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3DHQ
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BU of 3dhq by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS A90R at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Harms, M.J, Schlessman, J.L, Garcia-Moreno, E.B.
Deposit date:2008-06-18
Release date:2009-01-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Arginine residues at internal positions in a protein are always charged.
Proc.Natl.Acad.Sci.USA, 108, 2011
3D6C
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BU of 3d6c by Molmil
Crystal structure of Staphylococcal nuclease variant PHS L38E at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Harms, M.J, Schlessman, J.L, Sue, G.R, Garcia-Moreno, E.B.
Deposit date:2008-05-19
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:The pK(a) values of acidic and basic residues buried at the same internal location in a protein are governed by different factors.
J.Mol.Biol., 389, 2009
3D4W
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BU of 3d4w by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS A109R at cryogenic temperature
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, PHOSPHATE ION, Thermonuclease
Authors:Harms, M.J, Schlessman, J.L, Garcia-Moreno, E.B.
Deposit date:2008-05-15
Release date:2009-01-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Arginine residues at internal positions in a protein are always charged.
Proc.Natl.Acad.Sci.USA, 108, 2011
3D8G
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BU of 3d8g by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS I72R at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Harms, M.J, Schlessman, J.L, Garcia-Moreno, E.B.
Deposit date:2008-05-23
Release date:2009-01-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Arginine residues at internal positions in a protein are always charged.
Proc.Natl.Acad.Sci.USA, 108, 2011
2RKS
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BU of 2rks by Molmil
Crystal structure of Staphylococcal nuclease variant PHS L38K at cryogenic temperature
Descriptor: PHOSPHATE ION, Thermonuclease
Authors:Schlessman, J.L, Harms, M.J, Garcia-Moreno, E.B.
Deposit date:2007-10-17
Release date:2008-04-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A buried lysine that titrates with a normal pKa: role of conformational flexibility at the protein-water interface as a determinant of pKa values.
Protein Sci., 17, 2008
6WN7
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BU of 6wn7 by Molmil
Homo sapiens S100A5
Descriptor: CALCIUM ION, Protein S100-A5
Authors:Perkins, A, Harms, M.J, Wong, C.E, Wheeler, L.C.
Deposit date:2020-04-22
Release date:2020-09-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Learning peptide recognition rules for a low-specificity protein.
Protein Sci., 29, 2020
7UI5
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BU of 7ui5 by Molmil
Evolution avoids a pathological stabilizing interaction in the immune protein S100A9
Descriptor: CALCIUM ION, Protein S100-A9
Authors:Reardon, P.N, Harman, J.L, Costello, S.M, Warren, G.D, Phillips, S.R, Connor, P.J, Marqusee, S, Harms, M.J.
Deposit date:2022-03-28
Release date:2022-10-26
Method:SOLUTION NMR
Cite:Evolution avoids a pathological stabilizing interaction in the immune protein S100A9.
Proc.Natl.Acad.Sci.USA, 119, 2022
4LY7
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BU of 4ly7 by Molmil
Ancestral RNase H
Descriptor: Ribonuclease H, SULFATE ION
Authors:Hart, K.M, Harms, M.J, Schmidt, B.H, Elya, C, Thornton, J.W, Marqusee, S.
Deposit date:2013-07-30
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Thermodynamic system drift in protein evolution.
Plos Biol., 12, 2014
3HZX
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BU of 3hzx by Molmil
Crystal Structure of Staphylococcal nuclease variant D+PHS/V66K at pH 9 determined at 100 K
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Schlessman, J.L, De Luca-Westrate, J.N, Garcia-Moreno, B.E.
Deposit date:2009-06-24
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Staphylococcal nuclease D+PHS/V66K reveals internal hydration in protein cavity
To be Published
8VL8
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BU of 8vl8 by Molmil
Salmonella enterica Typhimurium taxis to serine and repellents (Tsr) ligand-binding domain with L-Ser, pH 7
Descriptor: CHLORIDE ION, Methyl-accepting chemotaxis protein, POTASSIUM ION, ...
Authors:Glenn, S, Baylink, A.
Deposit date:2024-01-11
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human Serum is a Potent Chemoattractant for Enterobacteriaceae Species Associated with Gastrointestinal Bleeding
eLife, 2024
4FNE
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BU of 4fne by Molmil
X-ray Crystal structure of the Ancestral 3-keto steroid receptor - DOC complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, DESOXYCORTICOSTERONE, ...
Authors:Ortlund, E.A, Colucci, J.K, Thornton, J, Eick, G, Harms, M.
Deposit date:2012-06-19
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Evolution of minimal specificity and promiscuity in steroid hormone receptors.
PLoS Genet, 8, 2012
6XHZ
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BU of 6xhz by Molmil
Alpha-lytic protease homolog N4
Descriptor: N4: hypothetical protein, SULFATE ION
Authors:Nixon, C.F, Marqusee, S.M, Gee, C.L.
Deposit date:2020-06-19
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Exploring the Evolutionary History of Kinetic Stability in the alpha-Lytic Protease Family.
Biochemistry, 60, 2021
4FN9
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BU of 4fn9 by Molmil
X-ray Crystal structure of the Ancestral 3-keto steroid receptor - Progesterone complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, GLYCEROL, ...
Authors:Colucci, J.K, Ortlund, E.A, Thornton, J.W.
Deposit date:2012-06-19
Release date:2012-12-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Evolution of minimal specificity and promiscuity in steroid hormone receptors.
PLoS Genet., 8, 2012

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