Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8C1V
DownloadVisualize
BU of 8c1v by Molmil
SARS-CoV-2 S-trimer (3 RBDs up) bound to TriSb92, fitted into cryo-EM map
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sb92, ...
Authors:Huiskonen, J.T, Rissanen, I, Hannula, L.
Deposit date:2022-12-21
Release date:2023-04-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Intranasal trimeric sherpabody inhibits SARS-CoV-2 including recent immunoevasive Omicron subvariants.
Nat Commun, 14, 2023
5OXE
DownloadVisualize
BU of 5oxe by Molmil
Structure of major capsid protein VP1 of Aeropyrum pernix bacilliform virus 1 APBV1
Descriptor: Major virion protein
Authors:Huiskonen, J.T, Ptchelkine, D, Phillpps, S.E.V.
Deposit date:2017-09-06
Release date:2017-11-22
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Unique architecture of thermophilic archaeal virus APBV1 and its genome packaging.
Nat Commun, 8, 2017
6GYN
DownloadVisualize
BU of 6gyn by Molmil
Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
Authors:Shintre, C.A, Pike, A.C.W, Tessitore, A, Young, M, Bushell, S.R, Strain-Damerell, C, Mukhopadhyay, S, Burgess-Brown, N.A, Huiskonen, J.T, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2018-06-30
Release date:2019-05-08
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel
To Be Published
6GYO
DownloadVisualize
BU of 6gyo by Molmil
Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel in complex with cAMP
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Shintre, C.A, Pike, A.C.W, Tessitore, A, Young, M, Bushell, S.R, Strain-Damerell, C, Mukhopadhyay, S, Burgess-Brown, N.A, Huiskonen, J.T, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2018-06-30
Release date:2019-05-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel
To Be Published
8A06
DownloadVisualize
BU of 8a06 by Molmil
Flavobacterium infecting lipid-containing phage FLiP penton protein
Descriptor: Penton protein P12
Authors:Rissanen, I, Huiskonen, J.T.
Deposit date:2022-05-26
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structure of ssDNA bacteriophage Phi CjT23 provides insight into early virus evolution.
Nat Commun, 13, 2022
8P0V
DownloadVisualize
BU of 8p0v by Molmil
Structure of the human Commander complex coiled coils, DENND10 and partial Retriever subcomplex
Descriptor: Coiled-coil domain-containing protein 22, Coiled-coil domain-containing protein 93, DENN domain-containing protein 10, ...
Authors:Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
Deposit date:2023-05-10
Release date:2024-03-20
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 2024
8P0X
DownloadVisualize
BU of 8p0x by Molmil
Structure of the human Commander complex Retriever Subcomplex
Descriptor: Coiled-coil domain-containing protein 22, Coiled-coil domain-containing protein 93, VPS35 endosomal protein-sorting factor-like, ...
Authors:Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
Deposit date:2023-05-11
Release date:2024-03-20
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 2024
8P0W
DownloadVisualize
BU of 8p0w by Molmil
Structure of the human Commander complex COMMD ring
Descriptor: COMM domain-containing protein 1, COMM domain-containing protein 10, COMM domain-containing protein 2, ...
Authors:Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
Deposit date:2023-05-11
Release date:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 2024
6HY0
DownloadVisualize
BU of 6hy0 by Molmil
Atomic models of P1, P4 C-terminal fragment and P8 fitted in the bacteriophage phi6 nucleocapsid reconstructed with icosahedral symmetry
Descriptor: Major Outer Capsid Protein P8, Major inner protein P1, Packaging Enzyme P4
Authors:El Omari, K, Ilca, S.L, Stuart, D.I, Huiskonen, J.T.
Deposit date:2018-10-18
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Multiple liquid crystalline geometries of highly compacted nucleic acid in a dsRNA virus.
Nature, 570, 2019
6J7V
DownloadVisualize
BU of 6j7v by Molmil
Structure of HRPV6 VP5 fitted in the cryoEM density of the spike
Descriptor: VP5
Authors:El Omari, K, Li, S, Huiskonen, J.T, Stuart, D.I.
Deposit date:2019-01-18
Release date:2019-03-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (16 Å)
Cite:The structure of a prokaryotic viral envelope protein expands the landscape of membrane fusion proteins.
Nat Commun, 10, 2019
7Q8B
DownloadVisualize
BU of 7q8b by Molmil
Leishmania major actin filament in ADP-Pi state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, MAGNESIUM ION, ...
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022
7Q8S
DownloadVisualize
BU of 7q8s by Molmil
Leishmania major ADP-actin filament decorated with Leishmania major cofilin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADF/Cofilin, Actin, ...
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022
7Q8C
DownloadVisualize
BU of 7q8c by Molmil
Leishmania major actin filament in ADP-state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, MAGNESIUM ION
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022
4BOM
DownloadVisualize
BU of 4bom by Molmil
Structure of herpesvirus fusion glycoprotein B-bilayer complex revealing the protein-membrane and lateral protein-protein interaction
Descriptor: ENVELOPE GLYCOPROTEIN B
Authors:Maurer, U.E, Zeev-Ben-Mordehai, Z, Pandurangan, A.P, Cairns, T.M, Hannah, B.P, Whitbeck, J.C, Eisenberg, R.J, Cohen, G.H, Topf, M, Huiskonen, J.T, Grunewald, K.
Deposit date:2013-05-21
Release date:2013-07-31
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (27 Å)
Cite:The structure of herpesvirus fusion glycoprotein B-bilayer complex reveals the protein-membrane and lateral protein-protein interaction.
Structure, 21, 2013
4C53
DownloadVisualize
BU of 4c53 by Molmil
Crystal Structure of Guanarito virus GP2 in the post-fusion conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PRE-GLYCOPROTEIN POLYPROTEIN GP COMPLEX, ...
Authors:Parsy, M, Huiskonen, J.T, Harlos, K, Bowden, T.A.
Deposit date:2013-09-10
Release date:2013-10-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.14 Å)
Cite:Crystal Structure of Venezuelan Hemorrhagic Fever Virus Fusion Glycoprotein Reveals a Class 1 Post-Fusion Architecture with Extensive Glycosylation.
J.Virol., 87, 2013
1YQ5
DownloadVisualize
BU of 1yq5 by Molmil
PRD1 vertex protein P5
Descriptor: Minor capsid protein
Authors:Merckel, M.C, Huiskonen, J.T, Goldman, A, Bamford, D.H, Tuma, R.
Deposit date:2005-02-01
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of the bacteriophage PRD1 spike sheds light on the evolution of viral capsid architecture.
Mol.Cell, 18, 2005
1YQ8
DownloadVisualize
BU of 1yq8 by Molmil
PRD1 vertex protein P5
Descriptor: Minor capsid protein
Authors:Merckel, M.C, Huiskonen, J.T, Goldman, A, Bamford, D.H, Tuma, R.
Deposit date:2005-02-01
Release date:2005-04-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure of the bacteriophage PRD1 spike sheds light on the evolution of viral capsid architecture.
Mol.Cell, 18, 2005
1YQ6
DownloadVisualize
BU of 1yq6 by Molmil
PRD1 vertex protein P5
Descriptor: Minor capsid protein
Authors:Merckel, M.C, Huiskonen, J.T, Goldman, A, Bamford, D.H, Tuma, R.
Deposit date:2005-02-01
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure of the bacteriophage PRD1 spike sheds light on the evolution of viral capsid architecture.
Mol.Cell, 18, 2005
8A05
DownloadVisualize
BU of 8a05 by Molmil
Bacteriophage phiCjT23 spike protein penton domain
Descriptor: Spike protein P13 N-terminal, capsid internal domain, Unknown vertex protein
Authors:Rissanen, I, Huiskonen, J.T.
Deposit date:2022-05-26
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of ssDNA bacteriophage Phi CjT23 provides insight into early virus evolution.
Nat Commun, 13, 2022
8A04
DownloadVisualize
BU of 8a04 by Molmil
Bacteriophage phiCjT23 major capsid protein trimer type 4
Descriptor: Major capsid protein P5
Authors:Rissanen, I, Kejzar, N, Huiskonen, J.T.
Deposit date:2022-05-26
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of ssDNA bacteriophage Phi CjT23 provides insight into early virus evolution.
Nat Commun, 13, 2022
7ZZZ
DownloadVisualize
BU of 7zzz by Molmil
Bacteriophage phiCjT23 capsid
Descriptor: Major capsid protein P5, Spike protein P13 N-terminal, capsid internal domain, ...
Authors:Rissanen, I, Kejzar, N, Huiskonen, J.T.
Deposit date:2022-05-26
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of ssDNA bacteriophage Phi CjT23 provides insight into early virus evolution.
Nat Commun, 13, 2022
8A02
DownloadVisualize
BU of 8a02 by Molmil
Bacteriophage phiCjT23 major capsid protein trimer type 2
Descriptor: Major capsid protein P5
Authors:Rissanen, I, Kejzar, N, Huiskonen, J.T.
Deposit date:2022-05-26
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of ssDNA bacteriophage Phi CjT23 provides insight into early virus evolution.
Nat Commun, 13, 2022
8A03
DownloadVisualize
BU of 8a03 by Molmil
Bacteriophage phiCjT23 major capsid protein trimer type 3
Descriptor: Major capsid protein P5
Authors:Rissanen, I, Kejzar, N, Huiskonen, J.T.
Deposit date:2022-05-26
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of ssDNA bacteriophage Phi CjT23 provides insight into early virus evolution.
Nat Commun, 13, 2022
8A01
DownloadVisualize
BU of 8a01 by Molmil
Bacteriophage phiCjT23 major capsid protein trimer type 1
Descriptor: Major capsid protein P5
Authors:Rissanen, I, Kejzar, N, Huiskonen, J.T.
Deposit date:2022-05-26
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of ssDNA bacteriophage Phi CjT23 provides insight into early virus evolution.
Nat Commun, 13, 2022
7ZTD
DownloadVisualize
BU of 7ztd by Molmil
Non-muscle F-actin decorated with non-muscle tropomyosin 3.2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Non-muscle tropomyosin 3.2, actin, ...
Authors:Selvaraj, M, Kokate, S, Kogan, K, Kotila, T, Kremneva, E, Lappalainen, P, Huiskonen, J.T.
Deposit date:2022-05-09
Release date:2023-01-11
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural basis underlying specific biochemical activities of non-muscle tropomyosin isoforms.
Cell Rep, 42, 2023

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon