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7BNA
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BU of 7bna by Molmil
ANISOTROPIC THERMAL-PARAMETER REFINEMENT OF THE DNA DODECAMER CGCGAATTCGCG BY THE SEGMENTED RIGID-BODY METHOD
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
著者Holbrook, S.R, Dickerson, R.E, Kim, S.-H.
登録日1985-01-07
公開日1985-07-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Anisotropic Thermal-Parameter Refinement of the DNA Dodecamer CGCGAATTCGCG by the Segmented Rigid-Body Method
Acta Crystallogr.,Sect.B, 41, 1985
255D
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BU of 255d by Molmil
CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF NON-WATSON-CRICK BASE PAIRS
分子名称: RNA (5'-R(*GP*GP*AP*CP*UP*UP*CP*GP*GP*UP*CP*C)-3')
著者Holbrook, S.R, Cheong, C, Tinoco Jr, I, Kim, S.-H.
登録日1993-12-21
公開日1995-02-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of an RNA double helix incorporating a track of non-Watson-Crick base pairs.
Nature, 353, 1991
6TNA
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BU of 6tna by Molmil
CRYSTAL STRUCTURE OF YEAST PHENYLALANINE T-RNA. I.CRYSTALLOGRAPHIC REFINEMENT
分子名称: MAGNESIUM ION, TRNAPHE
著者Sussman, J.L, Holbrook, S.R, Warrant, R.W, Church, G.M, Kim, S.-H.
登録日1978-11-16
公開日1979-01-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of yeast phenylalanine transfer RNA. I. Crystallographic refinement.
J.Mol.Biol., 123, 1978
2GHY
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BU of 2ghy by Molmil
Novel Crystal Form of the ColE1 Rom Protein
分子名称: Regulatory protein rop
著者Jang, S.B, Jeong, M.S, Carter, R.J, Holbrook, E.L, Comolli, L.R, Holbrook, S.R.
登録日2006-03-28
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Novel crystal form of the ColE1 Rom protein.
Acta Crystallogr.,Sect.D, 62, 2006
2G3S
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RNA structure containing GU base pairs
分子名称: 5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3', MAGNESIUM ION
著者Jang, S.B, Hung, L.W, Jeong, M.S, Holbrook, E.L, Chen, X, Turner, D.H, Holbrook, S.R.
登録日2006-02-20
公開日2007-01-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.499 Å)
主引用文献The crystal structure at 1.5 angstroms resolution of an RNA octamer duplex containing tandem G.U basepairs
Biophys.J., 90, 2006
333D
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BU of 333d by Molmil
THE CRYSTAL STRUCTURE OF AN RNA OLIGOMER INCORPORATING TANDEM ADENOSINE-INOSINE MISMATCHES
分子名称: CALCIUM ION, RNA (5'-R(*CP*GP*CP*AP*IP*GP*CP*G)-3')
著者Carter, R.J, Baeyens, K.J, SantaLucia Jr, J, Turner, D.H, Holbrook, S.R.
登録日1997-05-20
公開日1997-10-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献The crystal structure of an RNA oligomer incorporating tandem adenosine-inosine mismatches.
Nucleic Acids Res., 25, 1997
1SJY
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BU of 1sjy by Molmil
Crystal Structure of NUDIX HYDROLASE DR1025 FROM DEINOCOCCUS RADIODURANS
分子名称: MutT/nudix family protein
著者Ranatunga, W, Hill, E.E, Mooster, J.L, Holbrook, E.L, Schulze-Gahmen, U, Xu, W, Bessman, M.J, Brenner, S.E, Holbrook, S.R, Berkeley Structural Genomics Center (BSGC)
登録日2004-03-04
公開日2004-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Structural Studies of the Nudix Hydrolase DR1025 From Deinococcus radiodurans and its Ligand Complexes.
J.Mol.Biol., 339, 2004
1SU2
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CRYSTAL STRUCTURE OF THE NUDIX HYDROLASE DR1025 IN COMPLEX WITH ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MutT/nudix family protein
著者Ranatunga, W, Hill, E.E, Mooster, J.L, Holbrook, E.L, Schulze-Gahmen, U, Xu, W, Bessman, M.J, Brenner, S.E, Holbrook, S.R, Berkeley Structural Genomics Center (BSGC)
登録日2004-03-26
公開日2004-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Studies of the Nudix Hydrolase DR1025 From Deinococcus radiodurans and its Ligand Complexes.
J.Mol.Biol., 339, 2004
1SZ3
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CRYSTAL STRUCTURE OF NUDIX HYDROLASE DR1025 IN COMPLEXED WITH GNP AND MG+2
分子名称: MAGNESIUM ION, MutT/nudix family protein, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Ranatunga, W, Hill, E.E, Mooster, J.L, Holbrook, E.L, Schulze-Gahmen, U, Xu, W, Bessman, M.J, Brenner, S.E, Holbrook, S.R, Berkeley Structural Genomics Center (BSGC)
登録日2004-04-02
公開日2004-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Studies of the Nudix Hydrolase DR1025 From Deinococcus radiodurans and its Ligand Complexes.
J.Mol.Biol., 339, 2004
1SOI
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CRYSTAL STRUCTURE OF NUDIX HYDROLASE DR1025 IN COMPLEX WITH SM+3
分子名称: MutT/nudix family protein, SAMARIUM (III) ION
著者Ranatunga, W, Hill, E.E, Mooster, J.L, Holbrook, E.L, Schulze-Gahmen, U, Xu, W, Bessman, M.J, Brenner, S.E, Holbrook, S.R, Berkeley Structural Genomics Center (BSGC)
登録日2004-03-15
公開日2004-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Studies of the Nudix Hydrolase DR1025 From Deinococcus radiodurans and its Ligand Complexes.
J.Mol.Biol., 339, 2004
1Q27
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BU of 1q27 by Molmil
NMR Solution Structure of DR0079: An hypothetical Nudix protein from D. radiodurans
分子名称: Putative Nudix hydrolase DR0079
著者Buchko, G.W, Ni, S, Holbrook, S.R, Kennedy, M.A.
登録日2003-07-23
公開日2003-08-12
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of hypothetical Nudix hydrolase DR0079 from extremely radiation-resistant Deinococcus radiodurans bacterium
Proteins, 56, 2004
402D
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BU of 402d by Molmil
5'-R(*CP*GP*CP*CP*AP*GP*CP*G)-3'
分子名称: RNA(5'-R(*CP*GP*CP*CP*AP*GP*CP*G)-3')
著者Jang, S.B, Hung, L.-W, Chi, Y.-I, Holbrook, E.L, Carter, R, Holbrook, S.R.
登録日1998-06-04
公開日1998-06-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of an RNA internal loop consisting of tandem C-A+ base pairs.
Biochemistry, 37, 1998
1NZ0
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RNASE P PROTEIN FROM THERMOTOGA MARITIMA
分子名称: Ribonuclease P protein component, SULFATE ION
著者Kazantsev, A.V, Krivenko, A.A, Harrington, D.J, Carter, R.J, Holbrook, S.R, Adams, P.D, Pace, N.R, Berkeley Structural Genomics Center (BSGC)
登録日2003-02-14
公開日2003-06-24
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献High-resolution structure of RNase P protein from Thermotoga maritima.
Proc.Natl.Acad.Sci.USA, 100, 2003
205D
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STRUCTURE OF AN RNA DOUBLE HELIX INCLUDING URACIL-URACIL BASE PAIRS IN AN INTERNAL LOOP
分子名称: RNA (5'-R(*GP*GP*AP*CP*UP*UP*UP*GP*GP*UP*CP*C)-3')
著者Baeyens, K.J, De Bondt, H.L, Holbrook, S.R.
登録日1995-04-14
公開日1995-09-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structure of an RNA double helix including uracil-uracil base pairs in an internal loop.
Nat.Struct.Biol., 2, 1995
2A64
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Crystal Structure of Bacterial Ribonuclease P RNA
分子名称: ribonuclease P RNA
著者Kazantsev, A.V, Krivenko, A.A, Harrington, D.J, Holbrook, S.R, Adams, P.D, Pace, N.R.
登録日2005-07-01
公開日2005-09-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of a bacterial ribonuclease P RNA.
Proc.Natl.Acad.Sci.Usa, 102, 2005
283D
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BU of 283d by Molmil
A CURVED RNA HELIX INCORPORATING AN INTERNAL LOOP WITH G-A AND A-A NON-WATSON-CRICK BASE PAIRING
分子名称: MANGANESE (II) ION, RNA (5'-R(*GP*GP*CP*CP*GP*AP*AP*AP*GP*GP*CP*C)-3')
著者Baeyens, K.J, De Bondt, H.L, Pardi, A, Holbrook, S.R.
登録日1996-09-03
公開日1996-09-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A curved RNA helix incorporating an internal loop with G.A and A.A non-Watson-Crick base pairing.
Proc.Natl.Acad.Sci.USA, 93, 1996
1SA9
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BU of 1sa9 by Molmil
Crystal Structure of the RNA octamer GGCGAGCC
分子名称: 5'-R(*GP*GP*CP*GP*AP*GP*CP*C)-3'
著者Jang, S.B, Baeyens, K, Jeong, M.S, SantaLucia Jr, J, Turner, D, Holbrook, S.R.
登録日2004-02-09
公開日2004-05-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structures of two RNA octamers containing tandem G.A base pairs.
Acta Crystallogr.,Sect.D, 60, 2004
1SAQ
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Crystal Structure of the RNA octamer GIC(GA)GCC
分子名称: 5'-R(*GP*IP*CP*GP*AP*GP*CP*C)-3'
著者Jang, S.B, Baeyens, K, Jeong, M.S, SantaLucia Jr, J, Turner, D, Holbrook, S.R.
登録日2004-02-09
公開日2004-05-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structures of two RNA octamers containing tandem G.A base pairs.
Acta Crystallogr.,Sect.D, 60, 2004
1DUQ
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CRYSTAL STRUCTURE OF THE REV BINDING ELEMENT OF HIV-1
分子名称: SODIUM ION, THE REV BINDING ELEMENT
著者Hung, L.-W, Holbrook, E.L, Holbrook, S.R.
登録日2000-01-18
公開日2000-05-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of the Rev binding element of HIV-1 reveals novel base pairing and conformational variability.
Proc.Natl.Acad.Sci.USA, 97, 2000
4TRA
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BU of 4tra by Molmil
RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS
分子名称: MAGNESIUM ION, TRNAPHE
著者Westhof, E, Dumas, P, Moras, D.
登録日1987-11-06
公開日1987-11-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Restrained refinement of two crystalline forms of yeast aspartic acid and phenylalanine transfer RNA crystals.
Acta Crystallogr.,Sect.A, 44, 1988
1OSU
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STRUCTURE OF THE RNA HEXAMER, R(UUCGCG), WITH A 5'-UU-OVERHANG EXHIBITING HOOGSTEEN-LIKE TRANS U-U BASE PAIRS
分子名称: RNA (5'-R(*UP*UP*CP*GP*CP*G)-3')
著者Wahl, M.C, Rao, S.T, Sundaralingam, M.
登録日1995-11-08
公開日1996-04-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The structure of r(UUCGCG) has a 5'-UU-overhang exhibiting Hoogsteen-like trans U.U base pairs.
Nat.Struct.Biol., 3, 1996

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