01-29
公開日1993-10-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Three-dimensional structure of a highly thermostable enzyme, 3-isopropylmalate dehydrogenase of Thermus thermophilus at 2.2 A resolution.
J.Mol.Biol., 222, 1991
3A7M
DownloadVisualize
BU of 3a7m by Molmil
Structure of FliT, the flagellar type III chaperone for FliD
分子名称: Flagellar protein fliT
著者Imada, K, Minamino, T, Kinoshita, M, Namba, K.
登録日2009-09-29
公開日2010-04-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural insight into the regulatory mechanisms of interactions of the flagellar type III chaperone FliT with its binding partners.
Proc.Natl.Acad.Sci.USA, 107, 2010
2D4V
DownloadVisualize
BU of 2d4v by Molmil
Crystal structure of NAD dependent isocitrate dehydrogenase from Acidithiobacillus thiooxidans
分子名称: CITRATE ANION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, isocitrate dehydrogenase
著者Imada, K, Tamura, T, Namba, K, Inagaki, K.
登録日2005-10-24
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and quantum chemical analysis of NAD+-dependent isocitrate dehydrogenase: hydride transfer and co-factor specificity
Proteins, 70, 2008
2D4W
DownloadVisualize
BU of 2d4w by Molmil
Crystal structure of glycerol kinase from Cellulomonas sp. NT3060
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, glycerol kinase
著者Imada, K, Tamura, T, Namba, K, Inagaki, K.
登録日2005-10-24
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of glycerol kinase from Cellulomonas sp. NT3060
To be Published
2D4Y
DownloadVisualize
BU of 2d4y by Molmil
Crystal structure of a 49K fragment of HAP1 (FlgK)
分子名称: Flagellar hook-associated protein 1
著者Imada, K, Matsunami, H, Samatey, A.F, Nagashima, S, Namba, K.
登録日2005-10-25
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the bacterial flagellar hook-filament junction
To be Published
2D4X
DownloadVisualize
BU of 2d4x by Molmil
Crystal structure of a 26K fragment of HAP3 (FlgL)
分子名称: Flagellar hook-associated protein 3
著者Imada, K, Matsunami, H, Samatey, A.F, Nagashima, S, Namba, K.
登録日2005-10-25
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the bacterial flagellar hook-filament junction
To be Published
2DPY
DownloadVisualize
BU of 2dpy by Molmil
Crystal structure of the flagellar type III ATPase FliI
分子名称: ADENOSINE-5'-DIPHOSPHATE, Flagellum-specific ATP synthase
著者Imada, K, Namba, K, Minamino, T.
登録日2006-05-18
公開日2006-12-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural similarity between the flagellar type III ATPase FliI and F1-ATPase subunits
Proc.Natl.Acad.Sci.Usa, 104, 2007
3AJW
DownloadVisualize
BU of 3ajw by Molmil
Structure of FliJ, a soluble component of flagellar type III export apparatus
分子名称: Flagellar fliJ protein, MERCURY (II) ION
著者Imada, K, Ibuki, T, Minamino, T, Namba, K.
登録日2010-06-23
公開日2011-02-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Common architecture of the flagellar type III protein export apparatus and F- and V-type ATPases
Nat.Struct.Mol.Biol., 18, 2011
3A5I
DownloadVisualize
BU of 3a5i by Molmil
Structure of the cytoplasmic domain of FlhA
分子名称: Flagellar biosynthesis protein flhA
著者Imada, K, Saijo-Hamano, Y, Shimada, M, Namba, K.
登録日2009-08-07
公開日2010-03-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the cytoplasmic domain of FlhA and implication for flagellar type III protein export
Mol.Microbiol., 76, 2010
3AJC
DownloadVisualize
BU of 3ajc by Molmil
Structure of the MC domain of FliG (PEV), a CW-biased mutant
分子名称: Flagellar motor switch protein fliG
著者Imada, K, Minamino, T, Kinoshita, M, Namba, K.
登録日2010-05-27
公開日2011-05-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insight into the rotational switching mechanism of the bacterial flagellar motor
Plos Biol., 9, 2011
2ZVZ
DownloadVisualize
BU of 2zvz by Molmil
Structure of the periplasmic domain of MotB from Salmonella (crystal form III)
分子名称: Chemotaxis protein motB
著者Imada, K, Kojima, S, Namba, K, Homma, S.
登録日2008-11-26
公開日2009-09-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Mol.Microbiol., 73, 2009
2ZF8
DownloadVisualize
BU of 2zf8 by Molmil
Crystal structure of MotY
分子名称: Component of sodium-driven polar flagellar motor
著者Imada, K, Kojima, S, Namba, K, Homma, M.
登録日2007-12-25
公開日2008-07-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Insights into the stator assembly of the Vibrio flagellar motor from the crystal structure of MotY
Proc.Natl.Acad.Sci.Usa, 105, 2008
2ZOV
DownloadVisualize
BU of 2zov by Molmil
Structure of the periplasmic domain of MotB from Salmonella (crystal form I)
分子名称: Chemotaxis protein motB
著者Imada, K, Kojima, S, Namba, K, Homma, M.
登録日2008-06-09
公開日2009-06-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Mol.Microbiol., 73, 2009
3ADY
DownloadVisualize
BU of 3ady by Molmil
Crystal structure of DotD from Legionella
分子名称: DotD
著者Imada, K, Nakano, N, Kubori, T, Kinoshita, M, Nagai, H.
登録日2010-01-29
公開日2010-11-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Legionella DotD: insights into the relationship between type IVB and type II/III secretion systems
Plos Pathog., 6, 2010
2D4U
DownloadVisualize
BU of 2d4u by Molmil
Crystal Structure of the ligand binding domain of the bacterial serine chemoreceptor Tsr
分子名称: Methyl-accepting chemotaxis protein I
著者Imada, K, Tajima, H, Namba, K, Sakuma, M, Homma, M, Kawagishi, I.
登録日2005-10-24
公開日2006-11-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Ligand specificity determined by differentially arranged common ligand-binding residues in the bacterial amino acid chemoreceptors Tsr and Tar.
J.Biol.Chem., 2011
3W0D
DownloadVisualize
BU of 3w0d by Molmil
Structure of elastase inhibitor AFUEI (cyrstal form I)
分子名称: Elastase inhibitor AFUEI
著者Imada, K, Sakuma, M, Okumura, Y, Ogawa, K, Nikai, T, Homma, M.
登録日2012-10-29
公開日2013-05-15
最終更新日2013-07-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献X-ray Structure Analysis and Characterization of AFUEI, an Elastase Inhibitor from Aspergillus fumigatus
J.Biol.Chem., 288, 2013
3W0E
DownloadVisualize
BU of 3w0e by Molmil
Structure of elastase inhibitor AFUEI (crystal form II)
分子名称: Elastase inhibitor AFUEI
著者Imada, K, Sakuma, M, Okumura, Y, Ogawa, K, Nikai, T, Homma, M.
登録日2012-10-29
公開日2013-05-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray Structure Analysis and Characterization of AFUEI, an Elastase Inhibitor from Aspergillus fumigatus
J.Biol.Chem., 288, 2013
3W1D
DownloadVisualize
BU of 3w1d by Molmil
Structure of a pressure sensitive YFP variant YFP-G3
分子名称: Green Fluorescent protein
著者Imada, K, Yoshizawa, K, Kinoshita, M, Watanabe, T.M.
登録日2012-11-14
公開日2013-10-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Plos One, 8, 2013
3W1C
DownloadVisualize
BU of 3w1c by Molmil
Structure of a pressure sensitive YFP variant YFP-G1
分子名称: Green Fluorescent protein
著者Imada, K, Yoshizawa, K, Kinoshita, M, Watanabe, T.M.
登録日2012-11-14
公開日2013-10-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Plos One, 8, 2013
5H72
DownloadVisualize
BU of 5h72 by Molmil
Structure of the periplasmic domain of FliP
分子名称: Flagellar biosynthetic protein FliP
著者Fukumura, T, Kawaguchi, T, Saijo-Hamano, Y, Namba, K, Minamino, T, Imada, K.
登録日2016-11-16
公開日2017-08-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Assembly and stoichiometry of the core structure of the bacterial flagellar type III export gate complex
PLoS Biol., 15, 2017
8GQY
DownloadVisualize
BU of 8gqy by Molmil
CryoEM structure of pentameric MotA from Aquifex aeolicus
分子名称: Motility protein A
著者Nishikino, T, Takekawa, N, Kishikawa, J, Hirose, M, Onoe, S, Kato, T, Imada, K.
登録日2022-08-31
公開日2022-10-26
最終更新日2022-11-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of MotA, a flagellar stator protein, from hyperthermophile.
Biochem.Biophys.Res.Commun., 631, 2022
1VGL
DownloadVisualize
BU of 1vgl by Molmil
Crystal structure of tetrameric KaiB from T.elongatus BP-1
分子名称: Circadian clock protein kaiB, MERCURY (II) ION
著者Iwase, R, Imada, K, Hayashi, F, Uzumaki, T, Namba, K, Ishiura, M.
登録日2004-04-27
公開日2005-08-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Functionally important substructures of circadian clock protein KaiB in a unique tetramer complex.
J.Biol.Chem., 280, 2005
8I4J
DownloadVisualize
BU of 8i4j by Molmil
Structure of wild-type Azami Green from Galaxea fascicularis
分子名称: Azami-Green
著者Otsubo, S, Takekawa, N, Imamura, H, Imada, K.
登録日2023-01-19
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Red fluorescent proteins engineered from green fluorescent proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023

 

1234>

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon